RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 MEIS3P2A8K0S8 358 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 GRIN3BO60391 1043 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 MT-CO1P00395 513 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 ASLP04424 464 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 JMJD7P0C870 316 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 ZKSCAN1P17029 563 aaPredicted RBP9.68□□□□□ -0.86
LSM5-210ENST00000480956 RXRGP48443 463 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 ALDH5A1P51649 535 aaPredicted RBP9.68□□□□□ -0.86
LSM5-210ENST00000480956 HSP90AA2PQ14568 343 aaPredicted RBP9.68□□□□□ -0.86
LSM5-210ENST00000480956 TAF11Q15544 211 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 TRIM61Q5EBN2 209 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 GIMAP8Q8ND71 665 aaPredicted RBP9.68□□□□□ -0.86
LSM5-210ENST00000480956 KIFC2Q96AC6 838 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 AARSD1Q9BTE6 412 aaKnown RBP9.68□□□□□ -0.86
LSM5-210ENST00000480956 EFCC1Q9HA90 598 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 AAASQ9NRG9 546 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 RASSF1Q9NS23 344 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 C1orf112Q9NSG2 853 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 LRRC4BQ9NT99 713 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 TRMT13Q9NUP7 481 aaKnown RBP9.68□□□□□ -0.86
LSM5-210ENST00000480956 TOR4AQ9NXH8 423 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 SALL4Q9UJQ4 1053 aa9.68□□□□□ -0.86
LSM5-210ENST00000480956 ATP13A4Q4VNC1 1196 aa9.67□□□□□ -0.86
LSM5-210ENST00000480956 PPP1R26Q5T8A7 1209 aaPredicted RBP9.67□□□□□ -0.86
LSM5-210ENST00000480956 C1orf122Q6ZSJ8 110 aa9.67□□□□□ -0.86
LSM5-210ENST00000480956 OTOP3Q7RTS5 596 aa9.67□□□□□ -0.86
LSM5-210ENST00000480956 BRAPQ7Z569 592 aa9.67□□□□□ -0.86
LSM5-210ENST00000480956 NLRP13Q86W25 1043 aa9.67□□□□□ -0.86
LSM5-210ENST00000480956 CCNJLQ8IV13 435 aa9.67□□□□□ -0.86
LSM5-210ENST00000480956 CHCHD4Q8N4Q1 142 aa9.67□□□□□ -0.86
LSM5-210ENST00000480956 TAB3Q8N5C8 712 aaPredicted RBP9.67□□□□□ -0.86
LSM5-210ENST00000480956 KIAA1958Q8N8K9 716 aa9.67□□□□□ -0.86
LSM5-210ENST00000480956 SLC12A5Q9H2X9 1139 aa9.67□□□□□ -0.86
LSM5-210ENST00000480956 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.67□□□□□ -0.86
LSM5-210ENST00000480956 GPN3Q9UHW5 284 aaPredicted RBP9.67□□□□□ -0.86
LSM5-210ENST00000480956 ISY1Q9ULR0 285 aaKnown RBP9.67□□□□□ -0.86
LSM5-210ENST00000480956 SLC4A7Q9Y6M7 1214 aa9.67□□□□□ -0.86
LSM5-210ENST00000480956 FLT3P36888 993 aa9.66□□□□□ -0.86
LSM5-210ENST00000480956 ZYXQ15942 572 aaKnown RBP9.66□□□□□ -0.86
LSM5-210ENST00000480956 TUBB8Q3ZCM7 444 aa9.66□□□□□ -0.86
LSM5-210ENST00000480956 SV2CQ496J9 727 aa9.66□□□□□ -0.86
LSM5-210ENST00000480956 MSL1Q68DK7 614 aa9.66□□□□□ -0.86
LSM5-210ENST00000480956 UNC5AQ6ZN44 842 aa9.66□□□□□ -0.86
LSM5-210ENST00000480956 PNMA8AQ86V59 439 aaPredicted RBP9.66□□□□□ -0.86
LSM5-210ENST00000480956 TMEM40Q8WWA1 233 aa9.66□□□□□ -0.86
LSM5-210ENST00000480956 PPM1MQ96MI6 270 aa9.66□□□□□ -0.86
LSM5-210ENST00000480956 NDOR1Q9UHB4 597 aa9.66□□□□□ -0.86
LSM5-210ENST00000480956 POLR3KQ9Y2Y1 108 aaPredicted RBP9.66□□□□□ -0.86
LSM5-210ENST00000480956 LTBP3Q9NS15 1303 aa9.66□□□□□ -0.86
LSM5-210ENST00000480956 LCE2BO14633 110 aa9.65□□□□□ -0.86
LSM5-210ENST00000480956 TGFB3P10600 412 aa9.65□□□□□ -0.86
LSM5-210ENST00000480956 HSD3B1P14060 373 aa9.65□□□□□ -0.86
LSM5-210ENST00000480956 SCNN1BP51168 640 aa9.65□□□□□ -0.86
LSM5-210ENST00000480956 CFAP100Q494V2 611 aa9.65□□□□□ -0.86
LSM5-210ENST00000480956 TMEM214Q6NUQ4 689 aaKnown RBP9.65□□□□□ -0.86
LSM5-210ENST00000480956 BTLAQ7Z6A9 289 aa9.65□□□□□ -0.86
LSM5-210ENST00000480956 CATIPQ7Z7H3 387 aa9.65□□□□□ -0.86
LSM5-210ENST00000480956 CCDC116Q8IYX3 515 aa9.65□□□□□ -0.86
LSM5-210ENST00000480956 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.65□□□□□ -0.86
LSM5-210ENST00000480956 C7orf43Q8WVR3 580 aa9.65□□□□□ -0.86
LSM5-210ENST00000480956 HSPBAP1Q96EW2 488 aa9.65□□□□□ -0.86
LSM5-210ENST00000480956 ZSCAN10Q96SZ4 725 aaPredicted RBP9.65□□□□□ -0.86
LSM5-210ENST00000480956 NUP88Q99567 741 aaPredicted RBP9.65□□□□□ -0.86
LSM5-210ENST00000480956 KIAA1586Q9HCI6 787 aa9.65□□□□□ -0.86
LSM5-210ENST00000480956 AFG3L2Q9Y4W6 797 aa9.65□□□□□ -0.86
LSM5-210ENST00000480956 SAMM50Q9Y512 469 aa9.65□□□□□ -0.86
LSM5-210ENST00000480956 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.65□□□□□ -0.86
LSM5-210ENST00000480956 hCG_1642624A0A1W2PR95 340 aa9.65□□□□□ -0.87
LSM5-210ENST00000480956 K7ENM7 598 aa9.65□□□□□ -0.87
LSM5-210ENST00000480956 K7ESF4 209 aa9.65□□□□□ -0.87
LSM5-210ENST00000480956 DDX3YO15523 660 aaKnown RBP9.65□□□□□ -0.87
LSM5-210ENST00000480956 TLR5O60602 858 aa9.65□□□□□ -0.87
LSM5-210ENST00000480956 CYP2E1P05181 493 aaPredicted RBP9.65□□□□□ -0.87
LSM5-210ENST00000480956 RHCEP18577 417 aa9.65□□□□□ -0.87
LSM5-210ENST00000480956 VCAM1P19320 739 aa9.65□□□□□ -0.87
LSM5-210ENST00000480956 GTF2E1P29083 439 aaPredicted RBP9.65□□□□□ -0.87
LSM5-210ENST00000480956 RHDQ02161 417 aa9.65□□□□□ -0.87
LSM5-210ENST00000480956 DUSP27Q5VZP5 1158 aa9.65□□□□□ -0.87
LSM5-210ENST00000480956 SLC7A14Q8TBB6 771 aa9.65□□□□□ -0.87
LSM5-210ENST00000480956 RHBDD1Q8TEB9 315 aa9.65□□□□□ -0.87
LSM5-210ENST00000480956 RSPH1Q8WYR4 309 aa9.65□□□□□ -0.87
LSM5-210ENST00000480956 CRB3Q9BUF7 120 aa9.65□□□□□ -0.87
LSM5-210ENST00000480956 OSBPL5Q9H0X9 879 aaPredicted RBP9.65□□□□□ -0.87
LSM5-210ENST00000480956 NMRK2Q9NPI5 230 aa9.65□□□□□ -0.87
LSM5-210ENST00000480956 FNIP2Q9P278 1114 aa9.65□□□□□ -0.87
LSM5-210ENST00000480956 M0R2C6 588 aa9.64□□□□□ -0.87
LSM5-210ENST00000480956 HSPA6P17066 643 aa9.64□□□□□ -0.87
LSM5-210ENST00000480956 ITPKAP23677 461 aa9.64□□□□□ -0.87
LSM5-210ENST00000480956 IGFALSP35858 605 aa9.64□□□□□ -0.87
LSM5-210ENST00000480956 USP14P54578 494 aa9.64□□□□□ -0.87
LSM5-210ENST00000480956 ZBED6P86452 979 aa9.64□□□□□ -0.87
LSM5-210ENST00000480956 CHST15Q7LFX5 561 aaPredicted RBP9.64□□□□□ -0.87
LSM5-210ENST00000480956 PTPN22Q9Y2R2 807 aa9.64□□□□□ -0.87
LSM5-210ENST00000480956 TLL2Q9Y6L7 1015 aa9.64□□□□□ -0.87
LSM5-210ENST00000480956 J3QL48 77 aa9.63□□□□□ -0.87
LSM5-210ENST00000480956 GRK6P43250 576 aa9.63□□□□□ -0.87
LSM5-210ENST00000480956 SLC7A5Q01650 507 aa9.63□□□□□ -0.87
LSM5-210ENST00000480956 RPL6Q02878 288 aaKnown RBP9.63□□□□□ -0.87
LSM5-210ENST00000480956 PCBP2Q15366 365 aaKnown RBP eCLIP9.63□□□□□ -0.87
LSM5-210ENST00000480956 NBPF1Q3BBV0 1214 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms