RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 USP17L17D6RBQ6 530 aa9.91□□□□□ -0.82
ERCC8-205ENST00000477893 USP17L19D6RCP7 530 aa9.91□□□□□ -0.82
ERCC8-205ENST00000477893 USP17L20D6RJB6 530 aa9.91□□□□□ -0.82
ERCC8-205ENST00000477893 ADCY3O60266 1144 aa9.91□□□□□ -0.82
ERCC8-205ENST00000477893 PDE1AP54750 535 aa9.91□□□□□ -0.82
ERCC8-205ENST00000477893 USP17L24Q0WX57 530 aa9.91□□□□□ -0.82
ERCC8-205ENST00000477893 LRRFIP1Q32MZ4 808 aaKnown RBP9.91□□□□□ -0.82
ERCC8-205ENST00000477893 TMEM179Q6ZVK1 233 aa9.91□□□□□ -0.82
ERCC8-205ENST00000477893 C16orf86Q6ZW13 317 aa9.91□□□□□ -0.82
ERCC8-205ENST00000477893 GPRC5AQ8NFJ5 357 aa9.91□□□□□ -0.82
ERCC8-205ENST00000477893 KIAA1683Q9H0B3 1180 aa9.91□□□□□ -0.82
ERCC8-205ENST00000477893 ARHGEF10LQ9HCE6 1279 aa9.91□□□□□ -0.82
ERCC8-205ENST00000477893 MGAMO43451 1857 aa9.91□□□□□ -0.82
ERCC8-205ENST00000477893 MYH8P13535 1937 aa9.9□□□□□ -0.82
ERCC8-205ENST00000477893 INHAP05111 366 aa9.9□□□□□ -0.82
ERCC8-205ENST00000477893 CCL5P13501 91 aa9.9□□□□□ -0.82
ERCC8-205ENST00000477893 CYP2B6P20813 491 aa9.9□□□□□ -0.82
ERCC8-205ENST00000477893 HOXA7P31268 230 aaPredicted RBP9.9□□□□□ -0.82
ERCC8-205ENST00000477893 ERVK-9P63128 1117 aa9.9□□□□□ -0.82
ERCC8-205ENST00000477893 ERVK-24P63145 666 aa9.9□□□□□ -0.82
ERCC8-205ENST00000477893 UBXN2AP68543 259 aa9.9□□□□□ -0.82
ERCC8-205ENST00000477893 KIAA1755Q5JYT7 1200 aa9.9□□□□□ -0.82
ERCC8-205ENST00000477893 ZMYM1Q5SVZ6 1142 aa9.9□□□□□ -0.82
ERCC8-205ENST00000477893 RILPL2Q969X0 211 aa9.9□□□□□ -0.82
ERCC8-205ENST00000477893 CHMP4CQ96CF2 233 aa9.9□□□□□ -0.82
ERCC8-205ENST00000477893 C12orf42Q96LP6 360 aa9.9□□□□□ -0.82
ERCC8-205ENST00000477893 UNC93B1Q9H1C4 597 aa9.9□□□□□ -0.82
ERCC8-205ENST00000477893 MKNK2Q9HBH9 465 aa9.9□□□□□ -0.82
ERCC8-205ENST00000477893 RBPJLQ9UBG7 517 aa9.9□□□□□ -0.82
ERCC8-205ENST00000477893 PPP1R37O75864 691 aa9.89□□□□□ -0.83
ERCC8-205ENST00000477893 EEF2P13639 858 aaKnown RBP9.89□□□□□ -0.83
ERCC8-205ENST00000477893 GNAT2P19087 354 aa9.89□□□□□ -0.83
ERCC8-205ENST00000477893 Q3C1V9 767 aa9.89□□□□□ -0.83
ERCC8-205ENST00000477893 CATSPERGQ6ZRH7 1159 aa9.89□□□□□ -0.83
ERCC8-205ENST00000477893 CHD1LQ86WJ1 897 aa9.89□□□□□ -0.83
ERCC8-205ENST00000477893 IFNL3Q8IZI9 196 aa9.89□□□□□ -0.83
ERCC8-205ENST00000477893 EVI5LQ96CN4 794 aa9.89□□□□□ -0.83
ERCC8-205ENST00000477893 FAM227BQ96M60 508 aa9.89□□□□□ -0.83
ERCC8-205ENST00000477893 NACAP1Q9BZK3 213 aa9.89□□□□□ -0.83
ERCC8-205ENST00000477893 RNF208Q9H0X6 261 aa9.89□□□□□ -0.83
ERCC8-205ENST00000477893 NAPBQ9H115 298 aa9.89□□□□□ -0.83
ERCC8-205ENST00000477893 PORCNQ9H237 461 aa9.89□□□□□ -0.83
ERCC8-205ENST00000477893 SH2D4AQ9H788 454 aa9.89□□□□□ -0.83
ERCC8-205ENST00000477893 MORF4L1Q9UBU8 362 aa9.89□□□□□ -0.83
ERCC8-205ENST00000477893 A0A0D9SFI3 127 aa9.88□□□□□ -0.83
ERCC8-205ENST00000477893 SPDYE16A6NNV3 312 aaPredicted RBP9.88□□□□□ -0.83
ERCC8-205ENST00000477893 PATL2C9JE40 543 aaKnown RBP9.88□□□□□ -0.83
ERCC8-205ENST00000477893 CNMDO75829 334 aa9.88□□□□□ -0.83
ERCC8-205ENST00000477893 FLOT1O75955 427 aa9.88□□□□□ -0.83
ERCC8-205ENST00000477893 RASA1P20936 1047 aa9.88□□□□□ -0.83
ERCC8-205ENST00000477893 CTDSPL2Q05D32 466 aa9.88□□□□□ -0.83
ERCC8-205ENST00000477893 TRIM32Q13049 653 aa9.88□□□□□ -0.83
ERCC8-205ENST00000477893 NMIQ13287 307 aaPredicted RBP9.88□□□□□ -0.83
ERCC8-205ENST00000477893 AAMPQ13685 434 aa9.88□□□□□ -0.83
ERCC8-205ENST00000477893 PLS1Q14651 629 aa9.88□□□□□ -0.83
ERCC8-205ENST00000477893 SBK1Q52WX2 424 aa9.88□□□□□ -0.83
ERCC8-205ENST00000477893 VPS53Q5VIR6 699 aa9.88□□□□□ -0.83
ERCC8-205ENST00000477893 THSD4Q6ZMP0 1018 aa9.88□□□□□ -0.83
ERCC8-205ENST00000477893 SMC5Q8IY18 1101 aa9.88□□□□□ -0.83
ERCC8-205ENST00000477893 CCDC17Q96LX7 622 aa9.88□□□□□ -0.83
ERCC8-205ENST00000477893 NUP88Q99567 741 aaPredicted RBP9.88□□□□□ -0.83
ERCC8-205ENST00000477893 BTBD7Q9P203 1132 aa9.88□□□□□ -0.83
ERCC8-205ENST00000477893 STAP2Q9UGK3 403 aa9.88□□□□□ -0.83
ERCC8-205ENST00000477893 ISY1Q9ULR0 285 aaKnown RBP9.88□□□□□ -0.83
ERCC8-205ENST00000477893 ROBO3Q96MS0 1386 aa9.88□□□□□ -0.83
ERCC8-205ENST00000477893 MAPK4P31152 587 aa9.87□□□□□ -0.83
ERCC8-205ENST00000477893 NUCB1Q02818 461 aa9.87□□□□□ -0.83
ERCC8-205ENST00000477893 PPARAQ07869 468 aa9.87□□□□□ -0.83
ERCC8-205ENST00000477893 FAM47AQ5JRC9 791 aa9.87□□□□□ -0.83
ERCC8-205ENST00000477893 FAM83BQ5T0W9 1011 aa9.87□□□□□ -0.83
ERCC8-205ENST00000477893 GIMAP6Q6P9H5 292 aa9.87□□□□□ -0.83
ERCC8-205ENST00000477893 GPR142Q7Z601 462 aa9.87□□□□□ -0.83
ERCC8-205ENST00000477893 PLEKHH3Q7Z736 793 aa9.87□□□□□ -0.83
ERCC8-205ENST00000477893 SIAH1Q8IUQ4 282 aa9.87□□□□□ -0.83
ERCC8-205ENST00000477893 PLPP6Q8IY26 295 aa9.87□□□□□ -0.83
ERCC8-205ENST00000477893 GTF3C2Q8WUA4 911 aaPredicted RBP9.87□□□□□ -0.83
ERCC8-205ENST00000477893 SHISA4Q96DD7 197 aa9.87□□□□□ -0.83
ERCC8-205ENST00000477893 ATG4CQ96DT6 458 aa9.87□□□□□ -0.83
ERCC8-205ENST00000477893 DEFB118Q96PH6 123 aa9.87□□□□□ -0.83
ERCC8-205ENST00000477893 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.87□□□□□ -0.83
ERCC8-205ENST00000477893 VCPKMTQ9H867 229 aa9.87□□□□□ -0.83
ERCC8-205ENST00000477893 GOPCQ9HD26 462 aa9.87□□□□□ -0.83
ERCC8-205ENST00000477893 INCENPQ9NQS7 918 aa9.87□□□□□ -0.83
ERCC8-205ENST00000477893 TMX2Q9Y320 296 aa9.87□□□□□ -0.83
ERCC8-205ENST00000477893 RABGAP1Q9Y3P9 1069 aa9.87□□□□□ -0.83
ERCC8-205ENST00000477893 KIAA0100Q14667 2235 aaKnown RBP9.87□□□□□ -0.83
ERCC8-205ENST00000477893 RBBP6Q7Z6E9 1792 aaKnown RBP9.86□□□□□ -0.83
ERCC8-205ENST00000477893 HMGCRP04035 888 aa9.86□□□□□ -0.83
ERCC8-205ENST00000477893 ZKSCAN1P17029 563 aaPredicted RBP9.86□□□□□ -0.83
ERCC8-205ENST00000477893 CCNA1P78396 465 aa9.86□□□□□ -0.83
ERCC8-205ENST00000477893 IRF5Q13568 498 aa9.86□□□□□ -0.83
ERCC8-205ENST00000477893 COG2Q14746 738 aa9.86□□□□□ -0.83
ERCC8-205ENST00000477893 CCL14Q16627 93 aa9.86□□□□□ -0.83
ERCC8-205ENST00000477893 ZNF589Q86UQ0 364 aaPredicted RBP9.86□□□□□ -0.83
ERCC8-205ENST00000477893 PLEKHM2Q8IWE5 1019 aa9.86□□□□□ -0.83
ERCC8-205ENST00000477893 ZNF444Q8N0Y2 327 aaPredicted RBP9.86□□□□□ -0.83
ERCC8-205ENST00000477893 LRRC47Q8N1G4 583 aaKnown RBP9.86□□□□□ -0.83
ERCC8-205ENST00000477893 SOCS4Q8WXH5 440 aa9.86□□□□□ -0.83
ERCC8-205ENST00000477893 TRIB2Q92519 343 aa9.86□□□□□ -0.83
ERCC8-205ENST00000477893 NUDT12Q9BQG2 462 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms