RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 CRNKL1Q9BZJ0 848 aaKnown RBP24.57■■□□□ 1.52
PDLIM1-202ENST00000477757 SH2D4AQ9H788 454 aa24.57■■□□□ 1.52
PDLIM1-202ENST00000477757 MCM9Q9NXL9 1143 aa24.57■■□□□ 1.52
PDLIM1-202ENST00000477757 DIS3Q9Y2L1 958 aaKnown RBP24.57■■□□□ 1.52
PDLIM1-202ENST00000477757 PLXNA1Q9UIW2 1896 aa24.57■■□□□ 1.52
PDLIM1-202ENST00000477757 MAGEB6P1A0A0J9YX57 407 aa24.56■■□□□ 1.52
PDLIM1-202ENST00000477757 WDR46O15213 610 aaKnown RBP24.56■■□□□ 1.52
PDLIM1-202ENST00000477757 TAL1P17542 331 aaPredicted RBP24.56■■□□□ 1.52
PDLIM1-202ENST00000477757 SPICE1Q8N0Z3 855 aa24.56■■□□□ 1.52
PDLIM1-202ENST00000477757 ATXN2LQ8WWM7 1075 aaKnown RBP24.56■■□□□ 1.52
PDLIM1-202ENST00000477757 FRAT1Q92837 279 aaPredicted RBP24.56■■□□□ 1.52
PDLIM1-202ENST00000477757 LENG1Q96BZ8 264 aaPredicted RBP24.56■■□□□ 1.52
PDLIM1-202ENST00000477757 TSEN34Q9BSV6 310 aaKnown RBP24.56■■□□□ 1.52
PDLIM1-202ENST00000477757 ARHGEF10LQ9HCE6 1279 aa24.56■■□□□ 1.52
PDLIM1-202ENST00000477757 TMX2Q9Y320 296 aa24.56■■□□□ 1.52
PDLIM1-202ENST00000477757 ZNFX1Q9P2E3 1918 aaKnown RBP24.56■■□□□ 1.52
PDLIM1-202ENST00000477757 COL11A1P12107 1806 aaPredicted RBP24.56■■□□□ 1.52
PDLIM1-202ENST00000477757 DCDC2CA8MYV0 355 aa24.55■■□□□ 1.52
PDLIM1-202ENST00000477757 BCAR3O75815 825 aa24.55■■□□□ 1.52
PDLIM1-202ENST00000477757 PGK2P07205 417 aa24.55■■□□□ 1.52
PDLIM1-202ENST00000477757 ZNF865P0CJ78 1059 aaPredicted RBP24.55■■□□□ 1.52
PDLIM1-202ENST00000477757 ZNF792Q3KQV3 632 aa24.55■■□□□ 1.52
PDLIM1-202ENST00000477757 CLEC10AQ8IUN9 316 aa24.55■■□□□ 1.52
PDLIM1-202ENST00000477757 SIAH1Q8IUQ4 282 aa24.55■■□□□ 1.52
PDLIM1-202ENST00000477757 SLC44A5Q8NCS7 719 aa24.55■■□□□ 1.52
PDLIM1-202ENST00000477757 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.55■■□□□ 1.52
PDLIM1-202ENST00000477757 VCPKMTQ9H867 229 aa24.55■■□□□ 1.52
PDLIM1-202ENST00000477757 TBX21Q9UL17 535 aa24.55■■□□□ 1.52
PDLIM1-202ENST00000477757 ADAMTS5Q9UNA0 930 aa24.55■■□□□ 1.52
PDLIM1-202ENST00000477757 ACLYP53396 1101 aa24.54■■□□□ 1.52
PDLIM1-202ENST00000477757 ICA1Q05084 483 aa24.54■■□□□ 1.52
PDLIM1-202ENST00000477757 KCTD2Q14681 263 aa24.54■■□□□ 1.52
PDLIM1-202ENST00000477757 AKNAD1Q5T1N1 836 aa24.54■■□□□ 1.52
PDLIM1-202ENST00000477757 RIOX2Q8IUF8 465 aa24.54■■□□□ 1.52
PDLIM1-202ENST00000477757 TMEM57Q8N5G2 664 aa24.54■■□□□ 1.52
PDLIM1-202ENST00000477757 GAS2L1Q99501 681 aaPredicted RBP24.54■■□□□ 1.52
PDLIM1-202ENST00000477757 STARD7Q9NQZ5 370 aa24.54■■□□□ 1.52
PDLIM1-202ENST00000477757 THEGQ9P2T0 379 aa24.54■■□□□ 1.52
PDLIM1-202ENST00000477757 SWAP70Q9UH65 585 aa24.54■■□□□ 1.52
PDLIM1-202ENST00000477757 MYH8P13535 1937 aa24.54■■□□□ 1.52
PDLIM1-202ENST00000477757 SYNRGQ9UMZ2 1314 aa24.54■■□□□ 1.52
PDLIM1-202ENST00000477757 NCOR1O75376 2440 aa24.53■■□□□ 1.52
PDLIM1-202ENST00000477757 TIMP1P01033 207 aa24.53■■□□□ 1.52
PDLIM1-202ENST00000477757 NUP133Q8WUM0 1156 aa24.53■■□□□ 1.52
PDLIM1-202ENST00000477757 CNPY2Q9Y2B0 182 aa24.53■■□□□ 1.52
PDLIM1-202ENST00000477757 CHD7Q9P2D1 2997 aa24.53■■□□□ 1.52
PDLIM1-202ENST00000477757 MOXD2PA6NHM9 499 aa24.52■■□□□ 1.52
PDLIM1-202ENST00000477757 PDE6AP16499 860 aa24.52■■□□□ 1.52
PDLIM1-202ENST00000477757 RASIP1Q5U651 963 aa24.52■■□□□ 1.52
PDLIM1-202ENST00000477757 SAMD1Q6SPF0 538 aaPredicted RBP24.52■■□□□ 1.52
PDLIM1-202ENST00000477757 ASB2Q96Q27 587 aa24.52■■□□□ 1.52
PDLIM1-202ENST00000477757 PBX4Q9BYU1 374 aa24.52■■□□□ 1.52
PDLIM1-202ENST00000477757 C1orf115Q9H7X2 142 aa24.52■■□□□ 1.52
PDLIM1-202ENST00000477757 DCP1AQ9NPI6 582 aaPredicted RBP24.52■■□□□ 1.52
PDLIM1-202ENST00000477757 CYP2D6P10635 497 aa24.51■■□□□ 1.51
PDLIM1-202ENST00000477757 COPB2P35606 906 aa24.51■■□□□ 1.51
PDLIM1-202ENST00000477757 PPIGQ13427 754 aaKnown RBP eCLIP24.51■■□□□ 1.512e-9■□□□□ 8
PDLIM1-202ENST00000477757 MFSD5Q6N075 450 aa24.51■■□□□ 1.51
PDLIM1-202ENST00000477757 CCDC174Q6PII3 467 aa24.51■■□□□ 1.51
PDLIM1-202ENST00000477757 ADAMTS19Q8TE59 1207 aa24.51■■□□□ 1.51
PDLIM1-202ENST00000477757 SDR42E1Q8WUS8 393 aa24.51■■□□□ 1.51
PDLIM1-202ENST00000477757 RAPGEFL1Q9UHV5 662 aa24.51■■□□□ 1.51
PDLIM1-202ENST00000477757 AKR1B1P15121 316 aa24.5■■□□□ 1.51
PDLIM1-202ENST00000477757 PBX2P40425 430 aa24.5■■□□□ 1.51
PDLIM1-202ENST00000477757 TTF1Q15361 905 aaPredicted RBP24.5■■□□□ 1.51
PDLIM1-202ENST00000477757 SLC9C2Q5TAH2 1124 aa24.5■■□□□ 1.51
PDLIM1-202ENST00000477757 CCSAPQ6IQ19 270 aaPredicted RBP24.5■■□□□ 1.51
PDLIM1-202ENST00000477757 MSL3Q8N5Y2 521 aaKnown RBP24.5■■□□□ 1.51
PDLIM1-202ENST00000477757 KLHDC9Q8NEP7 349 aa24.5■■□□□ 1.51
PDLIM1-202ENST00000477757 PRDM12Q9H4Q4 367 aa24.5■■□□□ 1.51
PDLIM1-202ENST00000477757 ZNF214Q9UL59 606 aaPredicted RBP24.5■■□□□ 1.51
PDLIM1-202ENST00000477757 MROH7Q68CQ1 1323 aa24.5■■□□□ 1.51
PDLIM1-202ENST00000477757 VWA5AO00534 786 aa24.49■■□□□ 1.51
PDLIM1-202ENST00000477757 TMEM240Q5SV17 173 aa24.49■■□□□ 1.51
PDLIM1-202ENST00000477757 C16orf59Q7L2K0 433 aa24.49■■□□□ 1.51
PDLIM1-202ENST00000477757 LCORLQ8N3X6 602 aa24.49■■□□□ 1.51
PDLIM1-202ENST00000477757 PPM1EQ8WY54 764 aa24.49■■□□□ 1.51
PDLIM1-202ENST00000477757 DYNLL2Q96FJ2 89 aa24.49■■□□□ 1.51
PDLIM1-202ENST00000477757 FBXO28Q9NVF7 368 aa24.49■■□□□ 1.51
PDLIM1-202ENST00000477757 CST5P28325 142 aaPredicted RBP24.48■■□□□ 1.51
PDLIM1-202ENST00000477757 STAT3P40763 770 aa24.48■■□□□ 1.51
PDLIM1-202ENST00000477757 CCDC129Q6ZRS4 1044 aa24.48■■□□□ 1.51
PDLIM1-202ENST00000477757 AACSQ86V21 672 aa24.48■■□□□ 1.51
PDLIM1-202ENST00000477757 SYNGAP1Q96PV0 1343 aa24.48■■□□□ 1.51
PDLIM1-202ENST00000477757 PPP1R9AQ9ULJ8 1098 aa24.48■■□□□ 1.51
PDLIM1-202ENST00000477757 ELP1O95163 1332 aa24.47■■□□□ 1.51
PDLIM1-202ENST00000477757 ZNF532Q9HCE3 1301 aa24.47■■□□□ 1.51
PDLIM1-202ENST00000477757 TCRBV5S4A2TA0A5A2 114 aa24.47■■□□□ 1.51
PDLIM1-202ENST00000477757 GRXCR1A8MXD5 290 aa24.47■■□□□ 1.51
PDLIM1-202ENST00000477757 PLA2G5P39877 138 aa24.47■■□□□ 1.51
PDLIM1-202ENST00000477757 KCNA10Q16322 511 aa24.47■■□□□ 1.51
PDLIM1-202ENST00000477757 PSRC1Q6PGN9 363 aaPredicted RBP24.47■■□□□ 1.51
PDLIM1-202ENST00000477757 REPS2Q8NFH8 660 aa24.47■■□□□ 1.51
PDLIM1-202ENST00000477757 CCDC17Q96LX7 622 aa24.47■■□□□ 1.51
PDLIM1-202ENST00000477757 FAM184BQ9ULE4 1060 aa24.47■■□□□ 1.51
PDLIM1-202ENST00000477757 CDK7P50613 346 aa24.46■■□□□ 1.51
PDLIM1-202ENST00000477757 MRPS5P82675 430 aaKnown RBP24.46■■□□□ 1.51
PDLIM1-202ENST00000477757 ADGRE1Q14246 886 aa24.46■■□□□ 1.51
PDLIM1-202ENST00000477757 ZKSCAN2Q63HK3 967 aa24.46■■□□□ 1.51
PDLIM1-202ENST00000477757 GLT1D1Q96MS3 346 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms