RNA–Protein interactions for RNA: ENST00000474839.5

SKIV2L-208, Transcript of Ski2 like RNA helicase, human

TSL 2

Gene SKIV2L, Length 3,378 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKIV2L-208	ENST00000474839	MAGEC2	Q9UBF1	373 aa	Predicted RBP	13.59	□□□□□ -0.23
SKIV2L-208	ENST00000474839	TTC26	A0AVF1	554 aa		13.59	□□□□□ -0.23
SKIV2L-208	ENST00000474839	FAM170A	A1A519	330 aa		13.59	□□□□□ -0.23
SKIV2L-208	ENST00000474839	STAT6	P42226	847 aa		13.59	□□□□□ -0.23
SKIV2L-208	ENST00000474839	MICALL1	Q8N3F8	863 aa		13.59	□□□□□ -0.23
SKIV2L-208	ENST00000474839	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.59	□□□□□ -0.23
SKIV2L-208	ENST00000474839	LPIN2	Q92539	896 aa		13.59	□□□□□ -0.23
SKIV2L-208	ENST00000474839	MAP2K7	O14733	419 aa		13.58	□□□□□ -0.23
SKIV2L-208	ENST00000474839	GYG1	P46976	350 aa		13.58	□□□□□ -0.23
SKIV2L-208	ENST00000474839	KLK7	P49862	253 aa		13.58	□□□□□ -0.23
SKIV2L-208	ENST00000474839	C2orf54	Q08AI8	447 aa		13.58	□□□□□ -0.23
SKIV2L-208	ENST00000474839	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.58	□□□□□ -0.23
SKIV2L-208	ENST00000474839	NAA15	Q9BXJ9	866 aa	Known RBP	13.58	□□□□□ -0.23
SKIV2L-208	ENST00000474839	ZBTB1	Q9Y2K1	713 aa		13.58	□□□□□ -0.23
SKIV2L-208	ENST00000474839	ABCC6	O95255	1503 aa		13.58	□□□□□ -0.23
SKIV2L-208	ENST00000474839	LAMA4	Q16363	1823 aa		13.58	□□□□□ -0.23
SKIV2L-208	ENST00000474839	PCDH11X	Q9BZA7	1347 aa		13.58	□□□□□ -0.24
SKIV2L-208	ENST00000474839	PCDH11Y	Q9BZA8	1340 aa		13.58	□□□□□ -0.24
SKIV2L-208	ENST00000474839	NDUFA10	O95299	355 aa		13.58	□□□□□ -0.24
SKIV2L-208	ENST00000474839	RNASE9	P60153	205 aa	Known RBP	13.58	□□□□□ -0.24
SKIV2L-208	ENST00000474839	SLC7A5	Q01650	507 aa		13.58	□□□□□ -0.24
SKIV2L-208	ENST00000474839	SMARCAL1	Q9NZC9	954 aa		13.58	□□□□□ -0.24
SKIV2L-208	ENST00000474839		B4DLN1	442 aa		13.58	□□□□□ -0.24
SKIV2L-208	ENST00000474839	IDE	P14735	1019 aa		13.58	□□□□□ -0.24
SKIV2L-208	ENST00000474839	IL2RB	P14784	551 aa		13.58	□□□□□ -0.24
SKIV2L-208	ENST00000474839	PRCP	P42785	496 aa		13.58	□□□□□ -0.24
SKIV2L-208	ENST00000474839	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.58	□□□□□ -0.24
SKIV2L-208	ENST00000474839	AFAP1L1	Q8TED9	768 aa		13.58	□□□□□ -0.24
SKIV2L-208	ENST00000474839	SAR1B	Q9Y6B6	198 aa		13.58	□□□□□ -0.24
SKIV2L-208	ENST00000474839	MRC1	P22897	1456 aa		13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	FAM237A	A0A1B0GTK4	181 aa		13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	IVL	P07476	585 aa		13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	CCDC96	Q2M329	555 aa		13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	BICDL1	Q6ZP65	573 aa		13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	IQCA1	Q86XH1	822 aa		13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	GSDMA	Q96QA5	445 aa		13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	UIMC1	Q96RL1	719 aa		13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	RNF41	Q9H4P4	317 aa	Predicted RBP	13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	CSF1R	P07333	972 aa		13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	STIM1	Q13586	685 aa		13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	TCP11X2	Q5H9J9	407 aa		13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	DZIP3	Q86Y13	1208 aa	Known RBP	13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	CTCFL	Q8NI51	663 aa	Predicted RBP	13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	UBXN6	Q9BZV1	441 aa		13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	TCRBV5S4A2T	A0A5A2	114 aa		13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	EIF3CL	B5ME19	914 aa	Known RBP	13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	ADAMTS3	O15072	1205 aa		13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	GGCX	P38435	758 aa		13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	WHAMMP3	Q1A5X7	153 aa		13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	CCDC178	Q5BJE1	867 aa		13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	MUM1L1	Q5H9M0	696 aa		13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	APTX	Q7Z2E3	356 aa	Known RBP	13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	KRT26	Q7Z3Y9	468 aa		13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	PIGB	Q92521	554 aa		13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	JAKMIP2	Q96AA8	810 aa		13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	SHISA4	Q96DD7	197 aa		13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	EIF3C	Q99613	913 aa	Known RBP	13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	EHD4	Q9H223	541 aa		13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	AGPAT5	Q9NUQ2	364 aa		13.57	□□□□□ -0.24
SKIV2L-208	ENST00000474839	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.57	□□□□□ -0.24	1e-7	■■□□□ 14.3
SKIV2L-208	ENST00000474839	WDR19	Q8NEZ3	1342 aa		13.56	□□□□□ -0.24
SKIV2L-208	ENST00000474839	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.56	□□□□□ -0.24
SKIV2L-208	ENST00000474839	MAGEB6P1	A0A0J9YX57	407 aa		13.56	□□□□□ -0.24
SKIV2L-208	ENST00000474839	PARP1	P09874	1014 aa	Known RBP	13.56	□□□□□ -0.24
SKIV2L-208	ENST00000474839	MTIF2	P46199	727 aa	Known RBP	13.56	□□□□□ -0.24
SKIV2L-208	ENST00000474839	E2F4	Q16254	413 aa		13.56	□□□□□ -0.24
SKIV2L-208	ENST00000474839	FAM98C	Q17RN3	349 aa	Known RBP	13.56	□□□□□ -0.24
SKIV2L-208	ENST00000474839	ADGRA1	Q86SQ6	560 aa		13.56	□□□□□ -0.24
SKIV2L-208	ENST00000474839	TMTC2	Q8N394	836 aa		13.56	□□□□□ -0.24
SKIV2L-208	ENST00000474839	ENAH	Q8N8S7	591 aa	Predicted RBP	13.56	□□□□□ -0.24
SKIV2L-208	ENST00000474839	OR8K1	Q8NGG5	319 aa		13.56	□□□□□ -0.24
SKIV2L-208	ENST00000474839	CENPH	Q9H3R5	247 aa		13.56	□□□□□ -0.24
SKIV2L-208	ENST00000474839	DEF6	Q9H4E7	631 aa		13.56	□□□□□ -0.24
SKIV2L-208	ENST00000474839	ATP2B2	Q01814	1243 aa		13.56	□□□□□ -0.24
SKIV2L-208	ENST00000474839	NT5DC1	Q5TFE4	455 aa		13.56	□□□□□ -0.24
SKIV2L-208	ENST00000474839	LRRC31	Q6UY01	552 aa		13.56	□□□□□ -0.24
SKIV2L-208	ENST00000474839	XDH	P47989	1333 aa		13.56	□□□□□ -0.24
SKIV2L-208	ENST00000474839	USP17L12	C9JPN9	530 aa		13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	USP17L21	D6R901	530 aa		13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	RPN1	P04843	607 aa	Known RBP	13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	UBA7	P41226	1012 aa		13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	ARHGAP25	P42331	645 aa		13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	CCT5	P48643	541 aa		13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	LIG3	P49916	1009 aa		13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	GTF2A1	P52655	376 aa	Predicted RBP	13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	TBC1D8B	Q0IIM8	1120 aa		13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	TTC31	Q49AM3	519 aa	Predicted RBP	13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	HPS3	Q969F9	1004 aa		13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	FAM107B	Q9H098	131 aa		13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	SAMM50	Q9Y512	469 aa		13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	WDR17	Q8IZU2	1322 aa		13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	OVOS2	A0A0G2JMS6	1433 aa		13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	ERVV-2	B6SEH9	535 aa		13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	PDE8A	O60658	829 aa		13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	PMS1	P54277	932 aa	Known RBP	13.55	□□□□□ -0.24
SKIV2L-208	ENST00000474839	MEX3C	Q5U5Q3	659 aa	Known RBP	13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms