RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 NEDD4P46934 1319 aa18.43■□□□□ 0.54
HMGA1-206ENST00000478214 PCP11498 1178 aaKnown RBP18.42■□□□□ 0.54
HMGA1-206ENST00000478214 ELNP15502 786 aa18.42■□□□□ 0.54
HMGA1-206ENST00000478214 IMMTQ16891 758 aaKnown RBP18.42■□□□□ 0.54
HMGA1-206ENST00000478214 BMP2KLQ5H9B9 411 aa18.42■□□□□ 0.54
HMGA1-206ENST00000478214 SLFN13Q68D06 897 aa18.42■□□□□ 0.54
HMGA1-206ENST00000478214 GPR142Q7Z601 462 aa18.42■□□□□ 0.54
HMGA1-206ENST00000478214 MB21D1Q8N884 522 aa18.42■□□□□ 0.54
HMGA1-206ENST00000478214 GMCL1P1Q8NEA9 526 aa18.42■□□□□ 0.54
HMGA1-206ENST00000478214 PPP1R9AQ9ULJ8 1098 aa18.42■□□□□ 0.54
HMGA1-206ENST00000478214 NOVP48745 357 aa18.41■□□□□ 0.54
HMGA1-206ENST00000478214 WDR78Q5VTH9 848 aa18.41■□□□□ 0.54
HMGA1-206ENST00000478214 PLEKHH3Q7Z736 793 aa18.41■□□□□ 0.54
HMGA1-206ENST00000478214 SLAIN1Q8ND83 568 aa18.41■□□□□ 0.54
HMGA1-206ENST00000478214 CHMP4CQ96CF2 233 aa18.41■□□□□ 0.54
HMGA1-206ENST00000478214 MOV10L1Q9BXT6 1211 aaKnown RBP18.41■□□□□ 0.54
HMGA1-206ENST00000478214 SPATC1LQ9H0A9 340 aa18.41■□□□□ 0.54
HMGA1-206ENST00000478214 CWC22Q9HCG8 908 aaKnown RBP18.41■□□□□ 0.54
HMGA1-206ENST00000478214 TCP11L1Q9NUJ3 509 aa18.41■□□□□ 0.54
HMGA1-206ENST00000478214 BIN2Q9UBW5 565 aaPredicted RBP18.41■□□□□ 0.54
HMGA1-206ENST00000478214 ADAMTS5Q9UNA0 930 aa18.41■□□□□ 0.54
HMGA1-206ENST00000478214 RLFQ13129 1914 aa18.41■□□□□ 0.54
HMGA1-206ENST00000478214 DOCK3Q8IZD9 2030 aa18.4■□□□□ 0.54
HMGA1-206ENST00000478214 POTEFA5A3E0 1075 aa18.4■□□□□ 0.54
HMGA1-206ENST00000478214 VWA5AO00534 786 aa18.4■□□□□ 0.54
HMGA1-206ENST00000478214 PLS1Q14651 629 aa18.4■□□□□ 0.54
HMGA1-206ENST00000478214 TMEM132BQ14DG7 1078 aa18.4■□□□□ 0.54
HMGA1-206ENST00000478214 MTFR1Q15390 333 aa18.4■□□□□ 0.54
HMGA1-206ENST00000478214 ESR2Q92731 530 aa18.4■□□□□ 0.54
HMGA1-206ENST00000478214 NUDT12Q9BQG2 462 aa18.4■□□□□ 0.54
HMGA1-206ENST00000478214 SLF1Q9BQI6 1058 aa18.4■□□□□ 0.54
HMGA1-206ENST00000478214 KDM4AO75164 1064 aa18.39■□□□□ 0.53
HMGA1-206ENST00000478214 BMP3P12645 472 aa18.39■□□□□ 0.53
HMGA1-206ENST00000478214 CYP2B6P20813 491 aa18.39■□□□□ 0.53
HMGA1-206ENST00000478214 MCCP23508 829 aa18.39■□□□□ 0.53
HMGA1-206ENST00000478214 RGS19P49795 217 aa18.39■□□□□ 0.53
HMGA1-206ENST00000478214 MORN1Q5T089 497 aa18.39■□□□□ 0.53
HMGA1-206ENST00000478214 PXYLP1Q8TE99 480 aa18.39■□□□□ 0.53
HMGA1-206ENST00000478214 SOCS4Q8WXH5 440 aa18.39■□□□□ 0.53
HMGA1-206ENST00000478214 USP6NLQ92738 828 aa18.39■□□□□ 0.53
HMGA1-206ENST00000478214 GMCL1Q96IK5 515 aa18.39■□□□□ 0.53
HMGA1-206ENST00000478214 TMEM47Q9BQJ4 181 aa18.39■□□□□ 0.53
HMGA1-206ENST00000478214 ISY1Q9ULR0 285 aaKnown RBP18.39■□□□□ 0.53
HMGA1-206ENST00000478214 B4E1Z4 1266 aa18.38■□□□□ 0.53
HMGA1-206ENST00000478214 TOP1P11387 765 aaKnown RBP18.38■□□□□ 0.53
HMGA1-206ENST00000478214 ERCC3P19447 782 aa18.38■□□□□ 0.53
HMGA1-206ENST00000478214 SLC1A4P43007 532 aa18.38■□□□□ 0.53
HMGA1-206ENST00000478214 RCSD1Q6JBY9 416 aa18.38■□□□□ 0.53
HMGA1-206ENST00000478214 RASGRP2Q7LDG7 609 aa18.38■□□□□ 0.53
HMGA1-206ENST00000478214 PRPF38AQ8NAV1 312 aaKnown RBP18.38■□□□□ 0.53
HMGA1-206ENST00000478214 REPS2Q8NFH8 660 aa18.38■□□□□ 0.53
HMGA1-206ENST00000478214 KIFC2Q96AC6 838 aa18.38■□□□□ 0.53
HMGA1-206ENST00000478214 ZKSCAN3Q9BRR0 538 aa18.38■□□□□ 0.53
HMGA1-206ENST00000478214 ESYT1Q9BSJ8 1104 aa18.38■□□□□ 0.53
HMGA1-206ENST00000478214 PPP4R2Q9NY27 417 aa18.38■□□□□ 0.53
HMGA1-206ENST00000478214 FEM1BQ9UK73 627 aa18.38■□□□□ 0.53
HMGA1-206ENST00000478214 MTMR7Q9Y216 660 aa18.38■□□□□ 0.53
HMGA1-206ENST00000478214 U3KPZ7 1027 aaPredicted RBP18.38■□□□□ 0.53
HMGA1-206ENST00000478214 MYH4Q9Y623 1939 aa18.38■□□□□ 0.53
HMGA1-206ENST00000478214 KIAA0100Q14667 2235 aaKnown RBP18.37■□□□□ 0.53
HMGA1-206ENST00000478214 BRCA2P51587 3418 aa18.37■□□□□ 0.53
HMGA1-206ENST00000478214 TMEM232C9JQI7 657 aa18.37■□□□□ 0.53
HMGA1-206ENST00000478214 INHAP05111 366 aa18.37■□□□□ 0.53
HMGA1-206ENST00000478214 PTPREP23469 700 aa18.37■□□□□ 0.53
HMGA1-206ENST00000478214 UBXN2AP68543 259 aa18.37■□□□□ 0.53
HMGA1-206ENST00000478214 ERICH6BQ5W0A0 696 aa18.37■□□□□ 0.53
HMGA1-206ENST00000478214 NCAPG2Q86XI2 1143 aa18.37■□□□□ 0.53
HMGA1-206ENST00000478214 SHCBP1Q8NEM2 672 aa18.37■□□□□ 0.53
HMGA1-206ENST00000478214 MAP4K1Q92918 833 aa18.37■□□□□ 0.53
HMGA1-206ENST00000478214 TMEM106CQ9BVX2 250 aa18.37■□□□□ 0.53
HMGA1-206ENST00000478214 ZNF214Q9UL59 606 aaPredicted RBP18.37■□□□□ 0.53
HMGA1-206ENST00000478214 IVNS1ABPQ9Y6Y0 642 aa18.37■□□□□ 0.53
HMGA1-206ENST00000478214 A0A0G2JMZ2 1700 aa18.37■□□□□ 0.53
HMGA1-206ENST00000478214 SLC15A5A6NIM6 579 aa18.36■□□□□ 0.53
HMGA1-206ENST00000478214 CYP21A2P08686 494 aa18.36■□□□□ 0.53
HMGA1-206ENST00000478214 CCL5P13501 91 aa18.36■□□□□ 0.53
HMGA1-206ENST00000478214 STAT3P40763 770 aa18.36■□□□□ 0.53
HMGA1-206ENST00000478214 RGS2P41220 211 aa18.36■□□□□ 0.53
HMGA1-206ENST00000478214 NT5C2P49902 561 aa18.36■□□□□ 0.53
HMGA1-206ENST00000478214 MAP2K5Q13163 448 aa18.36■□□□□ 0.53
HMGA1-206ENST00000478214 LAMA4Q16363 1823 aa18.36■□□□□ 0.53
HMGA1-206ENST00000478214 KCTD1Q719H9 257 aa18.36■□□□□ 0.53
HMGA1-206ENST00000478214 TTC14Q96N46 770 aa18.36■□□□□ 0.53
HMGA1-206ENST00000478214 CNNM2Q9H8M5 875 aa18.36■□□□□ 0.53
HMGA1-206ENST00000478214 TAF6LQ9Y6J9 622 aa18.36■□□□□ 0.53
HMGA1-206ENST00000478214 XRCC5P13010 732 aaKnown RBP18.35■□□□□ 0.53
HMGA1-206ENST00000478214 EN2P19622 333 aaPredicted RBP18.35■□□□□ 0.53
HMGA1-206ENST00000478214 TRIM32Q13049 653 aa18.35■□□□□ 0.53
HMGA1-206ENST00000478214 IKQ13123 557 aaPredicted RBP18.35■□□□□ 0.53
HMGA1-206ENST00000478214 GRB14Q14449 540 aa18.35■□□□□ 0.53
HMGA1-206ENST00000478214 KIAA1211Q6ZU35 1233 aa18.35■□□□□ 0.53
HMGA1-206ENST00000478214 RIOX2Q8IUF8 465 aa18.35■□□□□ 0.53
HMGA1-206ENST00000478214 TRIB2Q92519 343 aa18.35■□□□□ 0.53
HMGA1-206ENST00000478214 KRT23Q9C075 422 aa18.35■□□□□ 0.53
HMGA1-206ENST00000478214 LSG1Q9H089 658 aaKnown RBP18.35■□□□□ 0.53
HMGA1-206ENST00000478214 UNC93B1Q9H1C4 597 aa18.35■□□□□ 0.53
HMGA1-206ENST00000478214 MROH8Q9H579 483 aa18.35■□□□□ 0.53
HMGA1-206ENST00000478214 ZSWIM5Q9P217 1185 aa18.35■□□□□ 0.53
HMGA1-206ENST00000478214 RBM8AQ9Y5S9 174 aaKnown RBP18.35■□□□□ 0.53
HMGA1-206ENST00000478214 PLXNB2O15031 1838 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms