RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 SLFN14P0C7P3 912 aa18.74■□□□□ 0.59
TMEM53-208ENST00000476724 BTDP43251 543 aa18.74■□□□□ 0.59
TMEM53-208ENST00000476724 E4F1Q66K89 784 aaPredicted RBP18.74■□□□□ 0.59
TMEM53-208ENST00000476724 DGKHQ86XP1 1220 aa18.74■□□□□ 0.59
TMEM53-208ENST00000476724 SRBD1Q8N5C6 995 aaKnown RBP18.74■□□□□ 0.59
TMEM53-208ENST00000476724 PYM1Q9BRP8 204 aaKnown RBP18.74■□□□□ 0.59
TMEM53-208ENST00000476724 KCNQ5Q9NR82 932 aa18.74■□□□□ 0.59
TMEM53-208ENST00000476724 TRMT1Q9NXH9 659 aaKnown RBP18.74■□□□□ 0.59
TMEM53-208ENST00000476724 ADAMTSL1Q8N6G6 1762 aa18.74■□□□□ 0.59
TMEM53-208ENST00000476724 SCN9AQ15858 1988 aa18.74■□□□□ 0.59
TMEM53-208ENST00000476724 SNED1Q8TER0 1413 aa18.74■□□□□ 0.59
TMEM53-208ENST00000476724 LDHCP07864 332 aa18.73■□□□□ 0.59
TMEM53-208ENST00000476724 TOP1P11387 765 aaKnown RBP18.73■□□□□ 0.59
TMEM53-208ENST00000476724 SCG2P13521 617 aa18.73■□□□□ 0.59
TMEM53-208ENST00000476724 PPP4CP60510 307 aa18.73■□□□□ 0.59
TMEM53-208ENST00000476724 ZNF592Q92610 1267 aa18.73■□□□□ 0.59
TMEM53-208ENST00000476724 ANKS1AQ92625 1134 aa18.73■□□□□ 0.59
TMEM53-208ENST00000476724 BAG3O95817 575 aa18.73■□□□□ 0.59
TMEM53-208ENST00000476724 PRR29P0C7W0 189 aa18.73■□□□□ 0.59
TMEM53-208ENST00000476724 NPY5RQ15761 445 aa18.73■□□□□ 0.59
TMEM53-208ENST00000476724 PFKFB3Q16875 520 aaPredicted RBP18.73■□□□□ 0.59
TMEM53-208ENST00000476724 TTC38Q5R3I4 469 aa18.73■□□□□ 0.59
TMEM53-208ENST00000476724 PDILTQ8N807 584 aa18.73■□□□□ 0.59
TMEM53-208ENST00000476724 DPF2Q92785 391 aa18.73■□□□□ 0.59
TMEM53-208ENST00000476724 EYA3Q99504 573 aa18.73■□□□□ 0.59
TMEM53-208ENST00000476724 CCDC94Q9BW85 323 aaPredicted RBP18.73■□□□□ 0.59
TMEM53-208ENST00000476724 MCM9Q9NXL9 1143 aa18.73■□□□□ 0.59
TMEM53-208ENST00000476724 GPR75-ASB3A0A0A6YYF3 556 aa18.72■□□□□ 0.59
TMEM53-208ENST00000476724 F8W031 263 aaPredicted RBP18.72■□□□□ 0.59
TMEM53-208ENST00000476724 USP5P45974 858 aa18.72■□□□□ 0.59
TMEM53-208ENST00000476724 EARS2Q5JPH6 523 aaKnown RBP18.72■□□□□ 0.59
TMEM53-208ENST00000476724 FAM47AQ5JRC9 791 aa18.72■□□□□ 0.59
TMEM53-208ENST00000476724 SH3RF1Q7Z6J0 888 aa18.72■□□□□ 0.59
TMEM53-208ENST00000476724 TGFBRAP1Q8WUH2 860 aa18.72■□□□□ 0.59
TMEM53-208ENST00000476724 TMX1Q9H3N1 280 aa18.72■□□□□ 0.59
TMEM53-208ENST00000476724 ZNF646O15015 1829 aaPredicted RBP18.72■□□□□ 0.59
TMEM53-208ENST00000476724 FAM205CA6NFA0 338 aa18.72■□□□□ 0.59
TMEM53-208ENST00000476724 ZNF18P17022 549 aa18.72■□□□□ 0.59
TMEM53-208ENST00000476724 CALML3P27482 149 aa18.72■□□□□ 0.59
TMEM53-208ENST00000476724 PLCD1P51178 756 aa18.72■□□□□ 0.59
TMEM53-208ENST00000476724 NLRP5P59047 1200 aa18.72■□□□□ 0.59
TMEM53-208ENST00000476724 ATP2C1P98194 919 aaPredicted RBP18.72■□□□□ 0.59
TMEM53-208ENST00000476724 C12orf60Q5U649 245 aa18.72■□□□□ 0.59
TMEM53-208ENST00000476724 USP49Q70CQ1 688 aa18.72■□□□□ 0.59
TMEM53-208ENST00000476724 FCHSD1Q86WN1 690 aa18.72■□□□□ 0.59
TMEM53-208ENST00000476724 CERS3Q8IU89 383 aa18.72■□□□□ 0.59
TMEM53-208ENST00000476724 AMOTL1Q8IY63 956 aa18.72■□□□□ 0.59
TMEM53-208ENST00000476724 SLC16A10Q8TF71 515 aa18.72■□□□□ 0.59
TMEM53-208ENST00000476724 GSDMAQ96QA5 445 aa18.72■□□□□ 0.59
TMEM53-208ENST00000476724 SH3GLB2Q9NR46 395 aa18.72■□□□□ 0.59
TMEM53-208ENST00000476724 NFE2L3Q9Y4A8 694 aa18.72■□□□□ 0.59
TMEM53-208ENST00000476724 hCG_1642624A0A1W2PR95 340 aa18.71■□□□□ 0.59
TMEM53-208ENST00000476724 G3V3G9 751 aa18.71■□□□□ 0.59
TMEM53-208ENST00000476724 C21orf2O43822 256 aa18.71■□□□□ 0.59
TMEM53-208ENST00000476724 CDK11BP21127 795 aaKnown RBP18.71■□□□□ 0.59
TMEM53-208ENST00000476724 GNAQP50148 359 aa18.71■□□□□ 0.59
TMEM53-208ENST00000476724 DCAF8Q5TAQ9 597 aa18.71■□□□□ 0.59
TMEM53-208ENST00000476724 PDCL2Q8N4E4 241 aa18.71■□□□□ 0.59
TMEM53-208ENST00000476724 DHX58Q96C10 678 aa18.71■□□□□ 0.59
TMEM53-208ENST00000476724 PPP1R13BQ96KQ4 1090 aa18.71■□□□□ 0.59
TMEM53-208ENST00000476724 KAT14Q9H8E8 782 aa18.71■□□□□ 0.59
TMEM53-208ENST00000476724 GAKO14976 1311 aa18.71■□□□□ 0.59
TMEM53-208ENST00000476724 NMT2O60551 498 aa18.7■□□□□ 0.58
TMEM53-208ENST00000476724 ZBTB7AO95365 584 aa18.7■□□□□ 0.58
TMEM53-208ENST00000476724 RCSD1Q6JBY9 416 aa18.7■□□□□ 0.58
TMEM53-208ENST00000476724 MAPKAPK5Q8IW41 473 aa18.7■□□□□ 0.58
TMEM53-208ENST00000476724 SYMPKQ92797 1274 aaKnown RBP18.7■□□□□ 0.58
TMEM53-208ENST00000476724 EPSTI1Q96J88 318 aa18.7■□□□□ 0.58
TMEM53-208ENST00000476724 TCP11L1Q9NUJ3 509 aa18.7■□□□□ 0.58
TMEM53-208ENST00000476724 KIF13BQ9NQT8 1826 aa18.7■□□□□ 0.58
TMEM53-208ENST00000476724 RHBDL3P58872 404 aa18.7■□□□□ 0.58
TMEM53-208ENST00000476724 ZNF174Q15697 407 aa18.7■□□□□ 0.58
TMEM53-208ENST00000476724 AOC3Q16853 763 aa18.7■□□□□ 0.58
TMEM53-208ENST00000476724 DDX60LQ5H9U9 1706 aaKnown RBP18.7■□□□□ 0.58
TMEM53-208ENST00000476724 FAM163AQ96GL9 167 aaPredicted RBP18.7■□□□□ 0.58
TMEM53-208ENST00000476724 PAGE5Q96GU1 130 aa18.7■□□□□ 0.58
TMEM53-208ENST00000476724 DAGLAQ9Y4D2 1042 aa18.7■□□□□ 0.58
TMEM53-208ENST00000476724 FOCADQ5VW36 1801 aa18.7■□□□□ 0.58
TMEM53-208ENST00000476724 ROBO3Q96MS0 1386 aa18.69■□□□□ 0.58
TMEM53-208ENST00000476724 KCNA3P22001 575 aa18.69■□□□□ 0.58
TMEM53-208ENST00000476724 TFAP4Q01664 338 aa18.69■□□□□ 0.58
TMEM53-208ENST00000476724 PTGDRQ13258 359 aa18.69■□□□□ 0.58
TMEM53-208ENST00000476724 FAM177A1Q8N128 213 aaPredicted RBP18.69■□□□□ 0.58
TMEM53-208ENST00000476724 DPEP1P16444 411 aa18.69■□□□□ 0.58
TMEM53-208ENST00000476724 FMR1Q06787 632 aaKnown RBP eCLIP18.69■□□□□ 0.58
TMEM53-208ENST00000476724 NCBP1Q09161 790 aaKnown RBP18.69■□□□□ 0.58
TMEM53-208ENST00000476724 TBX2Q13207 712 aaPredicted RBP18.69■□□□□ 0.58
TMEM53-208ENST00000476724 ARL6IP4Q66PJ3 421 aaKnown RBP18.69■□□□□ 0.58
TMEM53-208ENST00000476724 CCDC125Q86Z20 511 aa18.69■□□□□ 0.58
TMEM53-208ENST00000476724 GRAMD1CQ8IYS0 662 aa18.69■□□□□ 0.58
TMEM53-208ENST00000476724 SAP30BPQ9UHR5 308 aaKnown RBP18.69■□□□□ 0.58
TMEM53-208ENST00000476724 TTF2Q9UNY4 1162 aaKnown RBP18.69■□□□□ 0.58
TMEM53-208ENST00000476724 MYH1P12882 1939 aa18.68■□□□□ 0.58
TMEM53-208ENST00000476724 ECE2O60344 883 aa18.68■□□□□ 0.58
TMEM53-208ENST00000476724 SCNN1DP51172 638 aa18.68■□□□□ 0.58
TMEM53-208ENST00000476724 PODNQ7Z5L7 613 aa18.68■□□□□ 0.58
TMEM53-208ENST00000476724 TEX11Q8IYF3 940 aa18.68■□□□□ 0.58
TMEM53-208ENST00000476724 IQUBQ8NA54 791 aa18.68■□□□□ 0.58
TMEM53-208ENST00000476724 DYNLL2Q96FJ2 89 aa18.68■□□□□ 0.58
TMEM53-208ENST00000476724 ZNF287Q9HBT7 754 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms