RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 GREB1LQ9C091 1923 aaPredicted RBP13.07□□□□□ -0.32
CLDN11-205ENST00000480067 TESPA1A2RU30 521 aaPredicted RBP13.07□□□□□ -0.32
CLDN11-205ENST00000480067 USP17L15C9J2P7 530 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 USP17L13C9JLJ4 530 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 USP17L11C9JVI0 530 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 USP17L18D6R9N7 530 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 USP17L22D6RA61 530 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 USP17L17D6RBQ6 530 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 USP17L19D6RCP7 530 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 USP17L20D6RJB6 530 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 DDAH1O94760 285 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 PARP1P09874 1014 aaKnown RBP13.07□□□□□ -0.32
CLDN11-205ENST00000480067 EVCP57679 992 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 USP17L24Q0WX57 530 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 MOGSQ13724 837 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 CCDC96Q2M329 555 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 FAM83BQ5T0W9 1011 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 TREML2Q5T2D2 321 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 APOA5Q6Q788 366 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 KCTD1Q719H9 257 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 MICU3Q86XE3 530 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 CTCFLQ8NI51 663 aaPredicted RBP13.07□□□□□ -0.32
CLDN11-205ENST00000480067 ZIC5Q96T25 663 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 MYL10Q9BUA6 226 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 TANGO6Q9C0B7 1094 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 RPAP3Q9H6T3 665 aaPredicted RBP13.07□□□□□ -0.32
CLDN11-205ENST00000480067 GOLGA8BA8MQT2 603 aa13.06□□□□□ -0.32
CLDN11-205ENST00000480067 BTBD19C9JJ37 291 aa13.06□□□□□ -0.32
CLDN11-205ENST00000480067 SNHG28P0DPA3 235 aa13.06□□□□□ -0.32
CLDN11-205ENST00000480067 KIF5BP33176 963 aa13.06□□□□□ -0.32
CLDN11-205ENST00000480067 TM4SF4P48230 202 aa13.06□□□□□ -0.32
CLDN11-205ENST00000480067 IKQ13123 557 aaPredicted RBP13.06□□□□□ -0.32
CLDN11-205ENST00000480067 GPATCH4Q5T3I0 446 aaKnown RBP13.06□□□□□ -0.32
CLDN11-205ENST00000480067 GPAT2Q6NUI2 795 aa13.06□□□□□ -0.32
CLDN11-205ENST00000480067 NOL8Q76FK4 1167 aaKnown RBP13.06□□□□□ -0.32
CLDN11-205ENST00000480067 CCDC144CPQ8IYA2 1237 aa13.06□□□□□ -0.32
CLDN11-205ENST00000480067 FANCBQ8NB91 859 aa13.06□□□□□ -0.32
CLDN11-205ENST00000480067 ZNF274Q96GC6 653 aaPredicted RBP13.06□□□□□ -0.32
CLDN11-205ENST00000480067 MAP3K14Q99558 947 aa13.06□□□□□ -0.32
CLDN11-205ENST00000480067 PTPN18Q99952 460 aa13.06□□□□□ -0.32
CLDN11-205ENST00000480067 TPCN1Q9ULQ1 816 aa13.06□□□□□ -0.32
CLDN11-205ENST00000480067 LIMCH1Q9UPQ0 1083 aa13.06□□□□□ -0.32
CLDN11-205ENST00000480067 FRMPD2Q68DX3 1309 aaPredicted RBP13.06□□□□□ -0.32
CLDN11-205ENST00000480067 TMEM232C9JQI7 657 aa13.05□□□□□ -0.32
CLDN11-205ENST00000480067 PDHXO00330 501 aa13.05□□□□□ -0.32
CLDN11-205ENST00000480067 FLOT1O75955 427 aa13.05□□□□□ -0.32
CLDN11-205ENST00000480067 GOLGA8HP0CJ92 632 aa13.05□□□□□ -0.32
CLDN11-205ENST00000480067 RXRAP19793 462 aa13.05□□□□□ -0.32
CLDN11-205ENST00000480067 OSBPP22059 807 aa13.05□□□□□ -0.32
CLDN11-205ENST00000480067 PDIA3P30101 505 aaKnown RBP13.05□□□□□ -0.32
CLDN11-205ENST00000480067 HOXA7P31268 230 aaPredicted RBP13.05□□□□□ -0.32
CLDN11-205ENST00000480067 MCM2P49736 904 aa13.05□□□□□ -0.32
CLDN11-205ENST00000480067 METAP2P50579 478 aaKnown RBP eCLIP13.05□□□□□ -0.32
CLDN11-205ENST00000480067 RCAN1P53805 252 aa13.05□□□□□ -0.32
CLDN11-205ENST00000480067 IRX3P78415 501 aaPredicted RBP13.05□□□□□ -0.32
CLDN11-205ENST00000480067 ZNF543Q08ER8 600 aa13.05□□□□□ -0.32
CLDN11-205ENST00000480067 ASPRV1Q53RT3 343 aa13.05□□□□□ -0.32
CLDN11-205ENST00000480067 CATSPERGQ6ZRH7 1159 aa13.05□□□□□ -0.32
CLDN11-205ENST00000480067 ANKRD23Q86SG2 305 aa13.05□□□□□ -0.32
CLDN11-205ENST00000480067 RAB11FIP4Q86YS3 637 aa13.05□□□□□ -0.32
CLDN11-205ENST00000480067 IFNL1Q8IU54 200 aa13.05□□□□□ -0.32
CLDN11-205ENST00000480067 CHURC1Q8WUH1 139 aa13.05□□□□□ -0.32
CLDN11-205ENST00000480067 GPCPD1Q9NPB8 672 aa13.05□□□□□ -0.32
CLDN11-205ENST00000480067 HOXC10Q9NYD6 342 aa13.05□□□□□ -0.32
CLDN11-205ENST00000480067 FEM1BQ9UK73 627 aa13.05□□□□□ -0.32
CLDN11-205ENST00000480067 CCDC196A0A1B0GTZ2 297 aa13.04□□□□□ -0.32
CLDN11-205ENST00000480067 GOLGA8AA7E2F4 631 aa13.04□□□□□ -0.32
CLDN11-205ENST00000480067 GNAQP50148 359 aa13.04□□□□□ -0.32
CLDN11-205ENST00000480067 STAT2P52630 851 aa13.04□□□□□ -0.32
CLDN11-205ENST00000480067 COG2Q14746 738 aa13.04□□□□□ -0.32
CLDN11-205ENST00000480067 GRM4Q14833 912 aa13.04□□□□□ -0.32
CLDN11-205ENST00000480067 PPP2R5BQ15173 497 aa13.04□□□□□ -0.32
CLDN11-205ENST00000480067 SAMD1Q6SPF0 538 aaPredicted RBP13.04□□□□□ -0.32
CLDN11-205ENST00000480067 RASGRP2Q7LDG7 609 aa13.04□□□□□ -0.32
CLDN11-205ENST00000480067 FAM43AQ8N2R8 423 aa13.04□□□□□ -0.32
CLDN11-205ENST00000480067 SLKQ9H2G2 1235 aaPredicted RBP13.04□□□□□ -0.32
CLDN11-205ENST00000480067 MAD2L2Q9UI95 211 aa13.04□□□□□ -0.32
CLDN11-205ENST00000480067 PNMA3Q9UL41 463 aa13.04□□□□□ -0.32
CLDN11-205ENST00000480067 SLC45A1Q9Y2W3 748 aa13.04□□□□□ -0.32
CLDN11-205ENST00000480067 PHIPQ8WWQ0 1821 aa13.04□□□□□ -0.32
CLDN11-205ENST00000480067 PALM3A6NDB9 673 aaPredicted RBP13.03□□□□□ -0.32
CLDN11-205ENST00000480067 KLRF2D3W0D1 207 aa13.03□□□□□ -0.32
CLDN11-205ENST00000480067 IGF2BP3O00425 579 aaKnown RBP eCLIP13.03□□□□□ -0.32
CLDN11-205ENST00000480067 STK3Q13188 491 aa13.03□□□□□ -0.32
CLDN11-205ENST00000480067 RTN1Q16799 776 aa13.03□□□□□ -0.32
CLDN11-205ENST00000480067 TTBK2Q6IQ55 1244 aa13.03□□□□□ -0.32
CLDN11-205ENST00000480067 FAM160B2Q86V87 743 aa13.03□□□□□ -0.32
CLDN11-205ENST00000480067 PRPF38AQ8NAV1 312 aaKnown RBP13.03□□□□□ -0.32
CLDN11-205ENST00000480067 KIFC2Q96AC6 838 aa13.03□□□□□ -0.32
CLDN11-205ENST00000480067 ASCC2Q9H1I8 757 aaPredicted RBP13.03□□□□□ -0.32
CLDN11-205ENST00000480067 ZCCHC17Q9NP64 241 aaKnown RBP13.03□□□□□ -0.32
CLDN11-205ENST00000480067 RBM28Q9NW13 759 aaKnown RBP13.03□□□□□ -0.32
CLDN11-205ENST00000480067 PLA2G6O60733 806 aa13.03□□□□□ -0.32
CLDN11-205ENST00000480067 ALDH1A1P00352 501 aa13.03□□□□□ -0.32
CLDN11-205ENST00000480067 SLC16A2P36021 539 aa13.03□□□□□ -0.32
CLDN11-205ENST00000480067 CCT2P78371 535 aaKnown RBP13.03□□□□□ -0.32
CLDN11-205ENST00000480067 STAG2Q8N3U4 1231 aa13.03□□□□□ -0.32
CLDN11-205ENST00000480067 SMCR8Q8TEV9 937 aaPredicted RBP13.03□□□□□ -0.32
CLDN11-205ENST00000480067 ZSCAN31Q96LW9 406 aaPredicted RBP13.03□□□□□ -0.32
CLDN11-205ENST00000480067 SLF1Q9BQI6 1058 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms