RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 MARCH10Q8NA82 808 aaPredicted RBP6.31□□□□□ -1.4
HPS3-205ENST00000478525 FOXP3Q9BZS1 431 aa6.31□□□□□ -1.4
HPS3-205ENST00000478525 ADAMTS20P59510 1910 aa6.31□□□□□ -1.4
HPS3-205ENST00000478525 FOXD2O60548 495 aaPredicted RBP6.3□□□□□ -1.4
HPS3-205ENST00000478525 EPHB3P54753 998 aa6.3□□□□□ -1.4
HPS3-205ENST00000478525 WAPLQ7Z5K2 1190 aa6.3□□□□□ -1.4
HPS3-205ENST00000478525 SYTL5Q8TDW5 730 aaPredicted RBP6.3□□□□□ -1.4
HPS3-205ENST00000478525 PANK1Q8TE04 598 aa6.3□□□□□ -1.4
HPS3-205ENST00000478525 MAP6Q96JE9 813 aa6.3□□□□□ -1.4
HPS3-205ENST00000478525 FAM161BQ96MY7 647 aa6.3□□□□□ -1.4
HPS3-205ENST00000478525 TMEM82A0PJX8 343 aa6.29□□□□□ -1.4
HPS3-205ENST00000478525 NRDCO43847 1150 aa6.29□□□□□ -1.4
HPS3-205ENST00000478525 SRSF3P84103 164 aaKnown RBP6.29□□□□□ -1.4
HPS3-205ENST00000478525 FAM160A1Q05DH4 1040 aa6.29□□□□□ -1.4
HPS3-205ENST00000478525 REC114Q7Z4M0 266 aa6.29□□□□□ -1.4
HPS3-205ENST00000478525 TMEM151BQ8IW70 566 aa6.29□□□□□ -1.4
HPS3-205ENST00000478525 USHBP1Q8N6Y0 703 aa6.29□□□□□ -1.4
HPS3-205ENST00000478525 TCTN2Q96GX1 697 aa6.29□□□□□ -1.4
HPS3-205ENST00000478525 SIGLEC10Q96LC7 697 aa6.29□□□□□ -1.4
HPS3-205ENST00000478525 TMEM74Q96NL1 305 aa6.29□□□□□ -1.4
HPS3-205ENST00000478525 ASCC2Q9H1I8 757 aaPredicted RBP6.29□□□□□ -1.4
HPS3-205ENST00000478525 RTEL1Q9NZ71 1219 aa6.29□□□□□ -1.4
HPS3-205ENST00000478525 ZMYM5Q9UJ78 669 aa6.29□□□□□ -1.4
HPS3-205ENST00000478525 JAG2Q9Y219 1238 aa6.29□□□□□ -1.4
HPS3-205ENST00000478525 HRKO00198 91 aa6.28□□□□□ -1.4
HPS3-205ENST00000478525 UBOX5O94941 541 aa6.28□□□□□ -1.4
HPS3-205ENST00000478525 SDHBP21912 280 aa6.28□□□□□ -1.4
HPS3-205ENST00000478525 GBP1P32455 592 aa6.28□□□□□ -1.4
HPS3-205ENST00000478525 KIR2DL1P43626 348 aaPredicted RBP6.28□□□□□ -1.4
HPS3-205ENST00000478525 KIR2DL2P43627 348 aaPredicted RBP6.28□□□□□ -1.4
HPS3-205ENST00000478525 NFIXQ14938 502 aa6.28□□□□□ -1.4
HPS3-205ENST00000478525 BBS9Q3SYG4 887 aa6.28□□□□□ -1.4
HPS3-205ENST00000478525 CEP128Q6ZU80 1094 aa6.28□□□□□ -1.4
HPS3-205ENST00000478525 TMC4Q7Z404 712 aa6.28□□□□□ -1.4
HPS3-205ENST00000478525 TMC3Q7Z5M5 1100 aa6.28□□□□□ -1.4
HPS3-205ENST00000478525 DAGLBQ8NCG7 672 aa6.28□□□□□ -1.4
HPS3-205ENST00000478525 FBXO27Q8NI29 283 aa6.28□□□□□ -1.4
HPS3-205ENST00000478525 ENOX1Q8TC92 643 aaKnown RBP6.28□□□□□ -1.4
HPS3-205ENST00000478525 CRELD1Q96HD1 420 aa6.28□□□□□ -1.4
HPS3-205ENST00000478525 HHIPL1Q96JK4 782 aa6.28□□□□□ -1.4
HPS3-205ENST00000478525 CRTAC1Q9NQ79 661 aa6.28□□□□□ -1.4
HPS3-205ENST00000478525 TCFL5Q9UL49 500 aa6.28□□□□□ -1.4
HPS3-205ENST00000478525 IRAK3Q9Y616 596 aa6.28□□□□□ -1.4
HPS3-205ENST00000478525 RGS13O14921 159 aa6.27□□□□□ -1.41
HPS3-205ENST00000478525 FKTNO75072 461 aa6.27□□□□□ -1.41
HPS3-205ENST00000478525 VIPR1P32241 457 aa6.27□□□□□ -1.41
HPS3-205ENST00000478525 GBP2P32456 591 aaPredicted RBP6.27□□□□□ -1.41
HPS3-205ENST00000478525 CHMP4BP1P59074 171 aa6.27□□□□□ -1.41
HPS3-205ENST00000478525 RNF4P78317 190 aa6.27□□□□□ -1.41
HPS3-205ENST00000478525 SNW1Q13573 536 aaKnown RBP6.27□□□□□ -1.41
HPS3-205ENST00000478525 MPP2Q14168 576 aa6.27□□□□□ -1.41
HPS3-205ENST00000478525 SLC14A2Q15849 920 aa6.27□□□□□ -1.41
HPS3-205ENST00000478525 SNAP47Q5SQN1 464 aa6.27□□□□□ -1.41
HPS3-205ENST00000478525 ZPBP2Q6X784 338 aa6.27□□□□□ -1.41
HPS3-205ENST00000478525 GOLM1Q8NBJ4 401 aa6.27□□□□□ -1.41
HPS3-205ENST00000478525 DACT3Q96B18 629 aaPredicted RBP6.27□□□□□ -1.41
HPS3-205ENST00000478525 PLCD4Q9BRC7 762 aa6.27□□□□□ -1.41
HPS3-205ENST00000478525 XYLT2Q9H1B5 865 aa6.27□□□□□ -1.41
HPS3-205ENST00000478525 CNTD2Q9H8S5 307 aa6.27□□□□□ -1.41
HPS3-205ENST00000478525 EPB41L4AQ9HCS5 686 aaPredicted RBP6.27□□□□□ -1.41
HPS3-205ENST00000478525 SIRT5Q9NXA8 310 aa6.27□□□□□ -1.41
HPS3-205ENST00000478525 SYN1P17600 705 aa6.26□□□□□ -1.41
HPS3-205ENST00000478525 GARTP22102 1010 aa6.26□□□□□ -1.41
HPS3-205ENST00000478525 AFF3P51826 1226 aaKnown RBP6.26□□□□□ -1.41
HPS3-205ENST00000478525 PCBP3P57721 371 aaKnown RBP6.26□□□□□ -1.41
HPS3-205ENST00000478525 XPCQ01831 940 aaPredicted RBP6.26□□□□□ -1.41
HPS3-205ENST00000478525 ARSHQ5FYA8 562 aa6.26□□□□□ -1.41
HPS3-205ENST00000478525 RSRP1Q9BUV0 290 aa6.26□□□□□ -1.41
HPS3-205ENST00000478525 OTOL1A6NHN0 477 aaPredicted RBP6.25□□□□□ -1.41
HPS3-205ENST00000478525 SLC22A31A6NKX4 558 aa6.25□□□□□ -1.41
HPS3-205ENST00000478525 IRS4O14654 1257 aaPredicted RBP6.25□□□□□ -1.41
HPS3-205ENST00000478525 N4BP3O15049 544 aa6.25□□□□□ -1.41
HPS3-205ENST00000478525 TLR3O15455 904 aaKnown RBP6.25□□□□□ -1.41
HPS3-205ENST00000478525 SYPP08247 313 aa6.25□□□□□ -1.41
HPS3-205ENST00000478525 CDR1P51861 262 aa6.25□□□□□ -1.41
HPS3-205ENST00000478525 KRTAP10-2P60368 255 aa6.25□□□□□ -1.41
HPS3-205ENST00000478525 RELL1Q8IUW5 271 aa6.25□□□□□ -1.41
HPS3-205ENST00000478525 ZNF655Q8N720 491 aaPredicted RBP6.25□□□□□ -1.41
HPS3-205ENST00000478525 LINC00116Q8NCU8 138 aa6.25□□□□□ -1.41
HPS3-205ENST00000478525 MINDY4BA8MYZ0 360 aa6.24□□□□□ -1.41
HPS3-205ENST00000478525 PRAMEF1O95521 474 aa6.24□□□□□ -1.41
HPS3-205ENST00000478525 RAG1P15918 1043 aa6.24□□□□□ -1.41
HPS3-205ENST00000478525 PNLIPP16233 465 aa6.24□□□□□ -1.41
HPS3-205ENST00000478525 POLR2BP30876 1174 aaKnown RBP6.24□□□□□ -1.41
HPS3-205ENST00000478525 YBX1P67809 324 aaKnown RBP6.24□□□□□ -1.41
HPS3-205ENST00000478525 KIR3DS1Q14943 382 aa6.24□□□□□ -1.41
HPS3-205ENST00000478525 NBPF9Q3BBW0 867 aa6.24□□□□□ -1.41
HPS3-205ENST00000478525 NBPF12Q5TAG4 269 aaPredicted RBP6.24□□□□□ -1.41
HPS3-205ENST00000478525 FAM196AQ6ZSG2 479 aa6.24□□□□□ -1.41
HPS3-205ENST00000478525 ERICH6Q7L0X2 663 aa6.24□□□□□ -1.41
HPS3-205ENST00000478525 SSU72P8A0A1W2PR75 194 aa6.23□□□□□ -1.41
HPS3-205ENST00000478525 PATL2C9JE40 543 aaKnown RBP6.23□□□□□ -1.41
HPS3-205ENST00000478525 SASH1O94885 1247 aa6.23□□□□□ -1.41
HPS3-205ENST00000478525 RTP1P59025 263 aa6.23□□□□□ -1.41
HPS3-205ENST00000478525 ERVFRD-1P60508 538 aa6.23□□□□□ -1.41
HPS3-205ENST00000478525 PWP1Q13610 501 aa6.23□□□□□ -1.41
HPS3-205ENST00000478525 VMACQ2NL98 169 aa6.23□□□□□ -1.41
HPS3-205ENST00000478525 SKOR2Q2VWA4 1001 aaPredicted RBP6.23□□□□□ -1.41
HPS3-205ENST00000478525 OVOS1Q6IE37 1185 aa6.23□□□□□ -1.41
HPS3-205ENST00000478525 SND1Q7KZF4 910 aaKnown RBP eCLIP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms