RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 TIMM10P62072 90 aa8.89□□□□□ -0.99
BRCA1-214ENST00000477152 MAP3K10Q02779 954 aa8.89□□□□□ -0.99
BRCA1-214ENST00000477152 MTX1Q13505 466 aa8.89□□□□□ -0.99
BRCA1-214ENST00000477152 RASGRF1Q13972 1273 aa8.89□□□□□ -0.99
BRCA1-214ENST00000477152 ATF7IPQ6VMQ6 1270 aa8.89□□□□□ -0.99
BRCA1-214ENST00000477152 DHX36Q9H2U1 1008 aaKnown RBP8.89□□□□□ -0.99
BRCA1-214ENST00000477152 GINM1Q9NU53 330 aa8.89□□□□□ -0.99
BRCA1-214ENST00000477152 RAI14Q9P0K7 980 aa8.89□□□□□ -0.99
BRCA1-214ENST00000477152 LRP2BPQ9P2M1 347 aa8.89□□□□□ -0.99
BRCA1-214ENST00000477152 HERC5Q9UII4 1024 aaKnown RBP8.89□□□□□ -0.99
BRCA1-214ENST00000477152 AFG3L2Q9Y4W6 797 aa8.89□□□□□ -0.99
BRCA1-214ENST00000477152 COL2A1P02458 1487 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-214ENST00000477152 ZBTB24O43167 697 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-214ENST00000477152 BCRP11274 1271 aa8.88□□□□□ -0.99
BRCA1-214ENST00000477152 CCL5P13501 91 aa8.88□□□□□ -0.99
BRCA1-214ENST00000477152 GJA8P48165 433 aa8.88□□□□□ -0.99
BRCA1-214ENST00000477152 RARSP54136 660 aaKnown RBP8.88□□□□□ -0.99
BRCA1-214ENST00000477152 OS9Q13438 667 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-214ENST00000477152 PLEKHM2Q8IWE5 1019 aa8.88□□□□□ -0.99
BRCA1-214ENST00000477152 SPATA5Q8NB90 893 aa8.88□□□□□ -0.99
BRCA1-214ENST00000477152 EMID1Q96A84 441 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-214ENST00000477152 ARHGAP39Q9C0H5 1083 aa8.88□□□□□ -0.99
BRCA1-214ENST00000477152 AGTPBP1Q9UPW5 1226 aa8.88□□□□□ -0.99
BRCA1-214ENST00000477152 PA2G4Q9UQ80 394 aaKnown RBP8.88□□□□□ -0.99
BRCA1-214ENST00000477152 ATRNL1Q5VV63 1379 aa8.88□□□□□ -0.99
BRCA1-214ENST00000477152 ADGRA2Q96PE1 1338 aa8.88□□□□□ -0.99
BRCA1-214ENST00000477152 PHF20L1A8MW92 1017 aa8.88□□□□□ -0.99
BRCA1-214ENST00000477152 ADCY3O60266 1144 aa8.88□□□□□ -0.99
BRCA1-214ENST00000477152 CLDN10P78369 228 aa8.88□□□□□ -0.99
BRCA1-214ENST00000477152 MECOMQ03112 1051 aa8.88□□□□□ -0.99
BRCA1-214ENST00000477152 TFCP2Q12800 502 aa8.88□□□□□ -0.99
BRCA1-214ENST00000477152 TMEM164Q5U3C3 297 aa8.88□□□□□ -0.99
BRCA1-214ENST00000477152 GPAT2Q6NUI2 795 aa8.88□□□□□ -0.99
BRCA1-214ENST00000477152 TMED8Q6PL24 325 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-214ENST00000477152 ANKLE1Q8NAG6 615 aa8.88□□□□□ -0.99
BRCA1-214ENST00000477152 MEIS3Q99687 375 aa8.88□□□□□ -0.99
BRCA1-214ENST00000477152 TRIM75PA6NK02 468 aa8.87□□□□□ -0.99
BRCA1-214ENST00000477152 RASA1P20936 1047 aa8.87□□□□□ -0.99
BRCA1-214ENST00000477152 ADORA1P30542 326 aa8.87□□□□□ -0.99
BRCA1-214ENST00000477152 OXLD1Q5BKU9 147 aa8.87□□□□□ -0.99
BRCA1-214ENST00000477152 TTC39AQ5SRH9 613 aa8.87□□□□□ -0.99
BRCA1-214ENST00000477152 CCAR1Q8IX12 1150 aaKnown RBP8.87□□□□□ -0.99
BRCA1-214ENST00000477152 ZNF280CQ8ND82 737 aa8.87□□□□□ -0.99
BRCA1-214ENST00000477152 GTF3C2Q8WUA4 911 aaPredicted RBP8.87□□□□□ -0.99
BRCA1-214ENST00000477152 C1QTNF2Q9BXJ5 285 aa8.87□□□□□ -0.99
BRCA1-214ENST00000477152 GPR108Q9NPR9 543 aa8.87□□□□□ -0.99
BRCA1-214ENST00000477152 TMOD4Q9NZQ9 345 aa8.87□□□□□ -0.99
BRCA1-214ENST00000477152 PI4KBQ9UBF8 816 aa8.87□□□□□ -0.99
BRCA1-214ENST00000477152 NOVA2Q9UNW9 492 aaKnown RBP8.87□□□□□ -0.99
BRCA1-214ENST00000477152 PTPRFP10586 1907 aa8.86□□□□□ -0.99
BRCA1-214ENST00000477152 TFRCP02786 760 aaKnown RBP8.86□□□□□ -0.99
BRCA1-214ENST00000477152 HLA-DOAP06340 250 aa8.86□□□□□ -0.99
BRCA1-214ENST00000477152 CYP2C8P10632 490 aa8.86□□□□□ -0.99
BRCA1-214ENST00000477152 ARID4AP29374 1257 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-214ENST00000477152 PRKCZQ05513 592 aa8.86□□□□□ -0.99
BRCA1-214ENST00000477152 FAM110CQ1W6H9 321 aa8.86□□□□□ -0.99
BRCA1-214ENST00000477152 NAA16Q6N069 864 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-214ENST00000477152 FOXP4Q8IVH2 680 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-214ENST00000477152 TEX11Q8IYF3 940 aa8.86□□□□□ -0.99
BRCA1-214ENST00000477152 TRMT44Q8IYL2 757 aaKnown RBP8.86□□□□□ -0.99
BRCA1-214ENST00000477152 CRACR2BQ8N4Y2 399 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-214ENST00000477152 FRAT1Q92837 279 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-214ENST00000477152 ATAD5Q96QE3 1844 aa8.86□□□□□ -0.99
BRCA1-214ENST00000477152 DDTLA6NHG4 134 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-214ENST00000477152 C19orf81C9J6K1 198 aa8.86□□□□□ -0.99
BRCA1-214ENST00000477152 FARP2O94887 1054 aaPredicted RBP8.86□□□□□ -0.99
BRCA1-214ENST00000477152 SGPL1O95470 568 aa8.86□□□□□ -0.99
BRCA1-214ENST00000477152 ASNSP08243 561 aa8.86□□□□□ -0.99
BRCA1-214ENST00000477152 MOGSQ13724 837 aa8.86□□□□□ -0.99
BRCA1-214ENST00000477152 ZKSCAN2Q63HK3 967 aa8.86□□□□□ -0.99
BRCA1-214ENST00000477152 ZFPM1Q8IX07 1006 aa8.86□□□□□ -0.99
BRCA1-214ENST00000477152 U2AF1L4Q8WU68 220 aaKnown RBP8.86□□□□□ -0.99
BRCA1-214ENST00000477152 NSUN4Q96CB9 384 aaKnown RBP8.86□□□□□ -0.99
BRCA1-214ENST00000477152 HMG20BQ9P0W2 317 aa8.86□□□□□ -0.99
BRCA1-214ENST00000477152 DOLKQ9UPQ8 538 aa8.86□□□□□ -0.99
BRCA1-214ENST00000477152 KIAA1024Q9UPX6 916 aa8.86□□□□□ -0.99
BRCA1-214ENST00000477152 RFX7Q2KHR2 1363 aa8.85□□□□□ -0.99
BRCA1-214ENST00000477152 ZSWIM8A7E2V4 1837 aa8.85□□□□□ -0.99
BRCA1-214ENST00000477152 USP17L15C9J2P7 530 aa8.85□□□□□ -0.99
BRCA1-214ENST00000477152 USP17L10C9JJH3 530 aa8.85□□□□□ -0.99
BRCA1-214ENST00000477152 USP17L13C9JLJ4 530 aa8.85□□□□□ -0.99
BRCA1-214ENST00000477152 USP17L12C9JPN9 530 aa8.85□□□□□ -0.99
BRCA1-214ENST00000477152 USP17L11C9JVI0 530 aa8.85□□□□□ -0.99
BRCA1-214ENST00000477152 USP17L21D6R901 530 aa8.85□□□□□ -0.99
BRCA1-214ENST00000477152 USP17L18D6R9N7 530 aa8.85□□□□□ -0.99
BRCA1-214ENST00000477152 USP17L22D6RA61 530 aa8.85□□□□□ -0.99
BRCA1-214ENST00000477152 USP17L17D6RBQ6 530 aa8.85□□□□□ -0.99
BRCA1-214ENST00000477152 USP17L19D6RCP7 530 aa8.85□□□□□ -0.99
BRCA1-214ENST00000477152 USP17L20D6RJB6 530 aa8.85□□□□□ -0.99
BRCA1-214ENST00000477152 H0YGN5 161 aa8.85□□□□□ -0.99
BRCA1-214ENST00000477152 CAP2P40123 477 aa8.85□□□□□ -0.99
BRCA1-214ENST00000477152 FLT3LGP49771 235 aa8.85□□□□□ -0.99
BRCA1-214ENST00000477152 IRX3P78415 501 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-214ENST00000477152 USP17L24Q0WX57 530 aa8.85□□□□□ -0.99
BRCA1-214ENST00000477152 PTK7Q13308 1070 aa8.85□□□□□ -0.99
BRCA1-214ENST00000477152 MTFR1Q15390 333 aa8.85□□□□□ -0.99
BRCA1-214ENST00000477152 LIAT1Q6ZQX7 453 aa8.85□□□□□ -0.99
BRCA1-214ENST00000477152 FTSJ3Q8IY81 847 aaKnown RBP8.85□□□□□ -0.99
BRCA1-214ENST00000477152 CWC22Q9HCG8 908 aaKnown RBP8.85□□□□□ -0.99
BRCA1-214ENST00000477152 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms