RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 TRIM56Q9BRZ2 755 aaKnown RBP7.14□□□□□ -1.27
RC3H1-204ENST00000479099 CWC25Q9NXE8 425 aaPredicted RBP7.14□□□□□ -1.27
RC3H1-204ENST00000479099 FAM13BQ9NYF5 915 aa7.14□□□□□ -1.27
RC3H1-204ENST00000479099 GTF2IRD1Q9UHL9 959 aa7.14□□□□□ -1.27
RC3H1-204ENST00000479099 NAP1L2Q9ULW6 460 aaPredicted RBP7.14□□□□□ -1.27
RC3H1-204ENST00000479099 SLC45A1Q9Y2W3 748 aa7.14□□□□□ -1.27
RC3H1-204ENST00000479099 SPEF1Q9Y4P9 236 aa7.14□□□□□ -1.27
RC3H1-204ENST00000479099 DNAJC25-GNG10A0A024R161 153 aa7.13□□□□□ -1.27
RC3H1-204ENST00000479099 J3QW42 95 aa7.13□□□□□ -1.27
RC3H1-204ENST00000479099 FIBPO43427 364 aa7.13□□□□□ -1.27
RC3H1-204ENST00000479099 ZSCAN20P17040 1043 aaPredicted RBP7.13□□□□□ -1.27
RC3H1-204ENST00000479099 GSTT1P30711 240 aa7.13□□□□□ -1.27
RC3H1-204ENST00000479099 CRKP46108 304 aa7.13□□□□□ -1.27
RC3H1-204ENST00000479099 IREB2P48200 963 aaKnown RBP7.13□□□□□ -1.27
RC3H1-204ENST00000479099 TRIP4Q15650 581 aaPredicted RBP7.13□□□□□ -1.27
RC3H1-204ENST00000479099 CCDC85BQ15834 202 aaPredicted RBP7.13□□□□□ -1.27
RC3H1-204ENST00000479099 PPP2R5EQ16537 467 aa7.13□□□□□ -1.27
RC3H1-204ENST00000479099 ZC3H12BQ5HYM0 836 aaKnown RBP7.13□□□□□ -1.27
RC3H1-204ENST00000479099 DACT2Q5SW24 774 aa7.13□□□□□ -1.27
RC3H1-204ENST00000479099 RNF219Q5W0B1 726 aaPredicted RBP7.13□□□□□ -1.27
RC3H1-204ENST00000479099 STRA8Q7Z7C7 330 aa7.13□□□□□ -1.27
RC3H1-204ENST00000479099 ZSCAN30Q86W11 494 aa7.13□□□□□ -1.27
RC3H1-204ENST00000479099 TTC16Q8NEE8 873 aa7.13□□□□□ -1.27
RC3H1-204ENST00000479099 NSUN5Q96P11 429 aaKnown RBP7.13□□□□□ -1.27
RC3H1-204ENST00000479099 SLC26A8Q96RN1 970 aa7.13□□□□□ -1.27
RC3H1-204ENST00000479099 TNKS2Q9H2K2 1166 aa7.13□□□□□ -1.27
RC3H1-204ENST00000479099 A0A1W2PRQ8 180 aa7.12□□□□□ -1.27
RC3H1-204ENST00000479099 A6NHS1 94 aa7.12□□□□□ -1.27
RC3H1-204ENST00000479099 TTC36A6NLP5 189 aa7.12□□□□□ -1.27
RC3H1-204ENST00000479099 DLL1O00548 723 aa7.12□□□□□ -1.27
RC3H1-204ENST00000479099 ORC4O43929 436 aa7.12□□□□□ -1.27
RC3H1-204ENST00000479099 NBNO60934 754 aa7.12□□□□□ -1.27
RC3H1-204ENST00000479099 FAM153BP0C7A2 387 aa7.12□□□□□ -1.27
RC3H1-204ENST00000479099 NOS3P29474 1203 aa7.12□□□□□ -1.27
RC3H1-204ENST00000479099 TOMM20Q15388 145 aa7.12□□□□□ -1.27
RC3H1-204ENST00000479099 FAM133BQ5BKY9 247 aaKnown RBP7.12□□□□□ -1.27
RC3H1-204ENST00000479099 ARTNQ5T4W7 220 aa7.12□□□□□ -1.27
RC3H1-204ENST00000479099 LVRNQ6Q4G3 990 aa7.12□□□□□ -1.27
RC3H1-204ENST00000479099 DDX46Q7L014 1031 aaKnown RBP7.12□□□□□ -1.27
RC3H1-204ENST00000479099 ARMCX6Q7L4S7 300 aa7.12□□□□□ -1.27
RC3H1-204ENST00000479099 CLASRPQ8N2M8 674 aaKnown RBP7.12□□□□□ -1.27
RC3H1-204ENST00000479099 PHC3Q8NDX5 983 aa7.12□□□□□ -1.27
RC3H1-204ENST00000479099 VPS37AQ8NEZ2 397 aa7.12□□□□□ -1.27
RC3H1-204ENST00000479099 WDR66Q8TBY9 1149 aa7.12□□□□□ -1.27
RC3H1-204ENST00000479099 GJA10Q969M2 543 aa7.12□□□□□ -1.27
RC3H1-204ENST00000479099 TARS2Q9BW92 718 aaKnown RBP7.12□□□□□ -1.27
RC3H1-204ENST00000479099 CCDC8Q9H0W5 538 aaPredicted RBP7.12□□□□□ -1.27
RC3H1-204ENST00000479099 FBRSQ9HAH7 460 aa7.12□□□□□ -1.27
RC3H1-204ENST00000479099 ZFP64Q9NPA5 681 aa7.12□□□□□ -1.27
RC3H1-204ENST00000479099 UBAP1LF5GYI3 381 aa7.11□□□□□ -1.27
RC3H1-204ENST00000479099 RPN1P04843 607 aaKnown RBP7.11□□□□□ -1.27
RC3H1-204ENST00000479099 PGRP06401 933 aa7.11□□□□□ -1.27
RC3H1-204ENST00000479099 HSP90AB1P08238 724 aaKnown RBP7.11□□□□□ -1.27
RC3H1-204ENST00000479099 FAM160A1Q05DH4 1040 aa7.11□□□□□ -1.27
RC3H1-204ENST00000479099 BIRC3Q13489 604 aa7.11□□□□□ -1.27
RC3H1-204ENST00000479099 CBX2Q14781 532 aaPredicted RBP7.11□□□□□ -1.27
RC3H1-204ENST00000479099 JAKMIP3Q5VZ66 844 aa7.11□□□□□ -1.27
RC3H1-204ENST00000479099 GDF6Q6KF10 455 aaPredicted RBP7.11□□□□□ -1.27
RC3H1-204ENST00000479099 MZT2AQ6P582 158 aa7.11□□□□□ -1.27
RC3H1-204ENST00000479099 CFAP161Q6P656 301 aa7.11□□□□□ -1.27
RC3H1-204ENST00000479099 MAP4K3Q8IVH8 894 aa7.11□□□□□ -1.27
RC3H1-204ENST00000479099 IL22RA1Q8N6P7 574 aa7.11□□□□□ -1.27
RC3H1-204ENST00000479099 GPR152Q8TDT2 470 aa7.11□□□□□ -1.27
RC3H1-204ENST00000479099 DCAF11Q8TEB1 546 aa7.11□□□□□ -1.27
RC3H1-204ENST00000479099 USP33Q8TEY7 942 aa7.11□□□□□ -1.27
RC3H1-204ENST00000479099 ANKRD24Q8TF21 1146 aa7.11□□□□□ -1.27
RC3H1-204ENST00000479099 CRBNQ96SW2 442 aa7.11□□□□□ -1.27
RC3H1-204ENST00000479099 KIF2CQ99661 725 aa7.11□□□□□ -1.27
RC3H1-204ENST00000479099 RUSC1Q9BVN2 902 aa7.11□□□□□ -1.27
RC3H1-204ENST00000479099 DGKBQ9Y6T7 804 aa7.11□□□□□ -1.27
RC3H1-204ENST00000479099 MORC2Q9Y6X9 1032 aaPredicted RBP7.11□□□□□ -1.27
RC3H1-204ENST00000479099 C9IYK1 514 aa7.1□□□□□ -1.27
RC3H1-204ENST00000479099 APAF1O14727 1248 aa7.1□□□□□ -1.27
RC3H1-204ENST00000479099 GPR39O43194 453 aa7.1□□□□□ -1.27
RC3H1-204ENST00000479099 FAM200BP0CF97 657 aa7.1□□□□□ -1.27
RC3H1-204ENST00000479099 TGFB3P10600 412 aa7.1□□□□□ -1.27
RC3H1-204ENST00000479099 EIF5P55010 431 aaKnown RBP7.1□□□□□ -1.27
RC3H1-204ENST00000479099 LMNB2Q03252 620 aa7.1□□□□□ -1.27
RC3H1-204ENST00000479099 CHAF1AQ13111 956 aaPredicted RBP7.1□□□□□ -1.27
RC3H1-204ENST00000479099 DDX10Q13206 875 aaKnown RBP7.1□□□□□ -1.27
RC3H1-204ENST00000479099 TCIRG1Q13488 830 aa7.1□□□□□ -1.27
RC3H1-204ENST00000479099 GBX1Q14549 363 aa7.1□□□□□ -1.27
RC3H1-204ENST00000479099 SAFBQ15424 915 aaKnown RBP eCLIP7.1□□□□□ -1.27
RC3H1-204ENST00000479099 RASSF3Q86WH2 238 aa7.1□□□□□ -1.27
RC3H1-204ENST00000479099 C3orf58Q8NDZ4 430 aa7.1□□□□□ -1.27
RC3H1-204ENST00000479099 OR13H1Q8NG92 308 aa7.1□□□□□ -1.27
RC3H1-204ENST00000479099 IPO4Q8TEX9 1081 aaKnown RBP7.1□□□□□ -1.27
RC3H1-204ENST00000479099 MEGF10Q96KG7 1140 aa7.1□□□□□ -1.27
RC3H1-204ENST00000479099 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.1□□□□□ -1.27
RC3H1-204ENST00000479099 PUS7LQ9H0K6 701 aaKnown RBP7.1□□□□□ -1.27
RC3H1-204ENST00000479099 MRPL18Q9H0U6 180 aaKnown RBP7.1□□□□□ -1.27
RC3H1-204ENST00000479099 ZFYVE28Q9HCC9 887 aa7.1□□□□□ -1.27
RC3H1-204ENST00000479099 NPHS2Q9NP85 383 aa7.1□□□□□ -1.27
RC3H1-204ENST00000479099 FOXD3Q9UJU5 478 aaPredicted RBP7.1□□□□□ -1.27
RC3H1-204ENST00000479099 FNDC3AQ9Y2H6 1198 aaKnown RBP7.1□□□□□ -1.27
RC3H1-204ENST00000479099 ROBO2Q9HCK4 1378 aa7.09□□□□□ -1.27
RC3H1-204ENST00000479099 GABRDO14764 452 aa7.09□□□□□ -1.27
RC3H1-204ENST00000479099 DDAH1O94760 285 aa7.09□□□□□ -1.27
RC3H1-204ENST00000479099 PF4P02776 101 aa7.09□□□□□ -1.27
RC3H1-204ENST00000479099 RENBPP51606 427 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms