RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 RAD51AP2Q09MP3 1159 aa9.82□□□□□ -0.84
CBX3-206ENST00000481057 SGO2Q562F6 1265 aa9.82□□□□□ -0.84
CBX3-206ENST00000481057 FAM20CQ8IXL6 584 aa9.82□□□□□ -0.84
CBX3-206ENST00000481057 GATAD2BQ8WXI9 593 aa9.82□□□□□ -0.84
CBX3-206ENST00000481057 ELMO3Q96BJ8 720 aa9.82□□□□□ -0.84
CBX3-206ENST00000481057 SUPT16HQ9Y5B9 1047 aaKnown RBP9.82□□□□□ -0.84
CBX3-206ENST00000481057 CCNB3Q8WWL7 1395 aa9.82□□□□□ -0.84
CBX3-206ENST00000481057 DHX57Q6P158 1386 aaKnown RBP9.81□□□□□ -0.84
CBX3-206ENST00000481057 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.81□□□□□ -0.84
CBX3-206ENST00000481057 DHX15O43143 795 aaKnown RBP9.81□□□□□ -0.84
CBX3-206ENST00000481057 CILPO75339 1184 aa9.81□□□□□ -0.84
CBX3-206ENST00000481057 ASPAP45381 313 aa9.81□□□□□ -0.84
CBX3-206ENST00000481057 RPL6Q02878 288 aaKnown RBP9.81□□□□□ -0.84
CBX3-206ENST00000481057 RING1Q06587 406 aa9.81□□□□□ -0.84
CBX3-206ENST00000481057 FSTL1Q12841 308 aa9.81□□□□□ -0.84
CBX3-206ENST00000481057 CDPF1Q6NVV7 123 aa9.81□□□□□ -0.84
CBX3-206ENST00000481057 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.81□□□□□ -0.84
CBX3-206ENST00000481057 ZNF296Q8WUU4 475 aaPredicted RBP9.81□□□□□ -0.84
CBX3-206ENST00000481057 CSADQ9Y600 493 aa9.81□□□□□ -0.84
CBX3-206ENST00000481057 SNCAIPQ9Y6H5 919 aa9.81□□□□□ -0.84
CBX3-206ENST00000481057 XRN1Q8IZH2 1706 aaKnown RBP9.81□□□□□ -0.84
CBX3-206ENST00000481057 SPATA31A3Q5VYP0 1347 aa9.81□□□□□ -0.84
CBX3-206ENST00000481057 CCDC18Q5T9S5 1454 aa9.8□□□□□ -0.84
CBX3-206ENST00000481057 NRAPQ86VF7 1730 aa9.8□□□□□ -0.84
CBX3-206ENST00000481057 GREM1O60565 184 aa9.8□□□□□ -0.84
CBX3-206ENST00000481057 USP11P51784 963 aa9.8□□□□□ -0.84
CBX3-206ENST00000481057 TTLL4Q14679 1199 aa9.8□□□□□ -0.84
CBX3-206ENST00000481057 CYFIP1Q7L576 1253 aa9.8□□□□□ -0.84
CBX3-206ENST00000481057 HDXQ7Z353 690 aa9.8□□□□□ -0.84
CBX3-206ENST00000481057 C12orf40Q86WS4 652 aa9.8□□□□□ -0.84
CBX3-206ENST00000481057 KIAA0825Q8IV33 1275 aa9.8□□□□□ -0.84
CBX3-206ENST00000481057 ZNF654Q8IZM8 581 aa9.8□□□□□ -0.84
CBX3-206ENST00000481057 SPON2Q9BUD6 331 aa9.8□□□□□ -0.84
CBX3-206ENST00000481057 ACSS3Q9H6R3 686 aa9.8□□□□□ -0.84
CBX3-206ENST00000481057 SLC52A1Q9NWF4 448 aa9.8□□□□□ -0.84
CBX3-206ENST00000481057 GFRA2O00451 464 aa9.79□□□□□ -0.84
CBX3-206ENST00000481057 NEFMP07197 916 aa9.79□□□□□ -0.84
CBX3-206ENST00000481057 RAB6AP20340 208 aa9.79□□□□□ -0.84
CBX3-206ENST00000481057 MAP4P27816 1152 aaKnown RBP9.79□□□□□ -0.84
CBX3-206ENST00000481057 PPM1JQ5JR12 505 aa9.79□□□□□ -0.84
CBX3-206ENST00000481057 DIEXFQ68CQ4 756 aaKnown RBP9.79□□□□□ -0.84
CBX3-206ENST00000481057 PRR23CQ6ZRP0 262 aa9.79□□□□□ -0.84
CBX3-206ENST00000481057 NPM2Q86SE8 214 aaKnown RBP9.79□□□□□ -0.84
CBX3-206ENST00000481057 RNF214Q8ND24 703 aa9.79□□□□□ -0.84
CBX3-206ENST00000481057 EZH1Q92800 747 aaPredicted RBP9.79□□□□□ -0.84
CBX3-206ENST00000481057 YIPF2Q9BWQ6 316 aa9.79□□□□□ -0.84
CBX3-206ENST00000481057 TGIF2Q9GZN2 237 aa9.79□□□□□ -0.84
CBX3-206ENST00000481057 PIDD1Q9HB75 910 aa9.79□□□□□ -0.84
CBX3-206ENST00000481057 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.79□□□□□ -0.84
CBX3-206ENST00000481057 ARHGEF28Q8N1W1 1705 aaKnown RBP9.79□□□□□ -0.84
CBX3-206ENST00000481057 CCDC141Q6ZP82 1450 aa9.79□□□□□ -0.84
CBX3-206ENST00000481057 RGPD3A6NKT7 1758 aaPredicted RBP9.78□□□□□ -0.84
CBX3-206ENST00000481057 RGPD4Q7Z3J3 1758 aa9.78□□□□□ -0.84
CBX3-206ENST00000481057 BPNT1O95861 308 aa9.78□□□□□ -0.84
CBX3-206ENST00000481057 NTF4P34130 210 aa9.78□□□□□ -0.84
CBX3-206ENST00000481057 MPP2Q14168 576 aa9.78□□□□□ -0.84
CBX3-206ENST00000481057 RSPO4Q2I0M5 234 aaPredicted RBP9.78□□□□□ -0.84
CBX3-206ENST00000481057 NKAPLQ5M9Q1 402 aa9.78□□□□□ -0.84
CBX3-206ENST00000481057 FBXO27Q8NI29 283 aa9.78□□□□□ -0.84
CBX3-206ENST00000481057 FBLIM1Q8WUP2 373 aa9.78□□□□□ -0.84
CBX3-206ENST00000481057 LRRC3Q9BY71 257 aa9.78□□□□□ -0.84
CBX3-206ENST00000481057 NMRK2Q9NPI5 230 aa9.78□□□□□ -0.84
CBX3-206ENST00000481057 RAXQ9Y2V3 346 aa9.78□□□□□ -0.84
CBX3-206ENST00000481057 LRPPRCP42704 1394 aaKnown RBP9.77□□□□□ -0.84
CBX3-206ENST00000481057 PRAMEF27A3QJZ7 478 aa9.77□□□□□ -0.85
CBX3-206ENST00000481057 H2AFB1P0C5Y9 115 aa9.77□□□□□ -0.85
CBX3-206ENST00000481057 H2AFB2P0C5Z0 115 aa9.77□□□□□ -0.85
CBX3-206ENST00000481057 HCLS1P14317 486 aaPredicted RBP9.77□□□□□ -0.85
CBX3-206ENST00000481057 POLD1P28340 1107 aa9.77□□□□□ -0.85
CBX3-206ENST00000481057 ERCC5P28715 1186 aaPredicted RBP9.77□□□□□ -0.85
CBX3-206ENST00000481057 ZBTB37Q5TC79 503 aa9.77□□□□□ -0.85
CBX3-206ENST00000481057 BEND4Q6ZU67 534 aa9.77□□□□□ -0.85
CBX3-206ENST00000481057 C16orf71Q8IYS4 520 aaPredicted RBP9.77□□□□□ -0.85
CBX3-206ENST00000481057 KCNF1Q9H3M0 494 aa9.77□□□□□ -0.85
CBX3-206ENST00000481057 SEMA6CQ9H3T2 930 aa9.77□□□□□ -0.85
CBX3-206ENST00000481057 TACC3Q9Y6A5 838 aa9.77□□□□□ -0.85
CBX3-206ENST00000481057 PITPNM2Q9BZ72 1349 aa9.77□□□□□ -0.85
CBX3-206ENST00000481057 ROBO2Q9HCK4 1378 aa9.76□□□□□ -0.85
CBX3-206ENST00000481057 EIF2AK4Q9P2K8 1649 aaKnown RBP9.76□□□□□ -0.85
CBX3-206ENST00000481057 FANCGO15287 622 aa9.76□□□□□ -0.85
CBX3-206ENST00000481057 CRKP46108 304 aa9.76□□□□□ -0.85
CBX3-206ENST00000481057 REC114Q7Z4M0 266 aa9.76□□□□□ -0.85
CBX3-206ENST00000481057 CLEC10AQ8IUN9 316 aa9.76□□□□□ -0.85
CBX3-206ENST00000481057 ISL2Q96A47 359 aa9.76□□□□□ -0.85
CBX3-206ENST00000481057 EAF1Q96JC9 268 aaPredicted RBP9.76□□□□□ -0.85
CBX3-206ENST00000481057 NT5C1AQ9BXI3 368 aa9.76□□□□□ -0.85
CBX3-206ENST00000481057 PICK1Q9NRD5 415 aa9.76□□□□□ -0.85
CBX3-206ENST00000481057 UBP1Q9NZI7 540 aa9.76□□□□□ -0.85
CBX3-206ENST00000481057 MYO5BQ9ULV0 1848 aa9.76□□□□□ -0.85
CBX3-206ENST00000481057 TLR3O15455 904 aaKnown RBP9.75□□□□□ -0.85
CBX3-206ENST00000481057 CTCFP49711 727 aaPredicted RBP9.75□□□□□ -0.85
CBX3-206ENST00000481057 SMYD4Q8IYR2 804 aaPredicted RBP9.75□□□□□ -0.85
CBX3-206ENST00000481057 FAM83CQ9BQN1 747 aa9.75□□□□□ -0.85
CBX3-206ENST00000481057 C7orf69Q9H7B7 122 aa9.75□□□□□ -0.85
CBX3-206ENST00000481057 CCSER2Q9H7U1 834 aa9.75□□□□□ -0.85
CBX3-206ENST00000481057 TULP4Q9NRJ4 1543 aa9.74□□□□□ -0.85
CBX3-206ENST00000481057 FAM95CA0A1B0GW59 222 aa9.74□□□□□ -0.85
CBX3-206ENST00000481057 RNGTTO60942 597 aaKnown RBP9.74□□□□□ -0.85
CBX3-206ENST00000481057 NFICP08651 508 aa9.74□□□□□ -0.85
CBX3-206ENST00000481057 TSPY4P0CV99 314 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms