RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 TMX2Q9Y320 296 aa11.28□□□□□ -0.6
CD46-214ENST00000480003 CYP46A1Q9Y6A2 500 aa11.28□□□□□ -0.6
CD46-214ENST00000480003 PAPPA2Q9BXP8 1791 aa11.27□□□□□ -0.61
CD46-214ENST00000480003 RASSF10A6NK89 507 aa11.27□□□□□ -0.61
CD46-214ENST00000480003 FAM155AB1AL88 458 aaPredicted RBP11.27□□□□□ -0.61
CD46-214ENST00000480003 C19orf81C9J6K1 198 aa11.27□□□□□ -0.61
CD46-214ENST00000480003 IFIT3O14879 490 aaKnown RBP11.27□□□□□ -0.61
CD46-214ENST00000480003 IRF6O14896 467 aa11.27□□□□□ -0.61
CD46-214ENST00000480003 HSPA1AP0DMV8 641 aaKnown RBP11.27□□□□□ -0.61
CD46-214ENST00000480003 HSPA1BP0DMV9 641 aaKnown RBP11.27□□□□□ -0.61
CD46-214ENST00000480003 BACE1P56817 501 aa11.27□□□□□ -0.61
CD46-214ENST00000480003 EVCP57679 992 aa11.27□□□□□ -0.61
CD46-214ENST00000480003 ICA1Q05084 483 aa11.27□□□□□ -0.61
CD46-214ENST00000480003 SPP2Q13103 211 aa11.27□□□□□ -0.61
CD46-214ENST00000480003 SPRYD7Q5W111 196 aa11.27□□□□□ -0.61
CD46-214ENST00000480003 CLEC10AQ8IUN9 316 aa11.27□□□□□ -0.61
CD46-214ENST00000480003 ZNF280CQ8ND82 737 aa11.27□□□□□ -0.61
CD46-214ENST00000480003 OPTNQ96CV9 577 aa11.27□□□□□ -0.61
CD46-214ENST00000480003 WNK4Q96J92 1243 aa11.27□□□□□ -0.61
CD46-214ENST00000480003 TMEM47Q9BQJ4 181 aa11.27□□□□□ -0.61
CD46-214ENST00000480003 LRRC2Q9BYS8 371 aa11.27□□□□□ -0.61
CD46-214ENST00000480003 UPF3BQ9BZI7 483 aaKnown RBP11.27□□□□□ -0.61
CD46-214ENST00000480003 AS3MTQ9HBK9 375 aa11.27□□□□□ -0.61
CD46-214ENST00000480003 SENP2Q9HC62 589 aa11.27□□□□□ -0.61
CD46-214ENST00000480003 SYNPO2Q9UMS6 1093 aa11.27□□□□□ -0.61
CD46-214ENST00000480003 USP17L10C9JJH3 530 aa11.26□□□□□ -0.61
CD46-214ENST00000480003 SH2B2O14492 632 aaPredicted RBP11.26□□□□□ -0.61
CD46-214ENST00000480003 TOP1P11387 765 aaKnown RBP11.26□□□□□ -0.61
CD46-214ENST00000480003 ECE1P42892 770 aa11.26□□□□□ -0.61
CD46-214ENST00000480003 ZNF157P51786 506 aaPredicted RBP11.26□□□□□ -0.61
CD46-214ENST00000480003 NEK4P51957 841 aa11.26□□□□□ -0.61
CD46-214ENST00000480003 TOB2Q14106 344 aaPredicted RBP11.26□□□□□ -0.61
CD46-214ENST00000480003 DEFB115Q30KQ5 88 aa11.26□□□□□ -0.61
CD46-214ENST00000480003 KIAA1755Q5JYT7 1200 aa11.26□□□□□ -0.61
CD46-214ENST00000480003 Q6ZUG5 572 aa11.26□□□□□ -0.61
CD46-214ENST00000480003 SGMS1Q86VZ5 419 aa11.26□□□□□ -0.61
CD46-214ENST00000480003 CCDC102AQ96A19 550 aa11.26□□□□□ -0.61
CD46-214ENST00000480003 TCEANC2Q96MN5 208 aa11.26□□□□□ -0.61
CD46-214ENST00000480003 UBAC1Q9BSL1 405 aa11.26□□□□□ -0.61
CD46-214ENST00000480003 KIAA1683Q9H0B3 1180 aa11.26□□□□□ -0.61
CD46-214ENST00000480003 LY9Q9HBG7 655 aa11.26□□□□□ -0.61
CD46-214ENST00000480003 EMILIN3Q9NT22 766 aa11.26□□□□□ -0.61
CD46-214ENST00000480003 PDRG1Q9NUG6 133 aa11.26□□□□□ -0.61
CD46-214ENST00000480003 TNKSO95271 1327 aa11.26□□□□□ -0.61
CD46-214ENST00000480003 LAMB1P07942 1786 aa11.26□□□□□ -0.61
CD46-214ENST00000480003 LAMA4Q16363 1823 aa11.25□□□□□ -0.61
CD46-214ENST00000480003 TESPA1A2RU30 521 aaPredicted RBP11.25□□□□□ -0.61
CD46-214ENST00000480003 SLC10A3P09131 477 aa11.25□□□□□ -0.61
CD46-214ENST00000480003 ZBTB48P10074 688 aaPredicted RBP11.25□□□□□ -0.61
CD46-214ENST00000480003 MOGSQ13724 837 aa11.25□□□□□ -0.61
CD46-214ENST00000480003 WTAPQ15007 396 aa11.25□□□□□ -0.61
CD46-214ENST00000480003 SART3Q15020 963 aaKnown RBP11.25□□□□□ -0.61
CD46-214ENST00000480003 RABEP1Q15276 862 aa11.25□□□□□ -0.61
CD46-214ENST00000480003 TMEM67Q5HYA8 995 aa11.25□□□□□ -0.61
CD46-214ENST00000480003 RASAL3Q86YV0 1011 aa11.25□□□□□ -0.61
CD46-214ENST00000480003 C12orf42Q96LP6 360 aa11.25□□□□□ -0.61
CD46-214ENST00000480003 VCPKMTQ9H867 229 aa11.25□□□□□ -0.61
CD46-214ENST00000480003 ARHGEF10LQ9HCE6 1279 aa11.25□□□□□ -0.61
CD46-214ENST00000480003 ABT1Q9ULW3 272 aaKnown RBP11.25□□□□□ -0.61
CD46-214ENST00000480003 GREB1LQ9C091 1923 aaPredicted RBP11.25□□□□□ -0.61
CD46-214ENST00000480003 A0A0G2JLL6 359 aaPredicted RBP11.24□□□□□ -0.61
CD46-214ENST00000480003 ERICH2A1L162 156 aa11.24□□□□□ -0.61
CD46-214ENST00000480003 F5H6K3 240 aa11.24□□□□□ -0.61
CD46-214ENST00000480003 SNHG28P0DPA3 235 aa11.24□□□□□ -0.61
CD46-214ENST00000480003 USP14P54578 494 aa11.24□□□□□ -0.61
CD46-214ENST00000480003 KLRC3Q07444 240 aa11.24□□□□□ -0.61
CD46-214ENST00000480003 TROAPQ12815 778 aa11.24□□□□□ -0.61
CD46-214ENST00000480003 IFIT1BQ5T764 474 aaKnown RBP11.24□□□□□ -0.61
CD46-214ENST00000480003 USP17L2Q6R6M4 530 aa11.24□□□□□ -0.61
CD46-214ENST00000480003 PRRT2Q7Z6L0 340 aaPredicted RBP11.24□□□□□ -0.61
CD46-214ENST00000480003 GMCL1P1Q8NEA9 526 aa11.24□□□□□ -0.61
CD46-214ENST00000480003 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.24□□□□□ -0.61
CD46-214ENST00000480003 BRPF3Q9ULD4 1205 aa11.24□□□□□ -0.61
CD46-214ENST00000480003 STX8Q9UNK0 236 aa11.24□□□□□ -0.61
CD46-214ENST00000480003 TRIM75PA6NK02 468 aa11.23□□□□□ -0.61
CD46-214ENST00000480003 GTF2A2P52657 109 aa11.23□□□□□ -0.61
CD46-214ENST00000480003 ATP2B2Q01814 1243 aa11.23□□□□□ -0.61
CD46-214ENST00000480003 SNAPC2Q13487 334 aa11.23□□□□□ -0.61
CD46-214ENST00000480003 MTMR2Q13614 643 aa11.23□□□□□ -0.61
CD46-214ENST00000480003 SLFN13Q68D06 897 aa11.23□□□□□ -0.61
CD46-214ENST00000480003 GPAT2Q6NUI2 795 aa11.23□□□□□ -0.61
CD46-214ENST00000480003 PROCA1Q8NCQ7 364 aaPredicted RBP11.23□□□□□ -0.61
CD46-214ENST00000480003 PNMA1Q8ND90 353 aa11.23□□□□□ -0.61
CD46-214ENST00000480003 BRF1Q92994 677 aa11.23□□□□□ -0.61
CD46-214ENST00000480003 RNF166Q96A37 237 aaPredicted RBP11.23□□□□□ -0.61
CD46-214ENST00000480003 ZNF274Q96GC6 653 aaPredicted RBP11.23□□□□□ -0.61
CD46-214ENST00000480003 ZIC5Q96T25 663 aa11.23□□□□□ -0.61
CD46-214ENST00000480003 MAP3K14Q99558 947 aa11.23□□□□□ -0.61
CD46-214ENST00000480003 SH2D4AQ9H788 454 aa11.23□□□□□ -0.61
CD46-214ENST00000480003 NDUFB10O96000 172 aa11.22□□□□□ -0.61
CD46-214ENST00000480003 HOXA7P31268 230 aaPredicted RBP11.22□□□□□ -0.61
CD46-214ENST00000480003 TM4SF4P48230 202 aa11.22□□□□□ -0.61
CD46-214ENST00000480003 AK2P54819 239 aa11.22□□□□□ -0.61
CD46-214ENST00000480003 HMGCS2P54868 508 aa11.22□□□□□ -0.61
CD46-214ENST00000480003 INHBEP58166 350 aa11.22□□□□□ -0.61
CD46-214ENST00000480003 APOBRQ0VD83 1088 aa11.22□□□□□ -0.61
CD46-214ENST00000480003 DGKZQ13574 1117 aa11.22□□□□□ -0.61
CD46-214ENST00000480003 CYP4F22Q6NT55 531 aa11.22□□□□□ -0.61
CD46-214ENST00000480003 FASTKD5Q7L8L6 764 aaKnown RBP11.22□□□□□ -0.61
CD46-214ENST00000480003 BRI3BPQ8WY22 251 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms