RNA–Protein interactions for RNA: ENST00000475491.1

KCNIP3-206, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best)

Gene KCNIP3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-206ENST00000475491 CCDC39Q9UFE4 941 aa13.07□□□□□ -0.32
KCNIP3-206ENST00000475491 ANAPC4Q9UJX5 808 aa13.07□□□□□ -0.32
KCNIP3-206ENST00000475491 MMP1P03956 469 aa13.06□□□□□ -0.32
KCNIP3-206ENST00000475491 PARP1P09874 1014 aaKnown RBP13.06□□□□□ -0.32
KCNIP3-206ENST00000475491 ECE1P42892 770 aa13.06□□□□□ -0.32
KCNIP3-206ENST00000475491 EVCP57679 992 aa13.06□□□□□ -0.32
KCNIP3-206ENST00000475491 UBE2SQ16763 222 aa13.06□□□□□ -0.32
KCNIP3-206ENST00000475491 STYK1Q6J9G0 422 aa13.06□□□□□ -0.32
KCNIP3-206ENST00000475491 AOPEPQ8N6M6 819 aa13.06□□□□□ -0.32
KCNIP3-206ENST00000475491 EPSTI1Q96J88 318 aa13.06□□□□□ -0.32
KCNIP3-206ENST00000475491 CLSTN2Q9H4D0 955 aa13.06□□□□□ -0.32
KCNIP3-206ENST00000475491 DNAJC18Q9H819 358 aa13.06□□□□□ -0.32
KCNIP3-206ENST00000475491 PP2D1A8MPX8 630 aa13.06□□□□□ -0.32
KCNIP3-206ENST00000475491 PLCG2P16885 1265 aa13.06□□□□□ -0.32
KCNIP3-206ENST00000475491 PPP4CP60510 307 aa13.06□□□□□ -0.32
KCNIP3-206ENST00000475491 ARID5BQ14865 1188 aa13.06□□□□□ -0.32
KCNIP3-206ENST00000475491 CERKLQ49MI3 558 aaPredicted RBP13.06□□□□□ -0.32
KCNIP3-206ENST00000475491 FAM200AQ8TCP9 573 aa13.06□□□□□ -0.32
KCNIP3-206ENST00000475491 C7orf43Q8WVR3 580 aa13.06□□□□□ -0.32
KCNIP3-206ENST00000475491 DDX19AQ9NUU7 478 aaKnown RBP13.06□□□□□ -0.32
KCNIP3-206ENST00000475491 RREB1Q92766 1687 aa13.06□□□□□ -0.32
KCNIP3-206ENST00000475491 ZSCAN20P17040 1043 aaPredicted RBP13.06□□□□□ -0.32
KCNIP3-206ENST00000475491 PNOCQ13519 176 aa13.06□□□□□ -0.32
KCNIP3-206ENST00000475491 RRP1BQ14684 758 aaKnown RBP13.06□□□□□ -0.32
KCNIP3-206ENST00000475491 CCDC186Q7Z3E2 898 aa13.06□□□□□ -0.32
KCNIP3-206ENST00000475491 MRPS27Q92552 414 aaKnown RBP13.06□□□□□ -0.32
KCNIP3-206ENST00000475491 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.06□□□□□ -0.32
KCNIP3-206ENST00000475491 FAM205AQ6ZU69 1335 aa13.05□□□□□ -0.32
KCNIP3-206ENST00000475491 STRIP1Q5VSL9 837 aa13.05□□□□□ -0.32
KCNIP3-206ENST00000475491 GLIS2Q9BZE0 524 aaPredicted RBP13.05□□□□□ -0.32
KCNIP3-206ENST00000475491 EEF2P13639 858 aaKnown RBP13.05□□□□□ -0.32
KCNIP3-206ENST00000475491 PFKFB1P16118 471 aa13.05□□□□□ -0.32
KCNIP3-206ENST00000475491 UBXN2AP68543 259 aa13.05□□□□□ -0.32
KCNIP3-206ENST00000475491 LETM2Q2VYF4 491 aa13.05□□□□□ -0.32
KCNIP3-206ENST00000475491 DHX58Q96C10 678 aa13.05□□□□□ -0.32
KCNIP3-206ENST00000475491 TRERF1Q96PN7 1200 aa13.05□□□□□ -0.32
KCNIP3-206ENST00000475491 MAD2L2Q9UI95 211 aa13.05□□□□□ -0.32
KCNIP3-206ENST00000475491 ZKSCAN5Q9Y2L8 839 aa13.05□□□□□ -0.32
KCNIP3-206ENST00000475491 CEP350Q5VT06 3117 aa13.05□□□□□ -0.32
KCNIP3-206ENST00000475491 USP17L10C9JJH3 530 aa13.04□□□□□ -0.32
KCNIP3-206ENST00000475491 ORC4O43929 436 aa13.04□□□□□ -0.32
KCNIP3-206ENST00000475491 SCG2P13521 617 aa13.04□□□□□ -0.32
KCNIP3-206ENST00000475491 SHMT1P34896 483 aa13.04□□□□□ -0.32
KCNIP3-206ENST00000475491 WWC2Q6AWC2 1192 aa13.04□□□□□ -0.32
KCNIP3-206ENST00000475491 TAOK3Q9H2K8 898 aa13.04□□□□□ -0.32
KCNIP3-206ENST00000475491 POLR2DO15514 142 aaKnown RBP13.04□□□□□ -0.32
KCNIP3-206ENST00000475491 KRT2P35908 639 aa13.04□□□□□ -0.32
KCNIP3-206ENST00000475491 KLHL10Q6JEL2 608 aa13.04□□□□□ -0.32
KCNIP3-206ENST00000475491 ACER1Q8TDN7 264 aa13.04□□□□□ -0.32
KCNIP3-206ENST00000475491 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.04□□□□□ -0.32
KCNIP3-206ENST00000475491 RCOR1Q9UKL0 485 aa13.04□□□□□ -0.32
KCNIP3-206ENST00000475491 MAPK8IP1Q9UQF2 711 aa13.04□□□□□ -0.32
KCNIP3-206ENST00000475491 CNTNAP5Q8WYK1 1306 aa13.04□□□□□ -0.32
KCNIP3-206ENST00000475491 XBP1P17861 261 aa13.04□□□□□ -0.32
KCNIP3-206ENST00000475491 LMOD1P29536 600 aaPredicted RBP13.04□□□□□ -0.32
KCNIP3-206ENST00000475491 DPCR1Q3MIW9 517 aa13.04□□□□□ -0.32
KCNIP3-206ENST00000475491 SBK1Q52WX2 424 aa13.04□□□□□ -0.32
KCNIP3-206ENST00000475491 C16orf86Q6ZW13 317 aa13.04□□□□□ -0.32
KCNIP3-206ENST00000475491 ZNF592Q92610 1267 aa13.04□□□□□ -0.32
KCNIP3-206ENST00000475491 PDLIM2Q96JY6 352 aa13.04□□□□□ -0.32
KCNIP3-206ENST00000475491 TMOD2Q9NZR1 351 aa13.04□□□□□ -0.32
KCNIP3-206ENST00000475491 ZNF202O95125 648 aa13.03□□□□□ -0.32
KCNIP3-206ENST00000475491 SMC2O95347 1197 aa13.03□□□□□ -0.32
KCNIP3-206ENST00000475491 KIF5BP33176 963 aa13.03□□□□□ -0.32
KCNIP3-206ENST00000475491 TNNI2P48788 182 aa13.03□□□□□ -0.32
KCNIP3-206ENST00000475491 TERF1P54274 439 aa13.03□□□□□ -0.32
KCNIP3-206ENST00000475491 POLD4Q9HCU8 107 aa13.03□□□□□ -0.32
KCNIP3-206ENST00000475491 RGL2O15211 777 aa13.03□□□□□ -0.32
KCNIP3-206ENST00000475491 SYKP43405 635 aa13.03□□□□□ -0.32
KCNIP3-206ENST00000475491 FAM160A1Q05DH4 1040 aa13.03□□□□□ -0.32
KCNIP3-206ENST00000475491 SHC4Q6S5L8 630 aa13.03□□□□□ -0.32
KCNIP3-206ENST00000475491 RBAK-RBAKDNI3L0D1 243 aa13.03□□□□□ -0.32
KCNIP3-206ENST00000475491 SLC1A4P43007 532 aa13.03□□□□□ -0.32
KCNIP3-206ENST00000475491 FUCA2Q9BTY2 467 aa13.03□□□□□ -0.32
KCNIP3-206ENST00000475491 CSRNP2Q9H175 543 aa13.03□□□□□ -0.32
KCNIP3-206ENST00000475491 BLZF1Q9H2G9 400 aa13.03□□□□□ -0.32
KCNIP3-206ENST00000475491 SEC63Q9UGP8 760 aaKnown RBP13.03□□□□□ -0.32
KCNIP3-206ENST00000475491 NOL7Q9UMY1 257 aaKnown RBP13.03□□□□□ -0.32
KCNIP3-206ENST00000475491 CCDC194A0A1B0GVG4 234 aa13.02□□□□□ -0.32
KCNIP3-206ENST00000475491 ERCC3P19447 782 aa13.02□□□□□ -0.32
KCNIP3-206ENST00000475491 FUT2Q10981 343 aa13.02□□□□□ -0.32
KCNIP3-206ENST00000475491 PTGDRQ13258 359 aa13.02□□□□□ -0.32
KCNIP3-206ENST00000475491 SNW1Q13573 536 aaKnown RBP13.02□□□□□ -0.32
KCNIP3-206ENST00000475491 CCDC174Q6PII3 467 aa13.02□□□□□ -0.32
KCNIP3-206ENST00000475491 SMYD4Q8IYR2 804 aaPredicted RBP13.02□□□□□ -0.32
KCNIP3-206ENST00000475491 HOMER2Q9NSB8 354 aa13.02□□□□□ -0.32
KCNIP3-206ENST00000475491 MTMR4Q9NYA4 1195 aa13.02□□□□□ -0.32
KCNIP3-206ENST00000475491 PYCARDQ9ULZ3 195 aa13.02□□□□□ -0.32
KCNIP3-206ENST00000475491 ELP1O95163 1332 aa13.02□□□□□ -0.32
KCNIP3-206ENST00000475491 USP17L15C9J2P7 530 aa13.02□□□□□ -0.33
KCNIP3-206ENST00000475491 USP17L13C9JLJ4 530 aa13.02□□□□□ -0.33
KCNIP3-206ENST00000475491 USP17L11C9JVI0 530 aa13.02□□□□□ -0.33
KCNIP3-206ENST00000475491 USP17L18D6R9N7 530 aa13.02□□□□□ -0.33
KCNIP3-206ENST00000475491 USP17L22D6RA61 530 aa13.02□□□□□ -0.33
KCNIP3-206ENST00000475491 USP17L17D6RBQ6 530 aa13.02□□□□□ -0.33
KCNIP3-206ENST00000475491 USP17L19D6RCP7 530 aa13.02□□□□□ -0.33
KCNIP3-206ENST00000475491 USP17L20D6RJB6 530 aa13.02□□□□□ -0.33
KCNIP3-206ENST00000475491 ICA1Q05084 483 aa13.02□□□□□ -0.33
KCNIP3-206ENST00000475491 USP17L24Q0WX57 530 aa13.02□□□□□ -0.33
KCNIP3-206ENST00000475491 LONRF3Q496Y0 759 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms