RNA–Protein interactions for RNA: ENST00000474906.2

SENP6-206, Transcript of SUMO specific peptidase 6, humanhuman

TSL 3

Gene SENP6, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-206ENST00000474906 LILRA6Q6PI73 481 aa9.3□□□□□ -0.92
SENP6-206ENST00000474906 RNF111Q6ZNA4 994 aa9.3□□□□□ -0.92
SENP6-206ENST00000474906 NOTOA8MTQ0 251 aa9.29□□□□□ -0.92
SENP6-206ENST00000474906 RAG1P15918 1043 aa9.29□□□□□ -0.92
SENP6-206ENST00000474906 PDE6BP35913 854 aa9.29□□□□□ -0.92
SENP6-206ENST00000474906 GALK1P51570 392 aa9.29□□□□□ -0.92
SENP6-206ENST00000474906 DLG4P78352 724 aa9.29□□□□□ -0.92
SENP6-206ENST00000474906 ZNF552Q9H707 407 aaPredicted RBP9.29□□□□□ -0.92
SENP6-206ENST00000474906 BRMS1Q9HCU9 246 aa9.29□□□□□ -0.92
SENP6-206ENST00000474906 GMIPQ9P107 970 aa9.29□□□□□ -0.92
SENP6-206ENST00000474906 RAPGEFL1Q9UHV5 662 aa9.29□□□□□ -0.92
SENP6-206ENST00000474906 PCDHB14Q9Y5E9 798 aa9.29□□□□□ -0.92
SENP6-206ENST00000474906 ROBO2Q9HCK4 1378 aa9.28□□□□□ -0.92
SENP6-206ENST00000474906 ATE1O95260 518 aa9.28□□□□□ -0.92
SENP6-206ENST00000474906 ERCC3P19447 782 aa9.28□□□□□ -0.92
SENP6-206ENST00000474906 RPL10P27635 214 aaKnown RBP9.28□□□□□ -0.92
SENP6-206ENST00000474906 USHBP1Q8N6Y0 703 aa9.28□□□□□ -0.92
SENP6-206ENST00000474906 DAGLBQ8NCG7 672 aa9.28□□□□□ -0.92
SENP6-206ENST00000474906 FOXP3Q9BZS1 431 aa9.28□□□□□ -0.92
SENP6-206ENST00000474906 SUPT16HQ9Y5B9 1047 aaKnown RBP9.28□□□□□ -0.92
SENP6-206ENST00000474906 TEX51A0A1B0GUA7 166 aa9.27□□□□□ -0.93
SENP6-206ENST00000474906 GREM1O60565 184 aa9.27□□□□□ -0.93
SENP6-206ENST00000474906 USP2O75604 605 aaPredicted RBP9.27□□□□□ -0.93
SENP6-206ENST00000474906 EFEMP2O95967 443 aa9.27□□□□□ -0.93
SENP6-206ENST00000474906 EIF4A3P38919 411 aaKnown RBP9.27□□□□□ -0.93
SENP6-206ENST00000474906 NBPF12Q5TAG4 269 aaPredicted RBP9.27□□□□□ -0.93
SENP6-206ENST00000474906 OVOS1Q6IE37 1185 aa9.27□□□□□ -0.93
SENP6-206ENST00000474906 WAPLQ7Z5K2 1190 aa9.27□□□□□ -0.93
SENP6-206ENST00000474906 TMC3Q7Z5M5 1100 aa9.27□□□□□ -0.93
SENP6-206ENST00000474906 NLRX1Q86UT6 975 aa9.27□□□□□ -0.93
SENP6-206ENST00000474906 TCTN2Q96GX1 697 aa9.27□□□□□ -0.93
SENP6-206ENST00000474906 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.27□□□□□ -0.93
SENP6-206ENST00000474906 IRF2BPLQ9H1B7 796 aa9.27□□□□□ -0.93
SENP6-206ENST00000474906 INHBBP09529 407 aa9.26□□□□□ -0.93
SENP6-206ENST00000474906 POLR2BP30876 1174 aaKnown RBP9.26□□□□□ -0.93
SENP6-206ENST00000474906 SNW1Q13573 536 aaKnown RBP9.26□□□□□ -0.93
SENP6-206ENST00000474906 NBPF9Q3BBW0 867 aa9.26□□□□□ -0.93
SENP6-206ENST00000474906 ZNF655Q8N720 491 aaPredicted RBP9.26□□□□□ -0.93
SENP6-206ENST00000474906 MAP6Q96JE9 813 aa9.26□□□□□ -0.93
SENP6-206ENST00000474906 GCM1Q9NP62 436 aa9.26□□□□□ -0.93
SENP6-206ENST00000474906 ZMYM5Q9UJ78 669 aa9.26□□□□□ -0.93
SENP6-206ENST00000474906 TMEM82A0PJX8 343 aa9.25□□□□□ -0.93
SENP6-206ENST00000474906 CRKP46108 304 aa9.25□□□□□ -0.93
SENP6-206ENST00000474906 CDCP2Q5VXM1 449 aa9.25□□□□□ -0.93
SENP6-206ENST00000474906 TCFL5Q9UL49 500 aa9.25□□□□□ -0.93
SENP6-206ENST00000474906 KIR2DL1P43626 348 aaPredicted RBP9.24□□□□□ -0.93
SENP6-206ENST00000474906 KIR2DL2P43627 348 aaPredicted RBP9.24□□□□□ -0.93
SENP6-206ENST00000474906 PCBP3P57721 371 aaKnown RBP9.24□□□□□ -0.93
SENP6-206ENST00000474906 CCDC27Q2M243 656 aa9.24□□□□□ -0.93
SENP6-206ENST00000474906 BBS9Q3SYG4 887 aa9.24□□□□□ -0.93
SENP6-206ENST00000474906 TMEM132EQ6IEE7 984 aa9.24□□□□□ -0.93
SENP6-206ENST00000474906 SIRT2Q8IXJ6 389 aa9.24□□□□□ -0.93
SENP6-206ENST00000474906 SGPP1Q9BX95 441 aa9.24□□□□□ -0.93
SENP6-206ENST00000474906 CNNM2Q9H8M5 875 aa9.24□□□□□ -0.93
SENP6-206ENST00000474906 EHMT1Q9H9B1 1298 aa9.24□□□□□ -0.93
SENP6-206ENST00000474906 OR14I1A6ND48 311 aa9.23□□□□□ -0.93
SENP6-206ENST00000474906 NRDCO43847 1150 aa9.23□□□□□ -0.93
SENP6-206ENST00000474906 ADGRF1Q5T601 910 aa9.23□□□□□ -0.93
SENP6-206ENST00000474906 LINC00116Q8NCU8 138 aa9.23□□□□□ -0.93
SENP6-206ENST00000474906 ZNF296Q8WUU4 475 aaPredicted RBP9.23□□□□□ -0.93
SENP6-206ENST00000474906 HHIPL1Q96JK4 782 aa9.23□□□□□ -0.93
SENP6-206ENST00000474906 KRTAP4-2Q9BYR5 136 aa9.23□□□□□ -0.93
SENP6-206ENST00000474906 PRAMEF1O95521 474 aa9.22□□□□□ -0.93
SENP6-206ENST00000474906 RAD51AP2Q09MP3 1159 aa9.22□□□□□ -0.93
SENP6-206ENST00000474906 SLC14A2Q15849 920 aa9.22□□□□□ -0.93
SENP6-206ENST00000474906 CEP128Q6ZU80 1094 aa9.22□□□□□ -0.93
SENP6-206ENST00000474906 ATG4CQ96DT6 458 aa9.22□□□□□ -0.93
SENP6-206ENST00000474906 CNOT6Q9ULM6 557 aaKnown RBP9.22□□□□□ -0.93
SENP6-206ENST00000474906 SSU72P8A0A1W2PR75 194 aa9.21□□□□□ -0.94
SENP6-206ENST00000474906 SIGLEC6O43699 453 aa9.21□□□□□ -0.94
SENP6-206ENST00000474906 FKTNO75072 461 aa9.21□□□□□ -0.94
SENP6-206ENST00000474906 CLEC3AO75596 197 aa9.21□□□□□ -0.94
SENP6-206ENST00000474906 SYPP08247 313 aa9.21□□□□□ -0.94
SENP6-206ENST00000474906 ZPBP2Q6X784 338 aa9.21□□□□□ -0.94
SENP6-206ENST00000474906 NLRC3Q7RTR2 1065 aa9.21□□□□□ -0.94
SENP6-206ENST00000474906 ZNF512BQ96KM6 892 aaPredicted RBP9.21□□□□□ -0.94
SENP6-206ENST00000474906 PRDM14Q9GZV8 571 aa9.21□□□□□ -0.94
SENP6-206ENST00000474906 CRTAC1Q9NQ79 661 aa9.21□□□□□ -0.94
SENP6-206ENST00000474906 ADAMTS1Q9UHI8 967 aa9.21□□□□□ -0.94
SENP6-206ENST00000474906 CCNFP41002 786 aa9.2□□□□□ -0.94
SENP6-206ENST00000474906 CLCQ05315 142 aa9.2□□□□□ -0.94
SENP6-206ENST00000474906 SEZ6Q53EL9 994 aa9.2□□□□□ -0.94
SENP6-206ENST00000474906 HS2ST1Q7LGA3 356 aa9.2□□□□□ -0.94
SENP6-206ENST00000474906 UBP1Q9NZI7 540 aa9.2□□□□□ -0.94
SENP6-206ENST00000474906 GGT7Q9UJ14 662 aa9.2□□□□□ -0.94
SENP6-206ENST00000474906 NCANO14594 1321 aa9.2□□□□□ -0.94
SENP6-206ENST00000474906 HRKO00198 91 aa9.19□□□□□ -0.94
SENP6-206ENST00000474906 PRRG2O14669 202 aa9.19□□□□□ -0.94
SENP6-206ENST00000474906 GK5Q6ZS86 529 aa9.19□□□□□ -0.94
SENP6-206ENST00000474906 REXO1Q8N1G1 1221 aaKnown RBP9.19□□□□□ -0.94
SENP6-206ENST00000474906 MBD1Q9UIS9 605 aaPredicted RBP9.19□□□□□ -0.94
SENP6-206ENST00000474906 MINPP1Q9UNW1 487 aa9.19□□□□□ -0.94
SENP6-206ENST00000474906 KCTD3Q9Y597 815 aa9.19□□□□□ -0.94
SENP6-206ENST00000474906 B8ZZF3 427 aa9.18□□□□□ -0.94
SENP6-206ENST00000474906 SRSF3P84103 164 aaKnown RBP9.18□□□□□ -0.94
SENP6-206ENST00000474906 MRPL58Q14197 206 aaKnown RBP9.18□□□□□ -0.94
SENP6-206ENST00000474906 SSPNQ14714 243 aa9.18□□□□□ -0.94
SENP6-206ENST00000474906 ZNF385BQ569K4 471 aa9.18□□□□□ -0.94
SENP6-206ENST00000474906 FCRL2Q96LA5 508 aaPredicted RBP9.18□□□□□ -0.94
SENP6-206ENST00000474906 PLCD4Q9BRC7 762 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms