RNA–Protein interactions for RNA: ENST00000474475.1

TNFRSF9-202, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-202ENST00000474475 KIAA1755Q5JYT7 1200 aa10.57□□□□□ -0.72
TNFRSF9-202ENST00000474475 C12orf60Q5U649 245 aa10.57□□□□□ -0.72
TNFRSF9-202ENST00000474475 TMEM179Q6ZVK1 233 aa10.57□□□□□ -0.72
TNFRSF9-202ENST00000474475 CCAR1Q8IX12 1150 aaKnown RBP10.57□□□□□ -0.72
TNFRSF9-202ENST00000474475 PUS7LQ9H0K6 701 aaKnown RBP10.57□□□□□ -0.72
TNFRSF9-202ENST00000474475 SLC4A4Q9Y6R1 1079 aa10.57□□□□□ -0.72
TNFRSF9-202ENST00000474475 A0A0G2JMZ2 1700 aa10.57□□□□□ -0.72
TNFRSF9-202ENST00000474475 ZKSCAN1P17029 563 aaPredicted RBP10.56□□□□□ -0.72
TNFRSF9-202ENST00000474475 PTPREP23469 700 aa10.56□□□□□ -0.72
TNFRSF9-202ENST00000474475 CDK8P49336 464 aa10.56□□□□□ -0.72
TNFRSF9-202ENST00000474475 CCNA1P78396 465 aa10.56□□□□□ -0.72
TNFRSF9-202ENST00000474475 CACNB2Q08289 660 aaPredicted RBP10.56□□□□□ -0.72
TNFRSF9-202ENST00000474475 MAP2K5Q13163 448 aa10.56□□□□□ -0.72
TNFRSF9-202ENST00000474475 TSHZ3Q63HK5 1081 aa10.56□□□□□ -0.72
TNFRSF9-202ENST00000474475 ZSCAN25Q6NSZ9 544 aa10.56□□□□□ -0.72
TNFRSF9-202ENST00000474475 NECAB2Q7Z6G3 386 aa10.56□□□□□ -0.72
TNFRSF9-202ENST00000474475 TRMT44Q8IYL2 757 aaKnown RBP10.56□□□□□ -0.72
TNFRSF9-202ENST00000474475 ANKLE1Q8NAG6 615 aa10.56□□□□□ -0.72
TNFRSF9-202ENST00000474475 APBA2Q99767 749 aa10.56□□□□□ -0.72
TNFRSF9-202ENST00000474475 RBM27Q9P2N5 1060 aaKnown RBP10.56□□□□□ -0.72
TNFRSF9-202ENST00000474475 NR2E3Q9Y5X4 410 aa10.56□□□□□ -0.72
TNFRSF9-202ENST00000474475 SLC15A5A6NIM6 579 aa10.55□□□□□ -0.72
TNFRSF9-202ENST00000474475 EVI5O60447 810 aa10.55□□□□□ -0.72
TNFRSF9-202ENST00000474475 GLRX3O76003 335 aaKnown RBP10.55□□□□□ -0.72
TNFRSF9-202ENST00000474475 CCND3P30281 292 aaPredicted RBP10.55□□□□□ -0.72
TNFRSF9-202ENST00000474475 ICA1Q05084 483 aa10.55□□□□□ -0.72
TNFRSF9-202ENST00000474475 COG2Q14746 738 aa10.55□□□□□ -0.72
TNFRSF9-202ENST00000474475 WDR78Q5VTH9 848 aa10.55□□□□□ -0.72
TNFRSF9-202ENST00000474475 CTR9Q6PD62 1173 aa10.55□□□□□ -0.72
TNFRSF9-202ENST00000474475 C16orf86Q6ZW13 317 aa10.55□□□□□ -0.72
TNFRSF9-202ENST00000474475 KBTBD3Q8NAB2 608 aa10.55□□□□□ -0.72
TNFRSF9-202ENST00000474475 STRBPQ96SI9 672 aaKnown RBP10.55□□□□□ -0.72
TNFRSF9-202ENST00000474475 TANGO6Q9C0B7 1094 aa10.55□□□□□ -0.72
TNFRSF9-202ENST00000474475 PRO3102Q9H379 93 aa10.55□□□□□ -0.72
TNFRSF9-202ENST00000474475 CWC22Q9HCG8 908 aaKnown RBP10.55□□□□□ -0.72
TNFRSF9-202ENST00000474475 FLRT1Q9NZU1 646 aa10.55□□□□□ -0.72
TNFRSF9-202ENST00000474475 OGDHLQ9ULD0 1010 aa10.55□□□□□ -0.72
TNFRSF9-202ENST00000474475 TMX2Q9Y320 296 aa10.55□□□□□ -0.72
TNFRSF9-202ENST00000474475 PCDHB15Q9Y5E8 787 aa10.55□□□□□ -0.72
TNFRSF9-202ENST00000474475 PARP14Q460N5 1801 aa10.55□□□□□ -0.72
TNFRSF9-202ENST00000474475 CEP290O15078 2479 aa10.54□□□□□ -0.72
TNFRSF9-202ENST00000474475 GRB14Q14449 540 aa10.54□□□□□ -0.72
TNFRSF9-202ENST00000474475 AMOTL1Q8IY63 956 aa10.54□□□□□ -0.72
TNFRSF9-202ENST00000474475 SPICE1Q8N0Z3 855 aa10.54□□□□□ -0.72
TNFRSF9-202ENST00000474475 NPLOC4Q8TAT6 608 aa10.54□□□□□ -0.72
TNFRSF9-202ENST00000474475 LPAR1Q92633 364 aa10.54□□□□□ -0.72
TNFRSF9-202ENST00000474475 DDRGK1Q96HY6 314 aa10.54□□□□□ -0.72
TNFRSF9-202ENST00000474475 CCDC17Q96LX7 622 aa10.54□□□□□ -0.72
TNFRSF9-202ENST00000474475 MOV10L1Q9BXT6 1211 aaKnown RBP10.54□□□□□ -0.72
TNFRSF9-202ENST00000474475 NBPF3Q9H094 633 aa10.54□□□□□ -0.72
TNFRSF9-202ENST00000474475 VCPKMTQ9H867 229 aa10.54□□□□□ -0.72
TNFRSF9-202ENST00000474475 ARHGEF10LQ9HCE6 1279 aa10.54□□□□□ -0.72
TNFRSF9-202ENST00000474475 HOXC10Q9NYD6 342 aa10.54□□□□□ -0.72
TNFRSF9-202ENST00000474475 ARPP21Q9UBL0 812 aaPredicted RBP10.54□□□□□ -0.72
TNFRSF9-202ENST00000474475 FRMPD3Q5JV73 1810 aa10.54□□□□□ -0.72
TNFRSF9-202ENST00000474475 ZNF236Q9UL36 1845 aa10.54□□□□□ -0.72
TNFRSF9-202ENST00000474475 GREB1LQ9C091 1923 aaPredicted RBP10.53□□□□□ -0.72
TNFRSF9-202ENST00000474475 GSG1L2A8MUP6 293 aa10.53□□□□□ -0.72
TNFRSF9-202ENST00000474475 TULP1O00294 542 aaPredicted RBP10.53□□□□□ -0.72
TNFRSF9-202ENST00000474475 RNF113AO15541 343 aaKnown RBP10.53□□□□□ -0.72
TNFRSF9-202ENST00000474475 HOXC6P09630 235 aa10.53□□□□□ -0.72
TNFRSF9-202ENST00000474475 EEF2P13639 858 aaKnown RBP10.53□□□□□ -0.72
TNFRSF9-202ENST00000474475 SBK1Q52WX2 424 aa10.53□□□□□ -0.72
TNFRSF9-202ENST00000474475 APPBP2Q92624 585 aa10.53□□□□□ -0.72
TNFRSF9-202ENST00000474475 OSBP2Q969R2 916 aa10.53□□□□□ -0.72
TNFRSF9-202ENST00000474475 ATG4CQ96DT6 458 aa10.53□□□□□ -0.72
TNFRSF9-202ENST00000474475 GPATCH3Q96I76 525 aa10.53□□□□□ -0.72
TNFRSF9-202ENST00000474475 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.53□□□□□ -0.72
TNFRSF9-202ENST00000474475 SPATC1LQ9H0A9 340 aa10.53□□□□□ -0.72
TNFRSF9-202ENST00000474475 C11orf49Q9H6J7 331 aa10.53□□□□□ -0.72
TNFRSF9-202ENST00000474475 SH2D4AQ9H788 454 aa10.53□□□□□ -0.72
TNFRSF9-202ENST00000474475 IVNS1ABPQ9Y6Y0 642 aa10.53□□□□□ -0.72
TNFRSF9-202ENST00000474475 PFASO15067 1338 aa10.53□□□□□ -0.72
TNFRSF9-202ENST00000474475 M0R2C6 588 aa10.52□□□□□ -0.73
TNFRSF9-202ENST00000474475 DPYSL4O14531 572 aa10.52□□□□□ -0.73
TNFRSF9-202ENST00000474475 SNPHO15079 494 aa10.52□□□□□ -0.73
TNFRSF9-202ENST00000474475 WDR46O15213 610 aaKnown RBP10.52□□□□□ -0.73
TNFRSF9-202ENST00000474475 FLOT1O75955 427 aa10.52□□□□□ -0.73
TNFRSF9-202ENST00000474475 IGHA2P01877 340 aa10.52□□□□□ -0.73
TNFRSF9-202ENST00000474475 COL6A1P12109 1028 aa10.52□□□□□ -0.73
TNFRSF9-202ENST00000474475 ERCC3P19447 782 aa10.52□□□□□ -0.73
TNFRSF9-202ENST00000474475 ATP2B2Q01814 1243 aa10.52□□□□□ -0.73
TNFRSF9-202ENST00000474475 C7orf61Q8IZ16 206 aa10.52□□□□□ -0.73
TNFRSF9-202ENST00000474475 STK11IPQ8N1F8 1099 aa10.52□□□□□ -0.73
TNFRSF9-202ENST00000474475 SHCBP1Q8NEM2 672 aa10.52□□□□□ -0.73
TNFRSF9-202ENST00000474475 OTUD7AQ8TE49 926 aaPredicted RBP10.52□□□□□ -0.73
TNFRSF9-202ENST00000474475 KANSL2Q9H9L4 492 aa10.52□□□□□ -0.73
TNFRSF9-202ENST00000474475 EPB41L4AQ9HCS5 686 aaPredicted RBP10.52□□□□□ -0.73
TNFRSF9-202ENST00000474475 ROBO3Q96MS0 1386 aa10.52□□□□□ -0.73
TNFRSF9-202ENST00000474475 MINDY4BA8MYZ0 360 aa10.51□□□□□ -0.73
TNFRSF9-202ENST00000474475 GPAA1O43292 621 aa10.51□□□□□ -0.73
TNFRSF9-202ENST00000474475 RASA1P20936 1047 aa10.51□□□□□ -0.73
TNFRSF9-202ENST00000474475 ADORA2AP29274 412 aa10.51□□□□□ -0.73
TNFRSF9-202ENST00000474475 CYP2C19P33261 490 aa10.51□□□□□ -0.73
TNFRSF9-202ENST00000474475 RRP1P56182 461 aaKnown RBP10.51□□□□□ -0.73
TNFRSF9-202ENST00000474475 TMEM132BQ14DG7 1078 aa10.51□□□□□ -0.73
TNFRSF9-202ENST00000474475 MFSD14CQ5VZR4 134 aa10.51□□□□□ -0.73
TNFRSF9-202ENST00000474475 GIMAP6Q6P9H5 292 aa10.51□□□□□ -0.73
TNFRSF9-202ENST00000474475 MB21D1Q8N884 522 aa10.51□□□□□ -0.73
TNFRSF9-202ENST00000474475 TRPV1Q8NER1 839 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms