RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.88■□□□□ 0.29
CCDC78-209ENST00000474647 BADQ92934 168 aa16.88■□□□□ 0.29
CCDC78-209ENST00000474647 MAML3Q96JK9 1138 aa16.88■□□□□ 0.29
CCDC78-209ENST00000474647 VCPKMTQ9H867 229 aa16.88■□□□□ 0.29
CCDC78-209ENST00000474647 PAG1Q9NWQ8 432 aa16.88■□□□□ 0.29
CCDC78-209ENST00000474647 LRRC41Q15345 812 aa16.87■□□□□ 0.29
CCDC78-209ENST00000474647 SHHQ15465 462 aa16.87■□□□□ 0.29
CCDC78-209ENST00000474647 C9orf50Q5SZB4 431 aa16.87■□□□□ 0.29
CCDC78-209ENST00000474647 BOLA2Q9H3K6 86 aa16.87■□□□□ 0.29
CCDC78-209ENST00000474647 PDLIM7Q9NR12 457 aa16.87■□□□□ 0.29
CCDC78-209ENST00000474647 TMX2Q9Y320 296 aa16.87■□□□□ 0.29
CCDC78-209ENST00000474647 SMIM22K7EJ46 135 aa16.86■□□□□ 0.29
CCDC78-209ENST00000474647 HMMRO75330 724 aa16.86■□□□□ 0.29
CCDC78-209ENST00000474647 TMEM132BQ14DG7 1078 aa16.86■□□□□ 0.29
CCDC78-209ENST00000474647 SIAH1Q8IUQ4 282 aa16.86■□□□□ 0.29
CCDC78-209ENST00000474647 ABRAQ8N0Z2 381 aa16.86■□□□□ 0.29
CCDC78-209ENST00000474647 DDRGK1Q96HY6 314 aa16.86■□□□□ 0.29
CCDC78-209ENST00000474647 MMP19Q99542 508 aa16.86■□□□□ 0.29
CCDC78-209ENST00000474647 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.86■□□□□ 0.29
CCDC78-209ENST00000474647 ATP8A2Q9NTI2 1148 aa16.86■□□□□ 0.29
CCDC78-209ENST00000474647 SLC25A27O95847 323 aa16.85■□□□□ 0.29
CCDC78-209ENST00000474647 PGK2P07205 417 aa16.85■□□□□ 0.29
CCDC78-209ENST00000474647 RARBP10826 455 aa16.85■□□□□ 0.29
CCDC78-209ENST00000474647 EEF2P13639 858 aaKnown RBP16.85■□□□□ 0.29
CCDC78-209ENST00000474647 ADD2P35612 726 aa16.85■□□□□ 0.29
CCDC78-209ENST00000474647 CDK8P49336 464 aa16.85■□□□□ 0.29
CCDC78-209ENST00000474647 SNX17Q15036 470 aa16.85■□□□□ 0.29
CCDC78-209ENST00000474647 SH3RF1Q7Z6J0 888 aa16.85■□□□□ 0.29
CCDC78-209ENST00000474647 CCDC17Q96LX7 622 aa16.85■□□□□ 0.29
CCDC78-209ENST00000474647 COL25A1Q9BXS0 654 aaPredicted RBP16.85■□□□□ 0.29
CCDC78-209ENST00000474647 XPNPEP3Q9NQH7 507 aa16.85■□□□□ 0.29
CCDC78-209ENST00000474647 FBXO28Q9NVF7 368 aa16.85■□□□□ 0.29
CCDC78-209ENST00000474647 USP17L12C9JPN9 530 aa16.84■□□□□ 0.29
CCDC78-209ENST00000474647 USP17L21D6R901 530 aa16.84■□□□□ 0.29
CCDC78-209ENST00000474647 CHGBP05060 677 aa16.84■□□□□ 0.29
CCDC78-209ENST00000474647 C12orf60Q5U649 245 aa16.84■□□□□ 0.29
CCDC78-209ENST00000474647 C16orf86Q6ZW13 317 aa16.84■□□□□ 0.29
CCDC78-209ENST00000474647 GOPCQ9HD26 462 aa16.84■□□□□ 0.29
CCDC78-209ENST00000474647 SLC4A4Q9Y6R1 1079 aa16.84■□□□□ 0.29
CCDC78-209ENST00000474647 TRIM43BA6NCK2 446 aa16.83■□□□□ 0.28
CCDC78-209ENST00000474647 PGK1P00558 417 aa16.83■□□□□ 0.28
CCDC78-209ENST00000474647 KCTD2Q14681 263 aa16.83■□□□□ 0.28
CCDC78-209ENST00000474647 RPAP2Q8IXW5 612 aaPredicted RBP16.83■□□□□ 0.28
CCDC78-209ENST00000474647 TRIM43Q96BQ3 446 aaPredicted RBP16.83■□□□□ 0.28
CCDC78-209ENST00000474647 LENG1Q96BZ8 264 aaPredicted RBP16.83■□□□□ 0.28
CCDC78-209ENST00000474647 TINF2Q9BSI4 451 aa16.83■□□□□ 0.28
CCDC78-209ENST00000474647 MS4A1P11836 297 aa16.82■□□□□ 0.28
CCDC78-209ENST00000474647 TLE2Q04725 743 aa16.82■□□□□ 0.28
CCDC78-209ENST00000474647 FAM83BQ5T0W9 1011 aa16.82■□□□□ 0.28
CCDC78-209ENST00000474647 RNF180Q86T96 592 aa16.82■□□□□ 0.28
CCDC78-209ENST00000474647 RIOX2Q8IUF8 465 aa16.82■□□□□ 0.28
CCDC78-209ENST00000474647 CDX2Q99626 313 aaPredicted RBP16.82■□□□□ 0.28
CCDC78-209ENST00000474647 KANSL2Q9H9L4 492 aa16.82■□□□□ 0.28
CCDC78-209ENST00000474647 PPP1R9AQ9ULJ8 1098 aa16.82■□□□□ 0.28
CCDC78-209ENST00000474647 PHF24Q9UPV7 400 aa16.82■□□□□ 0.28
CCDC78-209ENST00000474647 COG6Q9Y2V7 657 aa16.82■□□□□ 0.28
CCDC78-209ENST00000474647 MYO9BQ13459 2157 aa16.81■□□□□ 0.28
CCDC78-209ENST00000474647 ZBED9Q6R2W3 1325 aa16.81■□□□□ 0.28
CCDC78-209ENST00000474647 A0A1W2PQ45 241 aaPredicted RBP16.81■□□□□ 0.28
CCDC78-209ENST00000474647 A0A1W2PQY0 241 aa16.81■□□□□ 0.28
CCDC78-209ENST00000474647 VWA5AO00534 786 aa16.81■□□□□ 0.28
CCDC78-209ENST00000474647 PQBP1O60828 265 aaKnown RBP16.81■□□□□ 0.28
CCDC78-209ENST00000474647 RAB11FIP3O75154 756 aa16.81■□□□□ 0.28
CCDC78-209ENST00000474647 CLTBP09497 229 aa16.81■□□□□ 0.28
CCDC78-209ENST00000474647 TAL1P17542 331 aaPredicted RBP16.81■□□□□ 0.28
CCDC78-209ENST00000474647 ATP5JP18859 108 aa16.81■□□□□ 0.28
CCDC78-209ENST00000474647 STAT3P40763 770 aa16.81■□□□□ 0.28
CCDC78-209ENST00000474647 C1orf53Q5VUE5 145 aa16.81■□□□□ 0.28
CCDC78-209ENST00000474647 SIRT2Q8IXJ6 389 aa16.81■□□□□ 0.28
CCDC78-209ENST00000474647 STK11IPQ8N1F8 1099 aa16.81■□□□□ 0.28
CCDC78-209ENST00000474647 MAFAQ8NHW3 353 aaPredicted RBP16.81■□□□□ 0.28
CCDC78-209ENST00000474647 MYLIPQ8WY64 445 aa16.81■□□□□ 0.28
CCDC78-209ENST00000474647 RNPC3Q96LT9 517 aaKnown RBP16.81■□□□□ 0.28
CCDC78-209ENST00000474647 HAUS7Q99871 368 aa16.81■□□□□ 0.28
CCDC78-209ENST00000474647 DDX19BQ9UMR2 479 aa16.81■□□□□ 0.28
CCDC78-209ENST00000474647 LRRC37A2A6NM11 1700 aa16.81■□□□□ 0.28
CCDC78-209ENST00000474647 ROBO3Q96MS0 1386 aa16.8■□□□□ 0.28
CCDC78-209ENST00000474647 AKR1A1P14550 325 aa16.8■□□□□ 0.28
CCDC78-209ENST00000474647 SLC4A3P48751 1232 aa16.8■□□□□ 0.28
CCDC78-209ENST00000474647 ZNF792Q3KQV3 632 aa16.8■□□□□ 0.28
CCDC78-209ENST00000474647 CTR9Q6PD62 1173 aa16.8■□□□□ 0.28
CCDC78-209ENST00000474647 NUP88Q99567 741 aaPredicted RBP16.8■□□□□ 0.28
CCDC78-209ENST00000474647 SEMA6BQ9H3T3 888 aa16.8■□□□□ 0.28
CCDC78-209ENST00000474647 NRBP1Q9UHY1 535 aa16.8■□□□□ 0.28
CCDC78-209ENST00000474647 ZNF214Q9UL59 606 aaPredicted RBP16.8■□□□□ 0.28
CCDC78-209ENST00000474647 ADAMTS5Q9UNA0 930 aa16.8■□□□□ 0.28
CCDC78-209ENST00000474647 CNPY2Q9Y2B0 182 aa16.8■□□□□ 0.28
CCDC78-209ENST00000474647 TACC3Q9Y6A5 838 aa16.8■□□□□ 0.28
CCDC78-209ENST00000474647 SPTBN5Q9NRC6 3674 aaKnown RBP16.8■□□□□ 0.28
CCDC78-209ENST00000474647 RAG1P15918 1043 aa16.79■□□□□ 0.28
CCDC78-209ENST00000474647 ITGB8P26012 769 aa16.79■□□□□ 0.28
CCDC78-209ENST00000474647 COPB2P35606 906 aa16.79■□□□□ 0.28
CCDC78-209ENST00000474647 SMAD3P84022 425 aaKnown RBP16.79■□□□□ 0.28
CCDC78-209ENST00000474647 UBE3CQ15386 1083 aa16.79■□□□□ 0.28
CCDC78-209ENST00000474647 SNRNP48Q6IEG0 339 aaKnown RBP16.79■□□□□ 0.28
CCDC78-209ENST00000474647 ZSCAN25Q6NSZ9 544 aa16.79■□□□□ 0.28
CCDC78-209ENST00000474647 PUS7LQ9H0K6 701 aaKnown RBP16.79■□□□□ 0.28
CCDC78-209ENST00000474647 TTYH1Q9H313 450 aaPredicted RBP16.79■□□□□ 0.28
CCDC78-209ENST00000474647 ARPP21Q9UBL0 812 aaPredicted RBP16.79■□□□□ 0.28
CCDC78-209ENST00000474647 DIS3Q9Y2L1 958 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms