RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 SP3Q02447 781 aa34.68■■■■□ 3.14
HOXB3-208ENST00000476342 SEC23AQ15436 765 aa34.68■■■■□ 3.14
HOXB3-208ENST00000476342 MYPNQ86TC9 1320 aa34.68■■■■□ 3.14
HOXB3-208ENST00000476342 PNMA1Q8ND90 353 aa34.68■■■■□ 3.14
HOXB3-208ENST00000476342 MTMR7Q9Y216 660 aa34.68■■■■□ 3.14
HOXB3-208ENST00000476342 CASP8AP2Q9UKL3 1982 aa34.67■■■■□ 3.14
HOXB3-208ENST00000476342 BCRP11274 1271 aa34.67■■■■□ 3.14
HOXB3-208ENST00000476342 WTAPQ15007 396 aa34.67■■■■□ 3.14
HOXB3-208ENST00000476342 ADCK5Q3MIX3 580 aa34.67■■■■□ 3.14
HOXB3-208ENST00000476342 DCAF4Q8WV16 495 aa34.67■■■■□ 3.14
HOXB3-208ENST00000476342 PRDM10Q9NQV6 1147 aa34.67■■■■□ 3.14
HOXB3-208ENST00000476342 ISY1Q9ULR0 285 aaKnown RBP34.67■■■■□ 3.14
HOXB3-208ENST00000476342 RLFQ13129 1914 aa34.67■■■■□ 3.14
HOXB3-208ENST00000476342 SPDYE16A6NNV3 312 aaPredicted RBP34.66■■■■□ 3.14
HOXB3-208ENST00000476342 FAM110CQ1W6H9 321 aa34.66■■■■□ 3.14
HOXB3-208ENST00000476342 TMEM67Q5HYA8 995 aa34.66■■■■□ 3.14
HOXB3-208ENST00000476342 LBX2Q6XYB7 198 aa34.66■■■■□ 3.14
HOXB3-208ENST00000476342 ANKRD13CQ8N6S4 541 aa34.66■■■■□ 3.14
HOXB3-208ENST00000476342 TMEM87BQ96K49 555 aa34.66■■■■□ 3.14
HOXB3-208ENST00000476342 PSMA5P28066 241 aa34.64■■■■□ 3.14
HOXB3-208ENST00000476342 DSG3P32926 999 aa34.64■■■■□ 3.14
HOXB3-208ENST00000476342 JAKMIP1Q96N16 626 aaKnown RBP34.64■■■■□ 3.14
HOXB3-208ENST00000476342 FEM1BQ9UK73 627 aa34.64■■■■□ 3.14
HOXB3-208ENST00000476342 WDR19Q8NEZ3 1342 aa34.64■■■■□ 3.14
HOXB3-208ENST00000476342 CCDC96Q2M329 555 aa34.64■■■■□ 3.14
HOXB3-208ENST00000476342 DHX32Q7L7V1 743 aaKnown RBP34.64■■■■□ 3.14
HOXB3-208ENST00000476342 ERO1AQ96HE7 468 aa34.64■■■■□ 3.14
HOXB3-208ENST00000476342 SLF1Q9BQI6 1058 aa34.64■■■■□ 3.14
HOXB3-208ENST00000476342 PPP1R9AQ9ULJ8 1098 aa34.64■■■■□ 3.14
HOXB3-208ENST00000476342 PDHBP11177 359 aa34.63■■■■□ 3.13
HOXB3-208ENST00000476342 SAMD1Q6SPF0 538 aaPredicted RBP34.63■■■■□ 3.13
HOXB3-208ENST00000476342 IGDCC4Q8TDY8 1250 aa34.63■■■■□ 3.13
HOXB3-208ENST00000476342 CHMP4CQ96CF2 233 aa34.63■■■■□ 3.13
HOXB3-208ENST00000476342 PAGR1Q9BTK6 254 aa34.63■■■■□ 3.13
HOXB3-208ENST00000476342 FBXO28Q9NVF7 368 aa34.63■■■■□ 3.13
HOXB3-208ENST00000476342 MORF4L1Q9UBU8 362 aa34.63■■■■□ 3.13
HOXB3-208ENST00000476342 RABGAP1Q9Y3P9 1069 aa34.63■■■■□ 3.13
HOXB3-208ENST00000476342 SEC24BO95487 1268 aa34.62■■■■□ 3.13
HOXB3-208ENST00000476342 STAT2P52630 851 aa34.62■■■■□ 3.13
HOXB3-208ENST00000476342 KIF22Q14807 665 aa34.62■■■■□ 3.13
HOXB3-208ENST00000476342 KCTD1Q719H9 257 aa34.62■■■■□ 3.13
HOXB3-208ENST00000476342 MB21D1Q8N884 522 aa34.62■■■■□ 3.13
HOXB3-208ENST00000476342 A0A0G2JMZ2 1700 aa34.61■■■■□ 3.13
HOXB3-208ENST00000476342 TMEM232C9JQI7 657 aa34.61■■■■□ 3.13
HOXB3-208ENST00000476342 IKQ13123 557 aaPredicted RBP34.61■■■■□ 3.13
HOXB3-208ENST00000476342 BLOC1S2Q6QNY1 142 aa34.61■■■■□ 3.13
HOXB3-208ENST00000476342 RASGRP2Q7LDG7 609 aa34.61■■■■□ 3.13
HOXB3-208ENST00000476342 FAM160B2Q86V87 743 aa34.61■■■■□ 3.13
HOXB3-208ENST00000476342 TMTC2Q8N394 836 aa34.61■■■■□ 3.13
HOXB3-208ENST00000476342 PRPF38AQ8NAV1 312 aaKnown RBP34.61■■■■□ 3.13
HOXB3-208ENST00000476342 CHURC1Q8WUH1 139 aa34.61■■■■□ 3.13
HOXB3-208ENST00000476342 RBPJLQ9UBG7 517 aa34.61■■■■□ 3.13
HOXB3-208ENST00000476342 SNHG28P0DPA3 235 aa34.6■■■■□ 3.13
HOXB3-208ENST00000476342 LACTBP83111 547 aaPredicted RBP34.6■■■■□ 3.13
HOXB3-208ENST00000476342 COL9A3Q14050 684 aaPredicted RBP34.6■■■■□ 3.13
HOXB3-208ENST00000476342 GPRC5AQ8NFJ5 357 aa34.6■■■■□ 3.13
HOXB3-208ENST00000476342 ATG4CQ96DT6 458 aa34.6■■■■□ 3.13
HOXB3-208ENST00000476342 LY9Q9HBG7 655 aa34.6■■■■□ 3.13
HOXB3-208ENST00000476342 SH2B2O14492 632 aaPredicted RBP34.59■■■■□ 3.13
HOXB3-208ENST00000476342 PLA2G6O60733 806 aa34.59■■■■□ 3.13
HOXB3-208ENST00000476342 ERVK-9P63128 1117 aa34.59■■■■□ 3.13
HOXB3-208ENST00000476342 ERVK-24P63145 666 aa34.59■■■■□ 3.13
HOXB3-208ENST00000476342 GPATCH4Q5T3I0 446 aaKnown RBP34.59■■■■□ 3.13
HOXB3-208ENST00000476342 TXNRD2Q9NNW7 524 aa34.59■■■■□ 3.13
HOXB3-208ENST00000476342 LIFRP42702 1097 aa34.58■■■■□ 3.13
HOXB3-208ENST00000476342 EXOSC10Q01780 885 aaKnown RBP34.58■■■■□ 3.13
HOXB3-208ENST00000476342 ARHGEF6Q15052 776 aa34.58■■■■□ 3.13
HOXB3-208ENST00000476342 CD99L2Q8TCZ2 262 aa34.58■■■■□ 3.13
HOXB3-208ENST00000476342 ADAMTS5Q9UNA0 930 aa34.58■■■■□ 3.13
HOXB3-208ENST00000476342 CASTP20810 708 aaKnown RBP34.57■■■■□ 3.13
HOXB3-208ENST00000476342 ANAPC15P60006 121 aa34.57■■■■□ 3.13
HOXB3-208ENST00000476342 ZNF543Q08ER8 600 aa34.57■■■■□ 3.13
HOXB3-208ENST00000476342 CATIPQ7Z7H3 387 aa34.57■■■■□ 3.13
HOXB3-208ENST00000476342 KIFC2Q96AC6 838 aa34.57■■■■□ 3.13
HOXB3-208ENST00000476342 LRRC2Q9BYS8 371 aa34.57■■■■□ 3.13
HOXB3-208ENST00000476342 FRMPD2Q68DX3 1309 aaPredicted RBP34.57■■■■□ 3.12
HOXB3-208ENST00000476342 COL11A1P12107 1806 aaPredicted RBP34.57■■■■□ 3.12
HOXB3-208ENST00000476342 NFXL1Q6ZNB6 911 aa34.56■■■■□ 3.12
HOXB3-208ENST00000476342 SENP2Q9HC62 589 aa34.56■■■■□ 3.12
HOXB3-208ENST00000476342 CCDC69A6NI79 296 aa34.55■■■■□ 3.12
HOXB3-208ENST00000476342 VWA5AO00534 786 aa34.55■■■■□ 3.12
HOXB3-208ENST00000476342 CCNA1P78396 465 aa34.55■■■■□ 3.12
HOXB3-208ENST00000476342 ASPRV1Q53RT3 343 aa34.55■■■■□ 3.12
HOXB3-208ENST00000476342 POTEEQ6S8J3 1075 aa34.55■■■■□ 3.12
HOXB3-208ENST00000476342 TM6SF1Q9BZW5 370 aa34.55■■■■□ 3.12
HOXB3-208ENST00000476342 BTBD7Q9P203 1132 aa34.55■■■■□ 3.12
HOXB3-208ENST00000476342 CTDP1Q9Y5B0 961 aaPredicted RBP34.55■■■■□ 3.12
HOXB3-208ENST00000476342 MGAMO43451 1857 aa34.55■■■■□ 3.12
HOXB3-208ENST00000476342 CNMDO75829 334 aa34.55■■■■□ 3.12
HOXB3-208ENST00000476342 PARP1P09874 1014 aaKnown RBP34.55■■■■□ 3.12
HOXB3-208ENST00000476342 FDX1P10109 184 aa34.55■■■■□ 3.12
HOXB3-208ENST00000476342 FGD1P98174 961 aa34.55■■■■□ 3.12
HOXB3-208ENST00000476342 TCEANC2Q96MN5 208 aa34.55■■■■□ 3.12
HOXB3-208ENST00000476342 GPCPD1Q9NPB8 672 aa34.55■■■■□ 3.12
HOXB3-208ENST00000476342 GPHNQ9NQX3 736 aaPredicted RBP34.55■■■■□ 3.12
HOXB3-208ENST00000476342 RPS6KB1P23443 525 aa34.54■■■■□ 3.12
HOXB3-208ENST00000476342 FCGRTP55899 365 aa34.54■■■■□ 3.12
HOXB3-208ENST00000476342 PEX10O60683 326 aa34.53■■■■□ 3.12
HOXB3-208ENST00000476342 ZBED4O75132 1171 aa34.53■■■■□ 3.12
HOXB3-208ENST00000476342 CPA1P15085 419 aa34.53■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms