RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 DSG3P32926 999 aa8.52□□□□□ -1.05
COL17A1-205ENST00000480127 PLS1Q14651 629 aa8.52□□□□□ -1.05
COL17A1-205ENST00000480127 SIAH1Q8IUQ4 282 aa8.52□□□□□ -1.05
COL17A1-205ENST00000480127 ABRAQ8N0Z2 381 aa8.52□□□□□ -1.05
COL17A1-205ENST00000480127 RNPC3Q96LT9 517 aaKnown RBP8.52□□□□□ -1.05
COL17A1-205ENST00000480127 LRRCC1Q9C099 1032 aa8.52□□□□□ -1.05
COL17A1-205ENST00000480127 BOLA2Q9H3K6 86 aa8.52□□□□□ -1.05
COL17A1-205ENST00000480127 MROH8Q9H579 483 aa8.52□□□□□ -1.05
COL17A1-205ENST00000480127 SH2D4AQ9H788 454 aa8.52□□□□□ -1.05
COL17A1-205ENST00000480127 CTDP1Q9Y5B0 961 aaPredicted RBP8.52□□□□□ -1.05
COL17A1-205ENST00000480127 ZNF532Q9HCE3 1301 aa8.52□□□□□ -1.05
COL17A1-205ENST00000480127 VCANP13611 3396 aa8.52□□□□□ -1.05
COL17A1-205ENST00000480127 DNAH12Q6ZR08 3092 aa8.51□□□□□ -1.05
COL17A1-205ENST00000480127 PGK1P00558 417 aa8.51□□□□□ -1.05
COL17A1-205ENST00000480127 RAG1P15918 1043 aa8.51□□□□□ -1.05
COL17A1-205ENST00000480127 TAL1P17542 331 aaPredicted RBP8.51□□□□□ -1.05
COL17A1-205ENST00000480127 LRRFIP1Q32MZ4 808 aaKnown RBP8.51□□□□□ -1.05
COL17A1-205ENST00000480127 TJAP1Q5JTD0 557 aa8.51□□□□□ -1.05
COL17A1-205ENST00000480127 NCAPG2Q86XI2 1143 aa8.51□□□□□ -1.05
COL17A1-205ENST00000480127 MB21D1Q8N884 522 aa8.51□□□□□ -1.05
COL17A1-205ENST00000480127 ATG4CQ96DT6 458 aa8.51□□□□□ -1.05
COL17A1-205ENST00000480127 ARHGEF10LQ9HCE6 1279 aa8.51□□□□□ -1.05
COL17A1-205ENST00000480127 XPNPEP3Q9NQH7 507 aa8.51□□□□□ -1.05
COL17A1-205ENST00000480127 SLC5A4Q9NY91 659 aa8.51□□□□□ -1.05
COL17A1-205ENST00000480127 NRBP1Q9UHY1 535 aa8.51□□□□□ -1.05
COL17A1-205ENST00000480127 LAMA2P24043 3122 aaKnown RBP8.5□□□□□ -1.05
COL17A1-205ENST00000480127 EYSQ5T1H1 3165 aa8.5□□□□□ -1.05
COL17A1-205ENST00000480127 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.5□□□□□ -1.05
COL17A1-205ENST00000480127 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.5□□□□□ -1.05
COL17A1-205ENST00000480127 A0A1W2PQ45 241 aaPredicted RBP8.5□□□□□ -1.05
COL17A1-205ENST00000480127 A0A1W2PQY0 241 aa8.5□□□□□ -1.05
COL17A1-205ENST00000480127 TNFRSF10AO00220 468 aa8.5□□□□□ -1.05
COL17A1-205ENST00000480127 PQBP1O60828 265 aaKnown RBP8.5□□□□□ -1.05
COL17A1-205ENST00000480127 MBD4O95243 580 aa8.5□□□□□ -1.05
COL17A1-205ENST00000480127 APPP05067 770 aa8.5□□□□□ -1.05
COL17A1-205ENST00000480127 ZNF865P0CJ78 1059 aaPredicted RBP8.5□□□□□ -1.05
COL17A1-205ENST00000480127 RARBP10826 455 aa8.5□□□□□ -1.05
COL17A1-205ENST00000480127 FCER1AP12319 257 aa8.5□□□□□ -1.05
COL17A1-205ENST00000480127 COL9A1P20849 921 aa8.5□□□□□ -1.05
COL17A1-205ENST00000480127 DNAJB2P25686 324 aa8.5□□□□□ -1.05
COL17A1-205ENST00000480127 FPGSQ05932 587 aa8.5□□□□□ -1.05
COL17A1-205ENST00000480127 FAAP100Q0VG06 881 aa8.5□□□□□ -1.05
COL17A1-205ENST00000480127 TMEM132BQ14DG7 1078 aa8.5□□□□□ -1.05
COL17A1-205ENST00000480127 ANKRD33Q7Z3H0 272 aa8.5□□□□□ -1.05
COL17A1-205ENST00000480127 RNF180Q86T96 592 aa8.5□□□□□ -1.05
COL17A1-205ENST00000480127 CLEC10AQ8IUN9 316 aa8.5□□□□□ -1.05
COL17A1-205ENST00000480127 SLC44A5Q8NCS7 719 aa8.5□□□□□ -1.05
COL17A1-205ENST00000480127 SDR42E1Q8WUS8 393 aa8.5□□□□□ -1.05
COL17A1-205ENST00000480127 ZNF576Q9H609 170 aa8.5□□□□□ -1.05
COL17A1-205ENST00000480127 ARMT1Q9H993 441 aa8.5□□□□□ -1.05
COL17A1-205ENST00000480127 ADAMTS5Q9UNA0 930 aa8.5□□□□□ -1.05
COL17A1-205ENST00000480127 TMX2Q9Y320 296 aa8.5□□□□□ -1.05
COL17A1-205ENST00000480127 ROBO3Q96MS0 1386 aa8.49□□□□□ -1.05
COL17A1-205ENST00000480127 ADAMTS4O75173 837 aa8.49□□□□□ -1.05
COL17A1-205ENST00000480127 FLOT1O75955 427 aa8.49□□□□□ -1.05
COL17A1-205ENST00000480127 SLC25A27O95847 323 aa8.49□□□□□ -1.05
COL17A1-205ENST00000480127 PGK2P07205 417 aa8.49□□□□□ -1.05
COL17A1-205ENST00000480127 CYP2D6P10635 497 aa8.49□□□□□ -1.05
COL17A1-205ENST00000480127 SLC4A3P48751 1232 aa8.49□□□□□ -1.05
COL17A1-205ENST00000480127 ICA1Q05084 483 aa8.49□□□□□ -1.05
COL17A1-205ENST00000480127 ZNF792Q3KQV3 632 aa8.49□□□□□ -1.05
COL17A1-205ENST00000480127 TMEM179Q6ZVK1 233 aa8.49□□□□□ -1.05
COL17A1-205ENST00000480127 C16orf59Q7L2K0 433 aa8.49□□□□□ -1.05
COL17A1-205ENST00000480127 SPICE1Q8N0Z3 855 aa8.49□□□□□ -1.05
COL17A1-205ENST00000480127 STK11IPQ8N1F8 1099 aa8.49□□□□□ -1.05
COL17A1-205ENST00000480127 LCORLQ8N3X6 602 aa8.49□□□□□ -1.05
COL17A1-205ENST00000480127 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.49□□□□□ -1.05
COL17A1-205ENST00000480127 LENG1Q96BZ8 264 aaPredicted RBP8.49□□□□□ -1.05
COL17A1-205ENST00000480127 TIFAQ96CG3 184 aa8.49□□□□□ -1.05
COL17A1-205ENST00000480127 TOX2Q96NM4 488 aa8.49□□□□□ -1.05
COL17A1-205ENST00000480127 MMP19Q99542 508 aa8.49□□□□□ -1.05
COL17A1-205ENST00000480127 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.49□□□□□ -1.05
COL17A1-205ENST00000480127 TINF2Q9BSI4 451 aa8.49□□□□□ -1.05
COL17A1-205ENST00000480127 VCPKMTQ9H867 229 aa8.49□□□□□ -1.05
COL17A1-205ENST00000480127 MKNK2Q9HBH9 465 aa8.49□□□□□ -1.05
COL17A1-205ENST00000480127 ATP8A2Q9NTI2 1148 aa8.49□□□□□ -1.05
COL17A1-205ENST00000480127 ZBTB40Q9NUA8 1239 aa8.49□□□□□ -1.05
COL17A1-205ENST00000480127 TMEM39AQ9NV64 488 aa8.49□□□□□ -1.05
COL17A1-205ENST00000480127 SWAP70Q9UH65 585 aa8.49□□□□□ -1.05
COL17A1-205ENST00000480127 DIS3Q9Y2L1 958 aaKnown RBP8.49□□□□□ -1.05
COL17A1-205ENST00000480127 SLC4A4Q9Y6R1 1079 aa8.49□□□□□ -1.05
COL17A1-205ENST00000480127 TTC28Q96AY4 2481 aa8.49□□□□□ -1.05
COL17A1-205ENST00000480127 SMIM22K7EJ46 135 aa8.48□□□□□ -1.05
COL17A1-205ENST00000480127 WDR46O15213 610 aaKnown RBP8.48□□□□□ -1.05
COL17A1-205ENST00000480127 SMARCA5O60264 1052 aaPredicted RBP8.48□□□□□ -1.05
COL17A1-205ENST00000480127 TIMP1P01033 207 aa8.48□□□□□ -1.05
COL17A1-205ENST00000480127 AKR1A1P14550 325 aa8.48□□□□□ -1.05
COL17A1-205ENST00000480127 AKR1B1P15121 316 aa8.48□□□□□ -1.05
COL17A1-205ENST00000480127 PBX2P40425 430 aa8.48□□□□□ -1.05
COL17A1-205ENST00000480127 TDO2P48775 406 aa8.48□□□□□ -1.05
COL17A1-205ENST00000480127 ACLYP53396 1101 aa8.48□□□□□ -1.05
COL17A1-205ENST00000480127 RASIP1Q5U651 963 aa8.48□□□□□ -1.05
COL17A1-205ENST00000480127 CCSAPQ6IQ19 270 aaPredicted RBP8.48□□□□□ -1.05
COL17A1-205ENST00000480127 RIOX2Q8IUF8 465 aa8.48□□□□□ -1.05
COL17A1-205ENST00000480127 KLHDC9Q8NEP7 349 aa8.48□□□□□ -1.05
COL17A1-205ENST00000480127 DYNLL2Q96FJ2 89 aa8.48□□□□□ -1.05
COL17A1-205ENST00000480127 YTHDC1Q96MU7 727 aaKnown RBP8.48□□□□□ -1.05
COL17A1-205ENST00000480127 TSEN34Q9BSV6 310 aaKnown RBP8.48□□□□□ -1.05
COL17A1-205ENST00000480127 ZNF287Q9HBT7 754 aa8.48□□□□□ -1.05
COL17A1-205ENST00000480127 GOPCQ9HD26 462 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms