RNA–Protein interactions for RNA: ENST00000477741.5

NELFCD-205, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-205ENST00000477741 PPP2R5BQ15173 497 aa16.6■□□□□ 0.25
NELFCD-205ENST00000477741 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.6■□□□□ 0.255e-12■□□□□ 8.3
NELFCD-205ENST00000477741 TMX2Q9Y320 296 aa16.6■□□□□ 0.25
NELFCD-205ENST00000477741 SLC1A4P43007 532 aa16.6■□□□□ 0.25
NELFCD-205ENST00000477741 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.6■□□□□ 0.25
NELFCD-205ENST00000477741 SCYL3Q8IZE3 742 aa16.6■□□□□ 0.25
NELFCD-205ENST00000477741 CNKSR2Q8WXI2 1034 aa16.6■□□□□ 0.25
NELFCD-205ENST00000477741 C8orf76Q96K31 380 aa16.6■□□□□ 0.25
NELFCD-205ENST00000477741 RNF26Q9BY78 433 aaPredicted RBP16.6■□□□□ 0.25
NELFCD-205ENST00000477741 KCNJ14Q9UNX9 436 aa16.6■□□□□ 0.25
NELFCD-205ENST00000477741 MYH4Q9Y623 1939 aa16.59■□□□□ 0.25
NELFCD-205ENST00000477741 WDR33Q9C0J8 1336 aaKnown RBP16.59■□□□□ 0.25
NELFCD-205ENST00000477741 STK36Q9NRP7 1315 aa16.59■□□□□ 0.25
NELFCD-205ENST00000477741 H3BQV1 296 aa16.59■□□□□ 0.25
NELFCD-205ENST00000477741 PRPF3O43395 683 aaKnown RBP16.59■□□□□ 0.25
NELFCD-205ENST00000477741 IFFO2Q5TF58 517 aa16.59■□□□□ 0.25
NELFCD-205ENST00000477741 HOMER1Q86YM7 354 aa16.59■□□□□ 0.25
NELFCD-205ENST00000477741 TRIM22Q8IYM9 498 aa16.59■□□□□ 0.25
NELFCD-205ENST00000477741 ZNF408Q9H9D4 720 aa16.59■□□□□ 0.25
NELFCD-205ENST00000477741 ARHGEF10LQ9HCE6 1279 aa16.59■□□□□ 0.25
NELFCD-205ENST00000477741 VPS54Q9P1Q0 977 aa16.59■□□□□ 0.25
NELFCD-205ENST00000477741 DEXIO95424 95 aa16.58■□□□□ 0.25
NELFCD-205ENST00000477741 F13A1P00488 732 aa16.58■□□□□ 0.25
NELFCD-205ENST00000477741 PTPRAP18433 802 aa16.58■□□□□ 0.25
NELFCD-205ENST00000477741 PDCP20941 246 aa16.58■□□□□ 0.25
NELFCD-205ENST00000477741 VGLL4Q14135 290 aa16.58■□□□□ 0.25
NELFCD-205ENST00000477741 FBXO18Q8NFZ0 1043 aa16.58■□□□□ 0.25
NELFCD-205ENST00000477741 GPKOWQ92917 476 aaPredicted RBP eCLIP16.58■□□□□ 0.255e-8■□□□□ 10.7
NELFCD-205ENST00000477741 CLMNQ96JQ2 1002 aa16.58■□□□□ 0.25
NELFCD-205ENST00000477741 ADAMTS3O15072 1205 aa16.58■□□□□ 0.24
NELFCD-205ENST00000477741 SNAP25P60880 206 aa16.58■□□□□ 0.24
NELFCD-205ENST00000477741 KRT40Q6A162 431 aa16.58■□□□□ 0.24
NELFCD-205ENST00000477741 GMCL1P1Q8NEA9 526 aa16.58■□□□□ 0.24
NELFCD-205ENST00000477741 HOOK2Q96ED9 719 aa16.58■□□□□ 0.24
NELFCD-205ENST00000477741 PIGSQ96S52 555 aa16.58■□□□□ 0.24
NELFCD-205ENST00000477741 ZHX2Q9Y6X8 837 aa16.58■□□□□ 0.24
NELFCD-205ENST00000477741 KIF28PB7ZC32 967 aa16.57■□□□□ 0.24
NELFCD-205ENST00000477741 SPP2Q13103 211 aa16.57■□□□□ 0.24
NELFCD-205ENST00000477741 MTMR2Q13614 643 aa16.57■□□□□ 0.24
NELFCD-205ENST00000477741 ASPRV1Q53RT3 343 aa16.57■□□□□ 0.24
NELFCD-205ENST00000477741 PPP4R3BQ5MIZ7 849 aa16.57■□□□□ 0.24
NELFCD-205ENST00000477741 FAM83BQ5T0W9 1011 aa16.57■□□□□ 0.24
NELFCD-205ENST00000477741 MCTP1Q6DN14 999 aa16.57■□□□□ 0.24
NELFCD-205ENST00000477741 TYW1BQ6NUM6 668 aa16.57■□□□□ 0.24
NELFCD-205ENST00000477741 SNCAIPQ9Y6H5 919 aa16.57■□□□□ 0.24
NELFCD-205ENST00000477741 TRIM75PA6NK02 468 aa16.57■□□□□ 0.24
NELFCD-205ENST00000477741 GNAQP50148 359 aa16.57■□□□□ 0.24
NELFCD-205ENST00000477741 AKAP17AQ02040 695 aaKnown RBP16.57■□□□□ 0.24
NELFCD-205ENST00000477741 TTLL12Q14166 644 aaPredicted RBP16.57■□□□□ 0.24
NELFCD-205ENST00000477741 ADGRF4Q8IZF3 695 aa16.57■□□□□ 0.24
NELFCD-205ENST00000477741 FEZ1Q99689 392 aa16.57■□□□□ 0.24
NELFCD-205ENST00000477741 VCPKMTQ9H867 229 aa16.57■□□□□ 0.24
NELFCD-205ENST00000477741 USP17L10C9JJH3 530 aa16.56■□□□□ 0.24
NELFCD-205ENST00000477741 TMEM232C9JQI7 657 aa16.56■□□□□ 0.24
NELFCD-205ENST00000477741 PPP1R12BO60237 982 aaPredicted RBP16.56■□□□□ 0.24
NELFCD-205ENST00000477741 TAL1P17542 331 aaPredicted RBP16.56■□□□□ 0.24
NELFCD-205ENST00000477741 SPZ1Q9BXG8 430 aa16.56■□□□□ 0.24
NELFCD-205ENST00000477741 RIOX1Q9H6W3 641 aa16.56■□□□□ 0.24
NELFCD-205ENST00000477741 JMJD4Q9H9V9 463 aa16.56■□□□□ 0.24
NELFCD-205ENST00000477741 PICK1Q9NRD5 415 aa16.56■□□□□ 0.24
NELFCD-205ENST00000477741 KIF3AQ9Y496 699 aa16.56■□□□□ 0.24
NELFCD-205ENST00000477741 BMP3P12645 472 aa16.55■□□□□ 0.24
NELFCD-205ENST00000477741 MAP3K9P80192 1104 aa16.55■□□□□ 0.24
NELFCD-205ENST00000477741 RESTQ13127 1097 aa16.55■□□□□ 0.24
NELFCD-205ENST00000477741 PFKFB3Q16875 520 aaPredicted RBP16.55■□□□□ 0.24
NELFCD-205ENST00000477741 SAMD1Q6SPF0 538 aaPredicted RBP16.55■□□□□ 0.24
NELFCD-205ENST00000477741 DCAF4Q8WV16 495 aa16.55■□□□□ 0.24
NELFCD-205ENST00000477741 GMCL1Q96IK5 515 aa16.55■□□□□ 0.24
NELFCD-205ENST00000477741 ATAD5Q96QE3 1844 aa16.55■□□□□ 0.24
NELFCD-205ENST00000477741 BAG4O95429 457 aaKnown RBP16.55■□□□□ 0.24
NELFCD-205ENST00000477741 SCG2P13521 617 aa16.55■□□□□ 0.24
NELFCD-205ENST00000477741 NFKBIBQ15653 356 aa16.55■□□□□ 0.24
NELFCD-205ENST00000477741 GPATCH4Q5T3I0 446 aaKnown RBP16.55■□□□□ 0.24
NELFCD-205ENST00000477741 WWC2Q6AWC2 1192 aa16.55■□□□□ 0.24
NELFCD-205ENST00000477741 OXER1Q8TDS5 423 aa16.55■□□□□ 0.24
NELFCD-205ENST00000477741 ELP3Q9H9T3 547 aa16.55■□□□□ 0.24
NELFCD-205ENST00000477741 GDPD2Q9HCC8 539 aa16.55■□□□□ 0.24
NELFCD-205ENST00000477741 EMILIN3Q9NT22 766 aa16.55■□□□□ 0.24
NELFCD-205ENST00000477741 FBXO28Q9NVF7 368 aa16.55■□□□□ 0.24
NELFCD-205ENST00000477741 PPP1R11O60927 126 aaPredicted RBP16.54■□□□□ 0.24
NELFCD-205ENST00000477741 LDHDQ86WU2 507 aa16.54■□□□□ 0.24
NELFCD-205ENST00000477741 LZTS2Q9BRK4 669 aa16.54■□□□□ 0.24
NELFCD-205ENST00000477741 GOPCQ9HD26 462 aa16.54■□□□□ 0.24
NELFCD-205ENST00000477741 DNM1Q05193 864 aaKnown RBP16.54■□□□□ 0.24
NELFCD-205ENST00000477741 IKQ13123 557 aaPredicted RBP16.54■□□□□ 0.24
NELFCD-205ENST00000477741 NOL9Q5SY16 702 aaKnown RBP16.54■□□□□ 0.24
NELFCD-205ENST00000477741 HEATR3Q7Z4Q2 680 aa16.54■□□□□ 0.24
NELFCD-205ENST00000477741 ZNF280CQ8ND82 737 aa16.54■□□□□ 0.24
NELFCD-205ENST00000477741 BTBD18B2RXH4 712 aa16.53■□□□□ 0.24
NELFCD-205ENST00000477741 NF2P35240 595 aa16.53■□□□□ 0.24
NELFCD-205ENST00000477741 IREB2P48200 963 aaKnown RBP16.53■□□□□ 0.24
NELFCD-205ENST00000477741 HMGCS2P54868 508 aa16.53■□□□□ 0.24
NELFCD-205ENST00000477741 KIF23Q02241 960 aaPredicted RBP16.53■□□□□ 0.24
NELFCD-205ENST00000477741 NR5A1Q13285 461 aa16.53■□□□□ 0.24
NELFCD-205ENST00000477741 NPY5RQ15761 445 aa16.53■□□□□ 0.24
NELFCD-205ENST00000477741 NOM1Q5C9Z4 860 aaKnown RBP16.53■□□□□ 0.24
NELFCD-205ENST00000477741 WASF1Q92558 559 aa16.53■□□□□ 0.24
NELFCD-205ENST00000477741 FTOQ9C0B1 505 aaKnown RBP eCLIP16.53■□□□□ 0.24
NELFCD-205ENST00000477741 KIAA1683Q9H0B3 1180 aa16.53■□□□□ 0.24
NELFCD-205ENST00000477741 DOCK1Q14185 1865 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms