RNA–Protein interactions for RNA: ENST00000475955.1

SEMA3C-208, Transcript of semaphorin 3C, humanhuman

TSL 4

Gene SEMA3C, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-208ENST00000475955 R3HCC1Q9Y3T6 440 aaKnown RBP11.21□□□□□ -0.61
SEMA3C-208ENST00000475955 ZNFX1Q9P2E3 1918 aaKnown RBP11.21□□□□□ -0.62
SEMA3C-208ENST00000475955 A0A1W2PRG0 241 aa11.2□□□□□ -0.62
SEMA3C-208ENST00000475955 GSG1L2A8MUP6 293 aa11.2□□□□□ -0.62
SEMA3C-208ENST00000475955 M0R2C6 588 aa11.2□□□□□ -0.62
SEMA3C-208ENST00000475955 RNF113AO15541 343 aaKnown RBP11.2□□□□□ -0.62
SEMA3C-208ENST00000475955 PRMT2P55345 433 aa11.2□□□□□ -0.62
SEMA3C-208ENST00000475955 FCGRTP55899 365 aa11.2□□□□□ -0.62
SEMA3C-208ENST00000475955 MTFR1Q15390 333 aa11.2□□□□□ -0.62
SEMA3C-208ENST00000475955 ZYXQ15942 572 aaKnown RBP11.2□□□□□ -0.62
SEMA3C-208ENST00000475955 FAM110CQ1W6H9 321 aa11.2□□□□□ -0.62
SEMA3C-208ENST00000475955 KIAA1755Q5JYT7 1200 aa11.2□□□□□ -0.62
SEMA3C-208ENST00000475955 CTR9Q6PD62 1173 aa11.2□□□□□ -0.62
SEMA3C-208ENST00000475955 USP17L2Q6R6M4 530 aa11.2□□□□□ -0.62
SEMA3C-208ENST00000475955 CLEC10AQ8IUN9 316 aa11.2□□□□□ -0.62
SEMA3C-208ENST00000475955 CHMP4CQ96CF2 233 aa11.2□□□□□ -0.62
SEMA3C-208ENST00000475955 C12orf42Q96LP6 360 aa11.2□□□□□ -0.62
SEMA3C-208ENST00000475955 UPF3BQ9BZI7 483 aaKnown RBP11.2□□□□□ -0.62
SEMA3C-208ENST00000475955 TMOD4Q9NZQ9 345 aa11.2□□□□□ -0.62
SEMA3C-208ENST00000475955 RBPJLQ9UBG7 517 aa11.2□□□□□ -0.62
SEMA3C-208ENST00000475955 USP25Q9UHP3 1055 aa11.2□□□□□ -0.62
SEMA3C-208ENST00000475955 PNMA3Q9UL41 463 aa11.2□□□□□ -0.62
SEMA3C-208ENST00000475955 SLC4A4Q9Y6R1 1079 aa11.2□□□□□ -0.62
SEMA3C-208ENST00000475955 ELP1O95163 1332 aa11.19□□□□□ -0.62
SEMA3C-208ENST00000475955 A0A0G2JMZ2 1700 aa11.19□□□□□ -0.62
SEMA3C-208ENST00000475955 AKR1B1P15121 316 aa11.19□□□□□ -0.62
SEMA3C-208ENST00000475955 GCLCP48506 637 aaPredicted RBP11.19□□□□□ -0.62
SEMA3C-208ENST00000475955 CDK8P49336 464 aa11.19□□□□□ -0.62
SEMA3C-208ENST00000475955 FLT3LGP49771 235 aa11.19□□□□□ -0.62
SEMA3C-208ENST00000475955 AK2P54819 239 aa11.19□□□□□ -0.62
SEMA3C-208ENST00000475955 HERVK_113P62684 666 aa11.19□□□□□ -0.62
SEMA3C-208ENST00000475955 Q3C1V9 767 aa11.19□□□□□ -0.62
SEMA3C-208ENST00000475955 ZSCAN25Q6NSZ9 544 aa11.19□□□□□ -0.62
SEMA3C-208ENST00000475955 APPBP2Q92624 585 aa11.19□□□□□ -0.62
SEMA3C-208ENST00000475955 SEC62Q99442 399 aaKnown RBP11.19□□□□□ -0.62
SEMA3C-208ENST00000475955 KIAA1683Q9H0B3 1180 aa11.19□□□□□ -0.62
SEMA3C-208ENST00000475955 ZSWIM6Q9HCJ5 1215 aa11.19□□□□□ -0.62
SEMA3C-208ENST00000475955 EPB41L4AQ9HCS5 686 aaPredicted RBP11.19□□□□□ -0.62
SEMA3C-208ENST00000475955 PDRG1Q9NUG6 133 aa11.19□□□□□ -0.62
SEMA3C-208ENST00000475955 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.19□□□□□ -0.62
SEMA3C-208ENST00000475955 MORF4L1Q9UBU8 362 aa11.19□□□□□ -0.62
SEMA3C-208ENST00000475955 UQCRHLA0A096LP55 91 aa11.18□□□□□ -0.62
SEMA3C-208ENST00000475955 TNPO2O14787 897 aaKnown RBP11.18□□□□□ -0.62
SEMA3C-208ENST00000475955 CNMDO75829 334 aa11.18□□□□□ -0.62
SEMA3C-208ENST00000475955 CAVIN2O95810 425 aa11.18□□□□□ -0.62
SEMA3C-208ENST00000475955 UQCRHP07919 91 aa11.18□□□□□ -0.62
SEMA3C-208ENST00000475955 ELNP15502 786 aa11.18□□□□□ -0.62
SEMA3C-208ENST00000475955 VCAM1P19320 739 aa11.18□□□□□ -0.62
SEMA3C-208ENST00000475955 SYT1P21579 422 aa11.18□□□□□ -0.62
SEMA3C-208ENST00000475955 HOXD10P28358 340 aa11.18□□□□□ -0.62
SEMA3C-208ENST00000475955 GRK4P32298 578 aa11.18□□□□□ -0.62
SEMA3C-208ENST00000475955 PABPC4Q13310 644 aaKnown RBP eCLIP11.18□□□□□ -0.62
SEMA3C-208ENST00000475955 KRT32Q14532 448 aa11.18□□□□□ -0.62
SEMA3C-208ENST00000475955 FOXD4L5Q5VV16 416 aaPredicted RBP11.18□□□□□ -0.62
SEMA3C-208ENST00000475955 C16orf86Q6ZW13 317 aa11.18□□□□□ -0.62
SEMA3C-208ENST00000475955 NBPF11Q86T75 865 aa11.18□□□□□ -0.62
SEMA3C-208ENST00000475955 RAET1EQ8TD07 263 aa11.18□□□□□ -0.62
SEMA3C-208ENST00000475955 FOXD4L4Q8WXT5 416 aaPredicted RBP11.18□□□□□ -0.62
SEMA3C-208ENST00000475955 PIBF1Q8WXW3 757 aa11.18□□□□□ -0.62
SEMA3C-208ENST00000475955 CABP5Q9NP86 173 aa11.18□□□□□ -0.62
SEMA3C-208ENST00000475955 GJD2Q9UKL4 321 aa11.18□□□□□ -0.62
SEMA3C-208ENST00000475955 MPHOSPH10O00566 681 aaKnown RBP11.17□□□□□ -0.62
SEMA3C-208ENST00000475955 FOXP2O15409 715 aa11.17□□□□□ -0.62
SEMA3C-208ENST00000475955 GPAA1O43292 621 aa11.17□□□□□ -0.62
SEMA3C-208ENST00000475955 KDM4AO75164 1064 aa11.17□□□□□ -0.62
SEMA3C-208ENST00000475955 CCDC192P0DO97 292 aa11.17□□□□□ -0.62
SEMA3C-208ENST00000475955 CASTP20810 708 aaKnown RBP11.17□□□□□ -0.62
SEMA3C-208ENST00000475955 KRT85P78386 507 aa11.17□□□□□ -0.62
SEMA3C-208ENST00000475955 IRX3P78415 501 aaPredicted RBP11.17□□□□□ -0.62
SEMA3C-208ENST00000475955 CATSPERGQ6ZRH7 1159 aa11.17□□□□□ -0.62
SEMA3C-208ENST00000475955 RUFY3Q7L099 469 aa11.17□□□□□ -0.62
SEMA3C-208ENST00000475955 FEZ1Q99689 392 aa11.17□□□□□ -0.62
SEMA3C-208ENST00000475955 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.17□□□□□ -0.62
SEMA3C-208ENST00000475955 SWAP70Q9UH65 585 aa11.17□□□□□ -0.62
SEMA3C-208ENST00000475955 ALPK3Q96L96 1907 aa11.17□□□□□ -0.62
SEMA3C-208ENST00000475955 CEP290O15078 2479 aa11.16□□□□□ -0.62
SEMA3C-208ENST00000475955 ADCY3O60266 1144 aa11.16□□□□□ -0.62
SEMA3C-208ENST00000475955 ZFYP08048 801 aaPredicted RBP11.16□□□□□ -0.62
SEMA3C-208ENST00000475955 IRF5Q13568 498 aa11.16□□□□□ -0.62
SEMA3C-208ENST00000475955 SBK1Q52WX2 424 aa11.16□□□□□ -0.62
SEMA3C-208ENST00000475955 ZMYM1Q5SVZ6 1142 aa11.16□□□□□ -0.62
SEMA3C-208ENST00000475955 TMEM179Q6ZVK1 233 aa11.16□□□□□ -0.62
SEMA3C-208ENST00000475955 NOL8Q76FK4 1167 aaKnown RBP11.16□□□□□ -0.62
SEMA3C-208ENST00000475955 RNF214Q8ND24 703 aa11.16□□□□□ -0.62
SEMA3C-208ENST00000475955 MYRIPQ8NFW9 859 aa11.16□□□□□ -0.62
SEMA3C-208ENST00000475955 SHISA4Q96DD7 197 aa11.16□□□□□ -0.62
SEMA3C-208ENST00000475955 SCAND2PQ9GZW5 306 aaPredicted RBP11.16□□□□□ -0.62
SEMA3C-208ENST00000475955 PORCNQ9H237 461 aa11.16□□□□□ -0.62
SEMA3C-208ENST00000475955 RPAP3Q9H6T3 665 aaPredicted RBP11.16□□□□□ -0.62
SEMA3C-208ENST00000475955 SPTLC3Q9NUV7 552 aa11.16□□□□□ -0.62
SEMA3C-208ENST00000475955 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.16□□□□□ -0.62
SEMA3C-208ENST00000475955 FRMPD3Q5JV73 1810 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 USP17L15C9J2P7 530 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 USP17L13C9JLJ4 530 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 USP17L11C9JVI0 530 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 USP17L18D6R9N7 530 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 USP17L22D6RA61 530 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 USP17L17D6RBQ6 530 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 USP17L19D6RCP7 530 aa11.15□□□□□ -0.62
SEMA3C-208ENST00000475955 USP17L20D6RJB6 530 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms