RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 FAM110CQ1W6H9 321 aa29.35■■■□□ 2.29
PERM1-203ENST00000479361 DCAF4Q8WV16 495 aa29.35■■■□□ 2.29
PERM1-203ENST00000479361 ISY1Q9ULR0 285 aaKnown RBP29.35■■■□□ 2.29
PERM1-203ENST00000479361 SPDYE16A6NNV3 312 aaPredicted RBP29.34■■■□□ 2.29
PERM1-203ENST00000479361 HMGB1P09429 215 aaKnown RBP29.34■■■□□ 2.29
PERM1-203ENST00000479361 KIF22Q14807 665 aa29.34■■■□□ 2.29
PERM1-203ENST00000479361 SEC23AQ15436 765 aa29.34■■■□□ 2.29
PERM1-203ENST00000479361 PNMA1Q8ND90 353 aa29.34■■■□□ 2.29
PERM1-203ENST00000479361 FEM1BQ9UK73 627 aa29.34■■■□□ 2.29
PERM1-203ENST00000479361 PRC1O43663 620 aa29.33■■■□□ 2.29
PERM1-203ENST00000479361 DSG3P32926 999 aa29.33■■■□□ 2.29
PERM1-203ENST00000479361 ARHGEF6Q15052 776 aa29.33■■■□□ 2.29
PERM1-203ENST00000479361 TMEM67Q5HYA8 995 aa29.33■■■□□ 2.29
PERM1-203ENST00000479361 CHST3Q7LGC8 479 aa29.33■■■□□ 2.29
PERM1-203ENST00000479361 MB21D1Q8N884 522 aa29.33■■■□□ 2.29
PERM1-203ENST00000479361 TMEM87BQ96K49 555 aa29.33■■■□□ 2.29
PERM1-203ENST00000479361 MORF4L1Q9UBU8 362 aa29.33■■■□□ 2.29
PERM1-203ENST00000479361 MTMR7Q9Y216 660 aa29.33■■■□□ 2.29
PERM1-203ENST00000479361 RABGAP1Q9Y3P9 1069 aa29.33■■■□□ 2.29
PERM1-203ENST00000479361 SNX14Q9Y5W7 946 aa29.33■■■□□ 2.29
PERM1-203ENST00000479361 ANTXR2P58335 489 aa29.32■■■□□ 2.28
PERM1-203ENST00000479361 LACTBP83111 547 aaPredicted RBP29.32■■■□□ 2.28
PERM1-203ENST00000479361 WTAPQ15007 396 aa29.32■■■□□ 2.28
PERM1-203ENST00000479361 GPRC5AQ8NFJ5 357 aa29.32■■■□□ 2.28
PERM1-203ENST00000479361 SLF1Q9BQI6 1058 aa29.32■■■□□ 2.28
PERM1-203ENST00000479361 FBXO28Q9NVF7 368 aa29.32■■■□□ 2.28
PERM1-203ENST00000479361 PPP1R9AQ9ULJ8 1098 aa29.32■■■□□ 2.28
PERM1-203ENST00000479361 STAT2P52630 851 aa29.31■■■□□ 2.28
PERM1-203ENST00000479361 CCDC96Q2M329 555 aa29.31■■■□□ 2.28
PERM1-203ENST00000479361 ADCK5Q3MIX3 580 aa29.31■■■□□ 2.28
PERM1-203ENST00000479361 C8orf34Q49A92 452 aa29.31■■■□□ 2.28
PERM1-203ENST00000479361 SAMD1Q6SPF0 538 aaPredicted RBP29.31■■■□□ 2.28
PERM1-203ENST00000479361 PRPF38AQ8NAV1 312 aaKnown RBP29.31■■■□□ 2.28
PERM1-203ENST00000479361 CHURC1Q8WUH1 139 aa29.31■■■□□ 2.28
PERM1-203ENST00000479361 PAGR1Q9BTK6 254 aa29.31■■■□□ 2.28
PERM1-203ENST00000479361 RBPJLQ9UBG7 517 aa29.31■■■□□ 2.28
PERM1-203ENST00000479361 WDR19Q8NEZ3 1342 aa29.3■■■□□ 2.28
PERM1-203ENST00000479361 PDHBP11177 359 aa29.3■■■□□ 2.28
PERM1-203ENST00000479361 PSMA5P28066 241 aa29.3■■■□□ 2.28
PERM1-203ENST00000479361 IKQ13123 557 aaPredicted RBP29.3■■■□□ 2.28
PERM1-203ENST00000479361 DHX32Q7L7V1 743 aaKnown RBP29.3■■■□□ 2.28
PERM1-203ENST00000479361 FAM160B2Q86V87 743 aa29.3■■■□□ 2.28
PERM1-203ENST00000479361 TMTC2Q8N394 836 aa29.3■■■□□ 2.28
PERM1-203ENST00000479361 CD99L2Q8TCZ2 262 aa29.3■■■□□ 2.28
PERM1-203ENST00000479361 IGDCC4Q8TDY8 1250 aa29.3■■■□□ 2.28
PERM1-203ENST00000479361 TMEM232C9JQI7 657 aa29.29■■■□□ 2.28
PERM1-203ENST00000479361 ERVK-9P63128 1117 aa29.29■■■□□ 2.28
PERM1-203ENST00000479361 ERVK-24P63145 666 aa29.29■■■□□ 2.28
PERM1-203ENST00000479361 KCTD1Q719H9 257 aa29.29■■■□□ 2.28
PERM1-203ENST00000479361 CHMP4CQ96CF2 233 aa29.29■■■□□ 2.28
PERM1-203ENST00000479361 ATG4CQ96DT6 458 aa29.29■■■□□ 2.28
PERM1-203ENST00000479361 JAKMIP1Q96N16 626 aaKnown RBP29.29■■■□□ 2.28
PERM1-203ENST00000479361 TXNRD2Q9NNW7 524 aa29.29■■■□□ 2.28
PERM1-203ENST00000479361 PLA2G6O60733 806 aa29.28■■■□□ 2.28
PERM1-203ENST00000479361 SNHG28P0DPA3 235 aa29.28■■■□□ 2.28
PERM1-203ENST00000479361 GPATCH4Q5T3I0 446 aaKnown RBP29.28■■■□□ 2.28
PERM1-203ENST00000479361 ADAMTS5Q9UNA0 930 aa29.28■■■□□ 2.28
PERM1-203ENST00000479361 CASP8AP2Q9UKL3 1982 aa29.28■■■□□ 2.28
PERM1-203ENST00000479361 FCGRTP55899 365 aa29.27■■■□□ 2.28
PERM1-203ENST00000479361 CCNA1P78396 465 aa29.27■■■□□ 2.28
PERM1-203ENST00000479361 KIFC2Q96AC6 838 aa29.27■■■□□ 2.28
PERM1-203ENST00000479361 VWA5AO00534 786 aa29.26■■■□□ 2.27
PERM1-203ENST00000479361 GNRH1P01148 92 aa29.26■■■□□ 2.27
PERM1-203ENST00000479361 ZNF543Q08ER8 600 aa29.26■■■□□ 2.27
PERM1-203ENST00000479361 BLOC1S2Q6QNY1 142 aa29.26■■■□□ 2.27
PERM1-203ENST00000479361 POTEEQ6S8J3 1075 aa29.26■■■□□ 2.27
PERM1-203ENST00000479361 RASGRP2Q7LDG7 609 aa29.26■■■□□ 2.27
PERM1-203ENST00000479361 CATIPQ7Z7H3 387 aa29.26■■■□□ 2.27
PERM1-203ENST00000479361 CCAR1Q8IX12 1150 aaKnown RBP29.26■■■□□ 2.27
PERM1-203ENST00000479361 LY9Q9HBG7 655 aa29.26■■■□□ 2.27
PERM1-203ENST00000479361 BTBD7Q9P203 1132 aa29.26■■■□□ 2.27
PERM1-203ENST00000479361 CTDP1Q9Y5B0 961 aaPredicted RBP29.26■■■□□ 2.27
PERM1-203ENST00000479361 SH2B2O14492 632 aaPredicted RBP29.25■■■□□ 2.27
PERM1-203ENST00000479361 CNMDO75829 334 aa29.25■■■□□ 2.27
PERM1-203ENST00000479361 FDX1P10109 184 aa29.25■■■□□ 2.27
PERM1-203ENST00000479361 LIFRP42702 1097 aa29.25■■■□□ 2.27
PERM1-203ENST00000479361 PSMC4P43686 418 aa29.25■■■□□ 2.27
PERM1-203ENST00000479361 EXOSC10Q01780 885 aaKnown RBP29.25■■■□□ 2.27
PERM1-203ENST00000479361 ASPRV1Q53RT3 343 aa29.25■■■□□ 2.27
PERM1-203ENST00000479361 CTU1Q7Z7A3 348 aaKnown RBP29.25■■■□□ 2.27
PERM1-203ENST00000479361 EFCC1Q9HA90 598 aa29.25■■■□□ 2.27
PERM1-203ENST00000479361 RLFQ13129 1914 aa29.25■■■□□ 2.27
PERM1-203ENST00000479361 FRMPD2Q68DX3 1309 aaPredicted RBP29.24■■■□□ 2.27
PERM1-203ENST00000479361 ZBED4O75132 1171 aa29.24■■■□□ 2.27
PERM1-203ENST00000479361 FMNL1O95466 1100 aaPredicted RBP29.24■■■□□ 2.27
PERM1-203ENST00000479361 SEC24BO95487 1268 aa29.24■■■□□ 2.27
PERM1-203ENST00000479361 ANAPC15P60006 121 aa29.24■■■□□ 2.27
PERM1-203ENST00000479361 COL9A3Q14050 684 aaPredicted RBP29.24■■■□□ 2.27
PERM1-203ENST00000479361 NFXL1Q6ZNB6 911 aa29.24■■■□□ 2.27
PERM1-203ENST00000479361 GPCPD1Q9NPB8 672 aa29.24■■■□□ 2.27
PERM1-203ENST00000479361 PARP14Q460N5 1801 aa29.23■■■□□ 2.27
PERM1-203ENST00000479361 CCDC69A6NI79 296 aa29.23■■■□□ 2.27
PERM1-203ENST00000479361 PARP1P09874 1014 aaKnown RBP29.23■■■□□ 2.27
PERM1-203ENST00000479361 CASTP20810 708 aaKnown RBP29.23■■■□□ 2.27
PERM1-203ENST00000479361 Q3C1V9 767 aa29.23■■■□□ 2.27
PERM1-203ENST00000479361 BTNL9Q6UXG8 535 aa29.23■■■□□ 2.27
PERM1-203ENST00000479361 LRRC2Q9BYS8 371 aa29.23■■■□□ 2.27
PERM1-203ENST00000479361 SENP2Q9HC62 589 aa29.23■■■□□ 2.27
PERM1-203ENST00000479361 TRIM17Q9Y577 477 aa29.23■■■□□ 2.27
PERM1-203ENST00000479361 PEX10O60683 326 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms