RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 BTBD7Q9P203 1132 aa7.16□□□□□ -1.26
CPSF7-210ENST00000474684 MPHOSPH10O00566 681 aaKnown RBP7.15□□□□□ -1.26
CPSF7-210ENST00000474684 SGPL1O95470 568 aa7.15□□□□□ -1.26
CPSF7-210ENST00000474684 POLR3DP05423 398 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-210ENST00000474684 MAP3K21Q5TCX8 1036 aa7.15□□□□□ -1.26
CPSF7-210ENST00000474684 TTC6Q86TZ1 520 aa7.15□□□□□ -1.26
CPSF7-210ENST00000474684 CERS3Q8IU89 383 aa7.15□□□□□ -1.26
CPSF7-210ENST00000474684 USP6NLQ92738 828 aa7.15□□□□□ -1.26
CPSF7-210ENST00000474684 LRRCC1Q9C099 1032 aa7.15□□□□□ -1.26
CPSF7-210ENST00000474684 KIAA1683Q9H0B3 1180 aa7.15□□□□□ -1.26
CPSF7-210ENST00000474684 CRISPLD2Q9H0B8 497 aa7.15□□□□□ -1.26
CPSF7-210ENST00000474684 RPAP3Q9H6T3 665 aaPredicted RBP7.15□□□□□ -1.26
CPSF7-210ENST00000474684 FLRT1Q9NZU1 646 aa7.15□□□□□ -1.26
CPSF7-210ENST00000474684 PCDHB15Q9Y5E8 787 aa7.15□□□□□ -1.26
CPSF7-210ENST00000474684 ROBO3Q96MS0 1386 aa7.15□□□□□ -1.26
CPSF7-210ENST00000474684 M0R2C6 588 aa7.14□□□□□ -1.27
CPSF7-210ENST00000474684 PFASO15067 1338 aa7.14□□□□□ -1.27
CPSF7-210ENST00000474684 CCND3P30281 292 aaPredicted RBP7.14□□□□□ -1.27
CPSF7-210ENST00000474684 UBE3CQ15386 1083 aa7.14□□□□□ -1.27
CPSF7-210ENST00000474684 MORN1Q5T089 497 aa7.14□□□□□ -1.27
CPSF7-210ENST00000474684 CATSPERGQ6ZRH7 1159 aa7.14□□□□□ -1.27
CPSF7-210ENST00000474684 SIAH1Q8IUQ4 282 aa7.14□□□□□ -1.27
CPSF7-210ENST00000474684 SPICE1Q8N0Z3 855 aa7.14□□□□□ -1.27
CPSF7-210ENST00000474684 GPRC5AQ8NFJ5 357 aa7.14□□□□□ -1.27
CPSF7-210ENST00000474684 NKX2-3Q8TAU0 364 aa7.14□□□□□ -1.27
CPSF7-210ENST00000474684 SOCS4Q8WXH5 440 aa7.14□□□□□ -1.27
CPSF7-210ENST00000474684 PAWRQ96IZ0 340 aaKnown RBP7.14□□□□□ -1.27
CPSF7-210ENST00000474684 APBA2Q99767 749 aa7.14□□□□□ -1.27
CPSF7-210ENST00000474684 PRO3102Q9H379 93 aa7.14□□□□□ -1.27
CPSF7-210ENST00000474684 LAMA2P24043 3122 aaKnown RBP7.13□□□□□ -1.27
CPSF7-210ENST00000474684 SALL3Q9BXA9 1300 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 USP17L15C9J2P7 530 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 USP17L13C9JLJ4 530 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 USP17L12C9JPN9 530 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 BHMG1C9JSJ3 638 aaPredicted RBP7.13□□□□□ -1.27
CPSF7-210ENST00000474684 USP17L11C9JVI0 530 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 USP17L21D6R901 530 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 USP17L18D6R9N7 530 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 USP17L22D6RA61 530 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 USP17L17D6RBQ6 530 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 USP17L19D6RCP7 530 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 USP17L20D6RJB6 530 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 ZKSCAN1P17029 563 aaPredicted RBP7.13□□□□□ -1.27
CPSF7-210ENST00000474684 MAPK4P31152 587 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 CDK8P49336 464 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 RRP1P56182 461 aaKnown RBP7.13□□□□□ -1.27
CPSF7-210ENST00000474684 FOXK1P85037 733 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 ICA1Q05084 483 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 CACNB2Q08289 660 aaPredicted RBP7.13□□□□□ -1.27
CPSF7-210ENST00000474684 USP17L24Q0WX57 530 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 C12orf60Q5U649 245 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 WDR78Q5VTH9 848 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 TMED8Q6PL24 325 aaPredicted RBP7.13□□□□□ -1.27
CPSF7-210ENST00000474684 LBX2Q6XYB7 198 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 TMEM179Q6ZVK1 233 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 C16orf86Q6ZW13 317 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 PLEKHH3Q7Z736 793 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 STK11IPQ8N1F8 1099 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 KBTBD3Q8NAB2 608 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 NPLOC4Q8TAT6 608 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 PI4K2BQ8TCG2 481 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 DPF3Q92784 378 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 WNT2BQ93097 391 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 OSBP2Q969R2 916 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 GCC1Q96CN9 775 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 ATG4CQ96DT6 458 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 SEC62Q99442 399 aaKnown RBP7.13□□□□□ -1.27
CPSF7-210ENST00000474684 NUDT12Q9BQG2 462 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.13□□□□□ -1.27
CPSF7-210ENST00000474684 DCTPP1Q9H773 170 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 CABP5Q9NP86 173 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 ECHDC1Q9NTX5 307 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 FBXO28Q9NVF7 368 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 RBM27Q9P2N5 1060 aaKnown RBP7.13□□□□□ -1.27
CPSF7-210ENST00000474684 RABGAP1Q9Y3P9 1069 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 SLC4A4Q9Y6R1 1079 aa7.13□□□□□ -1.27
CPSF7-210ENST00000474684 BAZ2BQ9UIF8 2168 aaKnown RBP7.12□□□□□ -1.27
CPSF7-210ENST00000474684 RPTORQ8N122 1335 aa7.12□□□□□ -1.27
CPSF7-210ENST00000474684 GSG1L2A8MUP6 293 aa7.12□□□□□ -1.27
CPSF7-210ENST00000474684 FOXP2O15409 715 aa7.12□□□□□ -1.27
CPSF7-210ENST00000474684 TFRCP02786 760 aaKnown RBP7.12□□□□□ -1.27
CPSF7-210ENST00000474684 RGS2P41220 211 aa7.12□□□□□ -1.27
CPSF7-210ENST00000474684 USP14P54578 494 aa7.12□□□□□ -1.27
CPSF7-210ENST00000474684 MAP2K5Q13163 448 aa7.12□□□□□ -1.27
CPSF7-210ENST00000474684 GRB14Q14449 540 aa7.12□□□□□ -1.27
CPSF7-210ENST00000474684 CTR9Q6PD62 1173 aa7.12□□□□□ -1.27
CPSF7-210ENST00000474684 RASGRP2Q7LDG7 609 aa7.12□□□□□ -1.27
CPSF7-210ENST00000474684 C7orf61Q8IZ16 206 aa7.12□□□□□ -1.27
CPSF7-210ENST00000474684 TRPV1Q8NER1 839 aa7.12□□□□□ -1.27
CPSF7-210ENST00000474684 GTF3C2Q8WUA4 911 aaPredicted RBP7.12□□□□□ -1.27
CPSF7-210ENST00000474684 STRBPQ96SI9 672 aaKnown RBP7.12□□□□□ -1.27
CPSF7-210ENST00000474684 CRBNQ96SW2 442 aa7.12□□□□□ -1.27
CPSF7-210ENST00000474684 HTATIP2Q9BUP3 242 aa7.12□□□□□ -1.27
CPSF7-210ENST00000474684 MOV10L1Q9BXT6 1211 aaKnown RBP7.12□□□□□ -1.27
CPSF7-210ENST00000474684 TANGO6Q9C0B7 1094 aa7.12□□□□□ -1.27
CPSF7-210ENST00000474684 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.12□□□□□ -1.27
CPSF7-210ENST00000474684 VCPKMTQ9H867 229 aa7.12□□□□□ -1.27
CPSF7-210ENST00000474684 HMX1Q9NP08 348 aaPredicted RBP7.12□□□□□ -1.27
CPSF7-210ENST00000474684 SWAP70Q9UH65 585 aa7.12□□□□□ -1.27
CPSF7-210ENST00000474684 OGDHLQ9ULD0 1010 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms