RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 WDR78Q5VTH9 848 aa20.2■□□□□ 0.82
HSPG2-209ENST00000480900 SHCBP1Q8NEM2 672 aa20.2■□□□□ 0.82
HSPG2-209ENST00000480900 ATG4CQ96DT6 458 aa20.2■□□□□ 0.82
HSPG2-209ENST00000480900 MOV10L1Q9BXT6 1211 aaKnown RBP20.2■□□□□ 0.82
HSPG2-209ENST00000480900 SPATC1LQ9H0A9 340 aa20.2■□□□□ 0.82
HSPG2-209ENST00000480900 PAK6Q9NQU5 681 aaPredicted RBP20.2■□□□□ 0.82
HSPG2-209ENST00000480900 CLIP2Q9UDT6 1046 aa20.2■□□□□ 0.82
HSPG2-209ENST00000480900 ADAMTS5Q9UNA0 930 aa20.2■□□□□ 0.82
HSPG2-209ENST00000480900 HIP1O00291 1037 aa20.19■□□□□ 0.82
HSPG2-209ENST00000480900 FGAP02671 866 aa20.19■□□□□ 0.82
HSPG2-209ENST00000480900 CAPN2P17655 700 aa20.19■□□□□ 0.82
HSPG2-209ENST00000480900 PDE4AP27815 886 aa20.19■□□□□ 0.82
HSPG2-209ENST00000480900 TFAP4Q01664 338 aa20.19■□□□□ 0.82
HSPG2-209ENST00000480900 MAP2K5Q13163 448 aa20.19■□□□□ 0.82
HSPG2-209ENST00000480900 PPP4R3BQ5MIZ7 849 aa20.19■□□□□ 0.82
HSPG2-209ENST00000480900 FAM83BQ5T0W9 1011 aa20.19■□□□□ 0.82
HSPG2-209ENST00000480900 U2AF1L4Q8WU68 220 aaKnown RBP20.19■□□□□ 0.82
HSPG2-209ENST00000480900 F5H6K3 240 aa20.18■□□□□ 0.82
HSPG2-209ENST00000480900 ORC4O43929 436 aa20.18■□□□□ 0.82
HSPG2-209ENST00000480900 NDUFB10O96000 172 aa20.18■□□□□ 0.82
HSPG2-209ENST00000480900 ZKSCAN1P17029 563 aaPredicted RBP20.18■□□□□ 0.82
HSPG2-209ENST00000480900 PTPREP23469 700 aa20.18■□□□□ 0.82
HSPG2-209ENST00000480900 KLRC3Q07444 240 aa20.18■□□□□ 0.82
HSPG2-209ENST00000480900 GRB14Q14449 540 aa20.18■□□□□ 0.82
HSPG2-209ENST00000480900 FAM47AQ5JRC9 791 aa20.18■□□□□ 0.82
HSPG2-209ENST00000480900 DIAPH3Q9NSV4 1193 aa20.18■□□□□ 0.82
HSPG2-209ENST00000480900 FBXO28Q9NVF7 368 aa20.18■□□□□ 0.82
HSPG2-209ENST00000480900 PPP1R9AQ9ULJ8 1098 aa20.18■□□□□ 0.82
HSPG2-209ENST00000480900 PLXNA1Q9UIW2 1896 aa20.18■□□□□ 0.82
HSPG2-209ENST00000480900 SGPL1O95470 568 aa20.17■□□□□ 0.82
HSPG2-209ENST00000480900 FGRP09769 529 aa20.17■□□□□ 0.82
HSPG2-209ENST00000480900 MAP3K21Q5TCX8 1036 aa20.17■□□□□ 0.82
HSPG2-209ENST00000480900 SAMD1Q6SPF0 538 aaPredicted RBP20.17■□□□□ 0.82
HSPG2-209ENST00000480900 GMCL1P1Q8NEA9 526 aa20.17■□□□□ 0.82
HSPG2-209ENST00000480900 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.17■□□□□ 0.82
HSPG2-209ENST00000480900 RPTORQ8N122 1335 aa20.17■□□□□ 0.82
HSPG2-209ENST00000480900 TSPY2A6NKD2 308 aa20.16■□□□□ 0.82
HSPG2-209ENST00000480900 VWA5AO00534 786 aa20.16■□□□□ 0.82
HSPG2-209ENST00000480900 STRNO43815 780 aa20.16■□□□□ 0.82
HSPG2-209ENST00000480900 HOXC6P09630 235 aa20.16■□□□□ 0.82
HSPG2-209ENST00000480900 ERCC3P19447 782 aa20.16■□□□□ 0.82
HSPG2-209ENST00000480900 TRIM32Q13049 653 aa20.16■□□□□ 0.82
HSPG2-209ENST00000480900 PLS1Q14651 629 aa20.16■□□□□ 0.82
HSPG2-209ENST00000480900 TTC22Q5TAA0 569 aa20.16■□□□□ 0.82
HSPG2-209ENST00000480900 PRPF38BQ5VTL8 546 aaKnown RBP20.16■□□□□ 0.82
HSPG2-209ENST00000480900 CWC27Q6UX04 472 aaKnown RBP20.16■□□□□ 0.82
HSPG2-209ENST00000480900 DEFB118Q96PH6 123 aa20.16■□□□□ 0.82
HSPG2-209ENST00000480900 NUP88Q99567 741 aaPredicted RBP20.16■□□□□ 0.82
HSPG2-209ENST00000480900 SLF1Q9BQI6 1058 aa20.16■□□□□ 0.82
HSPG2-209ENST00000480900 MROH8Q9H579 483 aa20.16■□□□□ 0.82
HSPG2-209ENST00000480900 HMX1Q9NP08 348 aaPredicted RBP20.16■□□□□ 0.82
HSPG2-209ENST00000480900 TACC3Q9Y6A5 838 aa20.16■□□□□ 0.82
HSPG2-209ENST00000480900 FRMPD3Q5JV73 1810 aa20.16■□□□□ 0.82
HSPG2-209ENST00000480900 PRKAR2AP13861 404 aaKnown RBP20.15■□□□□ 0.82
HSPG2-209ENST00000480900 TMEM132BQ14DG7 1078 aa20.15■□□□□ 0.82
HSPG2-209ENST00000480900 LRRC47Q8N1G4 583 aaKnown RBP20.15■□□□□ 0.82
HSPG2-209ENST00000480900 INCENPQ9NQS7 918 aa20.15■□□□□ 0.82
HSPG2-209ENST00000480900 RANBP6O60518 1105 aaKnown RBP20.14■□□□□ 0.81
HSPG2-209ENST00000480900 SLC25A27O95847 323 aa20.14■□□□□ 0.81
HSPG2-209ENST00000480900 PCP11498 1178 aaKnown RBP20.14■□□□□ 0.81
HSPG2-209ENST00000480900 CCL14Q16627 93 aa20.14■□□□□ 0.81
HSPG2-209ENST00000480900 UBE2Q1Q7Z7E8 422 aa20.14■□□□□ 0.81
HSPG2-209ENST00000480900 ABRAQ8N0Z2 381 aa20.14■□□□□ 0.81
HSPG2-209ENST00000480900 PRPF38AQ8NAV1 312 aaKnown RBP20.14■□□□□ 0.81
HSPG2-209ENST00000480900 REPS2Q8NFH8 660 aa20.14■□□□□ 0.81
HSPG2-209ENST00000480900 CRISPLD2Q9H0B8 497 aa20.14■□□□□ 0.81
HSPG2-209ENST00000480900 GSPT1P15170 499 aaKnown RBP20.13■□□□□ 0.81
HSPG2-209ENST00000480900 ADORA2AP29274 412 aa20.13■□□□□ 0.81
HSPG2-209ENST00000480900 COPB2P35606 906 aa20.13■□□□□ 0.81
HSPG2-209ENST00000480900 NCAPG2Q86XI2 1143 aa20.13■□□□□ 0.81
HSPG2-209ENST00000480900 RIOX2Q8IUF8 465 aa20.13■□□□□ 0.81
HSPG2-209ENST00000480900 IL17RBQ9NRM6 502 aa20.13■□□□□ 0.81
HSPG2-209ENST00000480900 FEM1BQ9UK73 627 aa20.13■□□□□ 0.81
HSPG2-209ENST00000480900 ZNF214Q9UL59 606 aaPredicted RBP20.13■□□□□ 0.81
HSPG2-209ENST00000480900 FARP2O94887 1054 aaPredicted RBP20.12■□□□□ 0.81
HSPG2-209ENST00000480900 TFRCP02786 760 aaKnown RBP20.12■□□□□ 0.81
HSPG2-209ENST00000480900 STAT3P40763 770 aa20.12■□□□□ 0.81
HSPG2-209ENST00000480900 NOVP48745 357 aa20.12■□□□□ 0.81
HSPG2-209ENST00000480900 HAND2P61296 217 aa20.12■□□□□ 0.81
HSPG2-209ENST00000480900 CACNB2Q08289 660 aaPredicted RBP20.12■□□□□ 0.81
HSPG2-209ENST00000480900 SLFN13Q68D06 897 aa20.12■□□□□ 0.81
HSPG2-209ENST00000480900 STAG1Q8WVM7 1258 aa20.12■□□□□ 0.81
HSPG2-209ENST00000480900 NBPF3Q9H094 633 aa20.12■□□□□ 0.81
HSPG2-209ENST00000480900 TOMM22Q9NS69 142 aa20.12■□□□□ 0.81
HSPG2-209ENST00000480900 STX8Q9UNK0 236 aa20.12■□□□□ 0.81
HSPG2-209ENST00000480900 NMT2O60551 498 aa20.11■□□□□ 0.81
HSPG2-209ENST00000480900 BMP3P12645 472 aa20.11■□□□□ 0.81
HSPG2-209ENST00000480900 AKNAD1Q5T1N1 836 aa20.11■□□□□ 0.81
HSPG2-209ENST00000480900 MFSD14CQ5VZR4 134 aa20.11■□□□□ 0.81
HSPG2-209ENST00000480900 DPP9Q86TI2 863 aa20.11■□□□□ 0.81
HSPG2-209ENST00000480900 NPLOC4Q8TAT6 608 aa20.11■□□□□ 0.81
HSPG2-209ENST00000480900 GMCL1Q96IK5 515 aa20.11■□□□□ 0.81
HSPG2-209ENST00000480900 DSCC1Q9BVC3 393 aa20.11■□□□□ 0.81
HSPG2-209ENST00000480900 SLC5A4Q9NY91 659 aa20.11■□□□□ 0.81
HSPG2-209ENST00000480900 FLRT1Q9NZU1 646 aa20.11■□□□□ 0.81
HSPG2-209ENST00000480900 IGHA2P01877 340 aa20.1■□□□□ 0.81
HSPG2-209ENST00000480900 FCER1AP12319 257 aa20.1■□□□□ 0.81
HSPG2-209ENST00000480900 RRP12Q5JTH9 1297 aaKnown RBP20.1■□□□□ 0.81
HSPG2-209ENST00000480900 MFSD6Q6ZSS7 791 aa20.1■□□□□ 0.81
HSPG2-209ENST00000480900 TBC1D10CQ8IV04 446 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms