RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 WDR19Q8NEZ3 1342 aa18.48■□□□□ 0.55
COL1A1-204ENST00000474644 SPDYE16A6NNV3 312 aaPredicted RBP18.47■□□□□ 0.55
COL1A1-204ENST00000474644 SH2B2O14492 632 aaPredicted RBP18.47■□□□□ 0.55
COL1A1-204ENST00000474644 FLOT1O75955 427 aa18.47■□□□□ 0.55
COL1A1-204ENST00000474644 HMGB1P09429 215 aaKnown RBP18.47■□□□□ 0.55
COL1A1-204ENST00000474644 BMP3P12645 472 aa18.47■□□□□ 0.55
COL1A1-204ENST00000474644 SLC1A4P43007 532 aa18.47■□□□□ 0.55
COL1A1-204ENST00000474644 LBX1P52954 281 aa18.47■□□□□ 0.55
COL1A1-204ENST00000474644 EXOSC10Q01780 885 aaKnown RBP18.47■□□□□ 0.55
COL1A1-204ENST00000474644 WTAPQ15007 396 aa18.47■□□□□ 0.55
COL1A1-204ENST00000474644 DHX32Q7L7V1 743 aaKnown RBP18.47■□□□□ 0.55
COL1A1-204ENST00000474644 IGDCC4Q8TDY8 1250 aa18.47■□□□□ 0.55
COL1A1-204ENST00000474644 DCAF4Q8WV16 495 aa18.47■□□□□ 0.55
COL1A1-204ENST00000474644 CHMP4CQ96CF2 233 aa18.47■□□□□ 0.55
COL1A1-204ENST00000474644 TMEM87BQ96K49 555 aa18.47■□□□□ 0.55
COL1A1-204ENST00000474644 LY9Q9HBG7 655 aa18.47■□□□□ 0.55
COL1A1-204ENST00000474644 GPHNQ9NQX3 736 aaPredicted RBP18.47■□□□□ 0.55
COL1A1-204ENST00000474644 CPA4Q9UI42 421 aa18.47■□□□□ 0.55
COL1A1-204ENST00000474644 A0A0G2JMZ2 1700 aa18.46■□□□□ 0.55
COL1A1-204ENST00000474644 GPR25O00155 361 aa18.46■□□□□ 0.55
COL1A1-204ENST00000474644 SNHG28P0DPA3 235 aa18.46■□□□□ 0.55
COL1A1-204ENST00000474644 PDHBP11177 359 aa18.46■□□□□ 0.55
COL1A1-204ENST00000474644 BCRP11274 1271 aa18.46■□□□□ 0.55
COL1A1-204ENST00000474644 CPA1P15085 419 aa18.46■□□□□ 0.55
COL1A1-204ENST00000474644 PSMA5P28066 241 aa18.46■□□□□ 0.55
COL1A1-204ENST00000474644 NOM1Q5C9Z4 860 aaKnown RBP18.46■□□□□ 0.55
COL1A1-204ENST00000474644 C17orf99Q6UX52 265 aa18.46■□□□□ 0.55
COL1A1-204ENST00000474644 TCEANC2Q96MN5 208 aa18.46■□□□□ 0.55
COL1A1-204ENST00000474644 LRRC2Q9BYS8 371 aa18.46■□□□□ 0.55
COL1A1-204ENST00000474644 FBXO28Q9NVF7 368 aa18.46■□□□□ 0.55
COL1A1-204ENST00000474644 MYPNQ86TC9 1320 aa18.46■□□□□ 0.55
COL1A1-204ENST00000474644 CASTP20810 708 aaKnown RBP18.45■□□□□ 0.54
COL1A1-204ENST00000474644 GCLCP48506 637 aaPredicted RBP18.45■□□□□ 0.54
COL1A1-204ENST00000474644 ANAPC15P60006 121 aa18.45■□□□□ 0.54
COL1A1-204ENST00000474644 COG2Q14746 738 aa18.45■□□□□ 0.54
COL1A1-204ENST00000474644 CCDC96Q2M329 555 aa18.45■□□□□ 0.54
COL1A1-204ENST00000474644 BLOC1S2Q6QNY1 142 aa18.45■□□□□ 0.54
COL1A1-204ENST00000474644 POTEEQ6S8J3 1075 aa18.45■□□□□ 0.54
COL1A1-204ENST00000474644 LBX2Q6XYB7 198 aa18.45■□□□□ 0.54
COL1A1-204ENST00000474644 KCTD1Q719H9 257 aa18.45■□□□□ 0.54
COL1A1-204ENST00000474644 GTF3C2Q8WUA4 911 aaPredicted RBP18.45■□□□□ 0.54
COL1A1-204ENST00000474644 SLF1Q9BQI6 1058 aa18.45■□□□□ 0.54
COL1A1-204ENST00000474644 ISY1Q9ULR0 285 aaKnown RBP18.45■□□□□ 0.54
COL1A1-204ENST00000474644 RLFQ13129 1914 aa18.45■□□□□ 0.54
COL1A1-204ENST00000474644 PARP14Q460N5 1801 aa18.44■□□□□ 0.54
COL1A1-204ENST00000474644 RPS6KB1P23443 525 aa18.44■□□□□ 0.54
COL1A1-204ENST00000474644 DSG3P32926 999 aa18.44■□□□□ 0.54
COL1A1-204ENST00000474644 ZNF296Q8WUU4 475 aaPredicted RBP18.44■□□□□ 0.54
COL1A1-204ENST00000474644 ATG4CQ96DT6 458 aa18.44■□□□□ 0.54
COL1A1-204ENST00000474644 TM6SF1Q9BZW5 370 aa18.44■□□□□ 0.54
COL1A1-204ENST00000474644 TXNRD2Q9NNW7 524 aa18.44■□□□□ 0.54
COL1A1-204ENST00000474644 FEM1BQ9UK73 627 aa18.44■□□□□ 0.54
COL1A1-204ENST00000474644 PPP1R9AQ9ULJ8 1098 aa18.44■□□□□ 0.54
COL1A1-204ENST00000474644 FRMPD2Q68DX3 1309 aaPredicted RBP18.44■□□□□ 0.54
COL1A1-204ENST00000474644 TMEM232C9JQI7 657 aa18.43■□□□□ 0.54
COL1A1-204ENST00000474644 PEX10O60683 326 aa18.43■□□□□ 0.54
COL1A1-204ENST00000474644 LIFRP42702 1097 aa18.43■□□□□ 0.54
COL1A1-204ENST00000474644 ZNF543Q08ER8 600 aa18.43■□□□□ 0.54
COL1A1-204ENST00000474644 FAM110CQ1W6H9 321 aa18.43■□□□□ 0.54
COL1A1-204ENST00000474644 SAMD1Q6SPF0 538 aaPredicted RBP18.43■□□□□ 0.54
COL1A1-204ENST00000474644 ANKRD13CQ8N6S4 541 aa18.43■□□□□ 0.54
COL1A1-204ENST00000474644 IL17RAQ96F46 866 aa18.43■□□□□ 0.54
COL1A1-204ENST00000474644 PAGR1Q9BTK6 254 aa18.43■□□□□ 0.54
COL1A1-204ENST00000474644 ZSWIM6Q9HCJ5 1215 aa18.43■□□□□ 0.54
COL1A1-204ENST00000474644 HOXC10Q9NYD6 342 aa18.43■□□□□ 0.54
COL1A1-204ENST00000474644 RBPJLQ9UBG7 517 aa18.43■□□□□ 0.54
COL1A1-204ENST00000474644 MORF4L1Q9UBU8 362 aa18.43■□□□□ 0.54
COL1A1-204ENST00000474644 FKTNO75072 461 aa18.42■□□□□ 0.54
COL1A1-204ENST00000474644 CNMDO75829 334 aa18.42■□□□□ 0.54
COL1A1-204ENST00000474644 STAT2P52630 851 aa18.42■□□□□ 0.54
COL1A1-204ENST00000474644 SP3Q02447 781 aa18.42■□□□□ 0.54
COL1A1-204ENST00000474644 NFXL1Q6ZNB6 911 aa18.42■□□□□ 0.54
COL1A1-204ENST00000474644 RUFY3Q7L099 469 aa18.42■□□□□ 0.54
COL1A1-204ENST00000474644 KIFC2Q96AC6 838 aa18.42■□□□□ 0.54
COL1A1-204ENST00000474644 UPF3BQ9BZI7 483 aaKnown RBP18.42■□□□□ 0.54
COL1A1-204ENST00000474644 CCDC69A6NI79 296 aa18.41■□□□□ 0.54
COL1A1-204ENST00000474644 PLA2G6O60733 806 aa18.41■□□□□ 0.54
COL1A1-204ENST00000474644 GOLGA8HP0CJ92 632 aa18.41■□□□□ 0.54
COL1A1-204ENST00000474644 TROAPQ12815 778 aa18.41■□□□□ 0.54
COL1A1-204ENST00000474644 IKQ13123 557 aaPredicted RBP18.41■□□□□ 0.54
COL1A1-204ENST00000474644 GPATCH4Q5T3I0 446 aaKnown RBP18.41■□□□□ 0.54
COL1A1-204ENST00000474644 TTBK2Q6IQ55 1244 aa18.41■□□□□ 0.54
COL1A1-204ENST00000474644 CATIPQ7Z7H3 387 aa18.41■□□□□ 0.54
COL1A1-204ENST00000474644 FAM160B2Q86V87 743 aa18.41■□□□□ 0.54
COL1A1-204ENST00000474644 SGMS1Q86VZ5 419 aa18.41■□□□□ 0.54
COL1A1-204ENST00000474644 ZNF654Q8IZM8 581 aa18.41■□□□□ 0.54
COL1A1-204ENST00000474644 TMTC2Q8N394 836 aa18.41■□□□□ 0.54
COL1A1-204ENST00000474644 PRPF38AQ8NAV1 312 aaKnown RBP18.41■□□□□ 0.54
COL1A1-204ENST00000474644 GPCPD1Q9NPB8 672 aa18.41■□□□□ 0.54
COL1A1-204ENST00000474644 BTBD7Q9P203 1132 aa18.41■□□□□ 0.54
COL1A1-204ENST00000474644 ADAMTS5Q9UNA0 930 aa18.41■□□□□ 0.54
COL1A1-204ENST00000474644 RABGAP1Q9Y3P9 1069 aa18.41■□□□□ 0.54
COL1A1-204ENST00000474644 CYP46A1Q9Y6A2 500 aa18.41■□□□□ 0.54
COL1A1-204ENST00000474644 VWA5AO00534 786 aa18.4■□□□□ 0.54
COL1A1-204ENST00000474644 DDAH1O94760 285 aa18.4■□□□□ 0.54
COL1A1-204ENST00000474644 ERVK-9P63128 1117 aa18.4■□□□□ 0.54
COL1A1-204ENST00000474644 ERVK-24P63145 666 aa18.4■□□□□ 0.54
COL1A1-204ENST00000474644 LACTBP83111 547 aaPredicted RBP18.4■□□□□ 0.54
COL1A1-204ENST00000474644 ASPRV1Q53RT3 343 aa18.4■□□□□ 0.54
COL1A1-204ENST00000474644 BTNL9Q6UXG8 535 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms