RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 BTNL9Q6UXG8 535 aa19.59■□□□□ 0.73
SCAMP3-207ENST00000480219 STAG2Q8N3U4 1231 aa19.59■□□□□ 0.73
SCAMP3-207ENST00000480219 SRBD1Q8N5C6 995 aaKnown RBP19.59■□□□□ 0.73
SCAMP3-207ENST00000480219 RNF26Q9BY78 433 aaPredicted RBP19.59■□□□□ 0.73
SCAMP3-207ENST00000480219 SMC3Q9UQE7 1217 aa19.59■□□□□ 0.73
SCAMP3-207ENST00000480219 ZHX2Q9Y6X8 837 aa19.59■□□□□ 0.73
SCAMP3-207ENST00000480219 JAK2O60674 1132 aa19.58■□□□□ 0.72
SCAMP3-207ENST00000480219 FMNL1O95466 1100 aaPredicted RBP19.58■□□□□ 0.72
SCAMP3-207ENST00000480219 HSP90AA1P07900 732 aaKnown RBP19.58■□□□□ 0.72
SCAMP3-207ENST00000480219 FDPSP14324 419 aaKnown RBP19.58■□□□□ 0.72
SCAMP3-207ENST00000480219 SPP2Q13103 211 aa19.58■□□□□ 0.72
SCAMP3-207ENST00000480219 PPIL2Q13356 520 aa19.58■□□□□ 0.72
SCAMP3-207ENST00000480219 SLC35G1Q2M3R5 365 aa19.58■□□□□ 0.72
SCAMP3-207ENST00000480219 RASGRP2Q7LDG7 609 aa19.58■□□□□ 0.72
SCAMP3-207ENST00000480219 C2orf69Q8N8R5 385 aa19.58■□□□□ 0.72
SCAMP3-207ENST00000480219 CLMNQ96JQ2 1002 aa19.58■□□□□ 0.72
SCAMP3-207ENST00000480219 RIOX1Q9H6W3 641 aa19.58■□□□□ 0.72
SCAMP3-207ENST00000480219 KCNH4Q9UQ05 1017 aa19.58■□□□□ 0.72
SCAMP3-207ENST00000480219 PTPRFP10586 1907 aa19.57■□□□□ 0.72
SCAMP3-207ENST00000480219 KLRF2D3W0D1 207 aa19.57■□□□□ 0.72
SCAMP3-207ENST00000480219 UBE2Q2LH0YL09 131 aa19.57■□□□□ 0.72
SCAMP3-207ENST00000480219 CXCL11O14625 94 aa19.57■□□□□ 0.72
SCAMP3-207ENST00000480219 WDR46O15213 610 aaKnown RBP19.57■□□□□ 0.72
SCAMP3-207ENST00000480219 BMP3P12645 472 aa19.57■□□□□ 0.72
SCAMP3-207ENST00000480219 YY1P25490 414 aa19.57■□□□□ 0.72
SCAMP3-207ENST00000480219 SLC1A4P43007 532 aa19.57■□□□□ 0.72
SCAMP3-207ENST00000480219 FSTL1Q12841 308 aa19.57■□□□□ 0.72
SCAMP3-207ENST00000480219 TTLL12Q14166 644 aaPredicted RBP19.57■□□□□ 0.72
SCAMP3-207ENST00000480219 EMILIN3Q9NT22 766 aa19.57■□□□□ 0.72
SCAMP3-207ENST00000480219 RBM27Q9P2N5 1060 aaKnown RBP19.57■□□□□ 0.72
SCAMP3-207ENST00000480219 LOC285556D6RIA3 1793 aa19.57■□□□□ 0.72
SCAMP3-207ENST00000480219 PRPF3O43395 683 aaKnown RBP19.56■□□□□ 0.72
SCAMP3-207ENST00000480219 CYTH3O43739 400 aa19.56■□□□□ 0.72
SCAMP3-207ENST00000480219 PDIA4P13667 645 aaKnown RBP19.56■□□□□ 0.72
SCAMP3-207ENST00000480219 GJB2P29033 226 aa19.56■□□□□ 0.72
SCAMP3-207ENST00000480219 ZNF784Q8NCA9 323 aaPredicted RBP19.56■□□□□ 0.72
SCAMP3-207ENST00000480219 MTMR8Q96EF0 704 aa19.56■□□□□ 0.72
SCAMP3-207ENST00000480219 FEZ1Q99689 392 aa19.56■□□□□ 0.72
SCAMP3-207ENST00000480219 ELP3Q9H9T3 547 aa19.56■□□□□ 0.72
SCAMP3-207ENST00000480219 CIZ1Q9ULV3 898 aaPredicted RBP19.56■□□□□ 0.72
SCAMP3-207ENST00000480219 MTMR2Q13614 643 aa19.55■□□□□ 0.72
SCAMP3-207ENST00000480219 ZNF408Q9H9D4 720 aa19.55■□□□□ 0.72
SCAMP3-207ENST00000480219 KIF3AQ9Y496 699 aa19.55■□□□□ 0.72
SCAMP3-207ENST00000480219 A0A0G2JLL6 359 aaPredicted RBP19.54■□□□□ 0.72
SCAMP3-207ENST00000480219 DEXIO95424 95 aa19.54■□□□□ 0.72
SCAMP3-207ENST00000480219 GOLGA8HP0CJ92 632 aa19.54■□□□□ 0.72
SCAMP3-207ENST00000480219 SSRP1Q08945 709 aaKnown RBP19.54■□□□□ 0.72
SCAMP3-207ENST00000480219 PRRT2Q7Z6L0 340 aaPredicted RBP19.54■□□□□ 0.72
SCAMP3-207ENST00000480219 TRIM22Q8IYM9 498 aa19.54■□□□□ 0.72
SCAMP3-207ENST00000480219 CNKSR2Q8WXI2 1034 aa19.54■□□□□ 0.72
SCAMP3-207ENST00000480219 PHKBQ93100 1093 aa19.54■□□□□ 0.72
SCAMP3-207ENST00000480219 ORC3Q9UBD5 711 aaPredicted RBP19.54■□□□□ 0.72
SCAMP3-207ENST00000480219 FRMPD2Q68DX3 1309 aaPredicted RBP19.53■□□□□ 0.72
SCAMP3-207ENST00000480219 IRF6O14896 467 aa19.53■□□□□ 0.72
SCAMP3-207ENST00000480219 VCAM1P19320 739 aa19.53■□□□□ 0.72
SCAMP3-207ENST00000480219 PDCP20941 246 aa19.53■□□□□ 0.72
SCAMP3-207ENST00000480219 GJA5P36382 358 aa19.53■□□□□ 0.72
SCAMP3-207ENST00000480219 PKN1Q16512 942 aa19.53■□□□□ 0.72
SCAMP3-207ENST00000480219 CCDC96Q2M329 555 aa19.53■□□□□ 0.72
SCAMP3-207ENST00000480219 KCTD1Q719H9 257 aa19.53■□□□□ 0.72
SCAMP3-207ENST00000480219 FAM160B2Q86V87 743 aa19.53■□□□□ 0.72
SCAMP3-207ENST00000480219 FAM177A1Q8N128 213 aaPredicted RBP19.53■□□□□ 0.72
SCAMP3-207ENST00000480219 CMTR1Q8N1G2 835 aaKnown RBP19.53■□□□□ 0.72
SCAMP3-207ENST00000480219 SPRYD3Q8NCJ5 442 aa19.53■□□□□ 0.72
SCAMP3-207ENST00000480219 OPTNQ96CV9 577 aa19.53■□□□□ 0.72
SCAMP3-207ENST00000480219 SLC10A4Q96EP9 437 aa19.53■□□□□ 0.72
SCAMP3-207ENST00000480219 FOXD4L1Q9NU39 408 aa19.53■□□□□ 0.72
SCAMP3-207ENST00000480219 TRIM75PA6NK02 468 aa19.52■□□□□ 0.72
SCAMP3-207ENST00000480219 FAM83BQ5T0W9 1011 aa19.52■□□□□ 0.72
SCAMP3-207ENST00000480219 TTBK2Q6IQ55 1244 aa19.52■□□□□ 0.72
SCAMP3-207ENST00000480219 SPICE1Q8N0Z3 855 aa19.52■□□□□ 0.72
SCAMP3-207ENST00000480219 PROCA1Q8NCQ7 364 aaPredicted RBP19.52■□□□□ 0.72
SCAMP3-207ENST00000480219 WASF1Q92558 559 aa19.52■□□□□ 0.72
SCAMP3-207ENST00000480219 NUP88Q99567 741 aaPredicted RBP19.52■□□□□ 0.72
SCAMP3-207ENST00000480219 SLC26A6Q9BXS9 759 aa19.52■□□□□ 0.72
SCAMP3-207ENST00000480219 GPCPD1Q9NPB8 672 aa19.52■□□□□ 0.72
SCAMP3-207ENST00000480219 FEM1BQ9UK73 627 aa19.52■□□□□ 0.72
SCAMP3-207ENST00000480219 MTMR7Q9Y216 660 aa19.52■□□□□ 0.72
SCAMP3-207ENST00000480219 ZBTB48P10074 688 aaPredicted RBP19.51■□□□□ 0.71
SCAMP3-207ENST00000480219 STAT2P52630 851 aa19.51■□□□□ 0.71
SCAMP3-207ENST00000480219 HMGCS2P54868 508 aa19.51■□□□□ 0.71
SCAMP3-207ENST00000480219 MOGSQ13724 837 aa19.51■□□□□ 0.71
SCAMP3-207ENST00000480219 ZYXQ15942 572 aaKnown RBP19.51■□□□□ 0.71
SCAMP3-207ENST00000480219 PFKFB3Q16875 520 aaPredicted RBP19.51■□□□□ 0.71
SCAMP3-207ENST00000480219 SAPCD2Q86UD0 394 aa19.51■□□□□ 0.71
SCAMP3-207ENST00000480219 ADGRF4Q8IZF3 695 aa19.51■□□□□ 0.71
SCAMP3-207ENST00000480219 CHURC1Q8WUH1 139 aa19.51■□□□□ 0.71
SCAMP3-207ENST00000480219 DDX11Q96FC9 970 aa19.51■□□□□ 0.71
SCAMP3-207ENST00000480219 OTUD5Q96G74 571 aa19.51■□□□□ 0.71
SCAMP3-207ENST00000480219 WNK4Q96J92 1243 aa19.51■□□□□ 0.71
SCAMP3-207ENST00000480219 HHIPL1Q96JK4 782 aa19.51■□□□□ 0.71
SCAMP3-207ENST00000480219 JMJD4Q9H9V9 463 aa19.51■□□□□ 0.71
SCAMP3-207ENST00000480219 TLL2Q9Y6L7 1015 aa19.51■□□□□ 0.71
SCAMP3-207ENST00000480219 V9GY48 417 aaPredicted RBP19.51■□□□□ 0.71
SCAMP3-207ENST00000480219 PARP14Q460N5 1801 aa19.51■□□□□ 0.71
SCAMP3-207ENST00000480219 MYPNQ86TC9 1320 aa19.51■□□□□ 0.71
SCAMP3-207ENST00000480219 TMEM232C9JQI7 657 aa19.5■□□□□ 0.71
SCAMP3-207ENST00000480219 SYT1P21579 422 aa19.5■□□□□ 0.71
SCAMP3-207ENST00000480219 SYDE2Q5VT97 1194 aa19.5■□□□□ 0.71
SCAMP3-207ENST00000480219 FAM184AQ8NB25 1140 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms