RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 TRIM22Q8IYM9 498 aa20.88■□□□□ 0.93
ECHDC1-214ENST00000474289 IFNL2Q8IZJ0 200 aa20.88■□□□□ 0.93
ECHDC1-214ENST00000474289 ARL8AQ96BM9 186 aa20.88■□□□□ 0.93
ECHDC1-214ENST00000474289 LACRTQ9GZZ8 138 aa20.88■□□□□ 0.93
ECHDC1-214ENST00000474289 RCCD1A6NED2 376 aa20.87■□□□□ 0.93
ECHDC1-214ENST00000474289 IFIT3O14879 490 aaKnown RBP20.87■□□□□ 0.93
ECHDC1-214ENST00000474289 CYP27B1O15528 508 aa20.87■□□□□ 0.93
ECHDC1-214ENST00000474289 KRT86O43790 486 aa20.87■□□□□ 0.93
ECHDC1-214ENST00000474289 DDR1Q08345 913 aa20.87■□□□□ 0.93
ECHDC1-214ENST00000474289 KIAA1328Q86T90 577 aa20.87■□□□□ 0.93
ECHDC1-214ENST00000474289 RPAINQ86UA6 219 aa20.87■□□□□ 0.93
ECHDC1-214ENST00000474289 CMTR1Q8N1G2 835 aaKnown RBP20.87■□□□□ 0.93
ECHDC1-214ENST00000474289 OTUD6BQ8N6M0 293 aa20.87■□□□□ 0.93
ECHDC1-214ENST00000474289 BANK1Q8NDB2 785 aa20.87■□□□□ 0.93
ECHDC1-214ENST00000474289 RWDD2AQ9UIY3 292 aa20.87■□□□□ 0.93
ECHDC1-214ENST00000474289 FAM205CA6NFA0 338 aa20.87■□□□□ 0.93
ECHDC1-214ENST00000474289 CLGNO14967 610 aa20.87■□□□□ 0.93
ECHDC1-214ENST00000474289 MEFVO15553 781 aaPredicted RBP20.87■□□□□ 0.93
ECHDC1-214ENST00000474289 OPA1O60313 960 aa20.87■□□□□ 0.93
ECHDC1-214ENST00000474289 KIAA0754O94854 1291 aa20.87■□□□□ 0.93
ECHDC1-214ENST00000474289 RRAGBQ5VZM2 374 aa20.87■□□□□ 0.93
ECHDC1-214ENST00000474289 EP400NLQ6ZTU2 488 aa20.87■□□□□ 0.93
ECHDC1-214ENST00000474289 JADE2Q9NQC1 790 aa20.87■□□□□ 0.93
ECHDC1-214ENST00000474289 DMGDHQ9UI17 866 aaKnown RBP20.87■□□□□ 0.93
ECHDC1-214ENST00000474289 LUC7L2Q9Y383 392 aaKnown RBP20.87■□□□□ 0.93
ECHDC1-214ENST00000474289 EPB41P11171 864 aaKnown RBP20.86■□□□□ 0.93
ECHDC1-214ENST00000474289 IDEP14735 1019 aa20.86■□□□□ 0.93
ECHDC1-214ENST00000474289 ADD2P35612 726 aa20.86■□□□□ 0.93
ECHDC1-214ENST00000474289 PAK1Q13153 545 aa20.86■□□□□ 0.93
ECHDC1-214ENST00000474289 IQCEQ6IPM2 695 aa20.86■□□□□ 0.93
ECHDC1-214ENST00000474289 CCDC70Q6NSX1 233 aa20.86■□□□□ 0.93
ECHDC1-214ENST00000474289 ZNF662Q6ZS27 426 aa20.86■□□□□ 0.93
ECHDC1-214ENST00000474289 BLZF1Q9H2G9 400 aa20.86■□□□□ 0.93
ECHDC1-214ENST00000474289 ZSWIM5Q9P217 1185 aa20.86■□□□□ 0.93
ECHDC1-214ENST00000474289 TJP1Q07157 1748 aa20.86■□□□□ 0.93
ECHDC1-214ENST00000474289 ANO9A1A5B4 782 aa20.86■□□□□ 0.93
ECHDC1-214ENST00000474289 MYCNP04198 464 aaPredicted RBP20.86■□□□□ 0.93
ECHDC1-214ENST00000474289 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.86■□□□□ 0.935e-9■■■■■ 28.9
ECHDC1-214ENST00000474289 XDHP47989 1333 aa20.85■□□□□ 0.93
ECHDC1-214ENST00000474289 TRIM75PA6NK02 468 aa20.85■□□□□ 0.93
ECHDC1-214ENST00000474289 KRT83P78385 493 aa20.85■□□□□ 0.93
ECHDC1-214ENST00000474289 TSEN2Q8NCE0 465 aaKnown RBP20.85■□□□□ 0.93
ECHDC1-214ENST00000474289 LRRC1Q9BTT6 524 aa20.85■□□□□ 0.93
ECHDC1-214ENST00000474289 VPS54Q9P1Q0 977 aa20.85■□□□□ 0.93
ECHDC1-214ENST00000474289 DUSP10Q9Y6W6 482 aa20.85■□□□□ 0.93
ECHDC1-214ENST00000474289 DEXIO95424 95 aa20.85■□□□□ 0.93
ECHDC1-214ENST00000474289 KRT28Q7Z3Y7 464 aa20.85■□□□□ 0.93
ECHDC1-214ENST00000474289 NELFBQ8WX92 580 aa20.85■□□□□ 0.93
ECHDC1-214ENST00000474289 ZBTB3Q9H5J0 574 aa20.85■□□□□ 0.93
ECHDC1-214ENST00000474289 PPARAQ07869 468 aa20.84■□□□□ 0.93
ECHDC1-214ENST00000474289 SF3B2Q13435 895 aaKnown RBP20.84■□□□□ 0.93
ECHDC1-214ENST00000474289 RTN1Q16799 776 aa20.84■□□□□ 0.93
ECHDC1-214ENST00000474289 MMGT1Q8N4V1 131 aa20.84■□□□□ 0.93
ECHDC1-214ENST00000474289 DCAF5Q96JK2 942 aa20.84■□□□□ 0.93
ECHDC1-214ENST00000474289 CD248Q9HCU0 757 aa20.84■□□□□ 0.93
ECHDC1-214ENST00000474289 NID2Q14112 1375 aa20.84■□□□□ 0.93
ECHDC1-214ENST00000474289 ABCC12Q96J65 1359 aa20.84■□□□□ 0.93
ECHDC1-214ENST00000474289 A6NNZ2 444 aa20.84■□□□□ 0.93
ECHDC1-214ENST00000474289 MCAMP43121 646 aa20.84■□□□□ 0.93
ECHDC1-214ENST00000474289 MRPS25P82663 173 aaKnown RBP20.84■□□□□ 0.93
ECHDC1-214ENST00000474289 TUBB8Q3ZCM7 444 aa20.84■□□□□ 0.93
ECHDC1-214ENST00000474289 CREG2Q8IUH2 290 aa20.84■□□□□ 0.93
ECHDC1-214ENST00000474289 SH2D3CQ8N5H7 860 aa20.84■□□□□ 0.93
ECHDC1-214ENST00000474289 PKD1L3Q7Z443 1732 aa20.83■□□□□ 0.93
ECHDC1-214ENST00000474289 CABP4P57796 275 aa20.83■□□□□ 0.93
ECHDC1-214ENST00000474289 TSR1Q2NL82 804 aaKnown RBP20.83■□□□□ 0.93
ECHDC1-214ENST00000474289 SPATS2Q86XZ4 545 aaKnown RBP20.83■□□□□ 0.93
ECHDC1-214ENST00000474289 CRACR2BQ8N4Y2 399 aaPredicted RBP20.83■□□□□ 0.93
ECHDC1-214ENST00000474289 MB21D1Q8N884 522 aa20.83■□□□□ 0.93
ECHDC1-214ENST00000474289 STAG1Q8WVM7 1258 aa20.83■□□□□ 0.93
ECHDC1-214ENST00000474289 CCDC85AQ96PX6 553 aaPredicted RBP20.83■□□□□ 0.93
ECHDC1-214ENST00000474289 RUFY1Q96T51 708 aa20.83■□□□□ 0.93
ECHDC1-214ENST00000474289 CAPN11Q9UMQ6 739 aa20.83■□□□□ 0.93
ECHDC1-214ENST00000474289 ATRNO75882 1429 aa20.83■□□□□ 0.93
ECHDC1-214ENST00000474289 MYH13Q9UKX3 1938 aa20.83■□□□□ 0.92
ECHDC1-214ENST00000474289 MACROD2A1Z1Q3 448 aa20.83■□□□□ 0.92
ECHDC1-214ENST00000474289 ATP1A2P50993 1020 aa20.83■□□□□ 0.92
ECHDC1-214ENST00000474289 EARS2Q5JPH6 523 aaKnown RBP20.83■□□□□ 0.92
ECHDC1-214ENST00000474289 ZKSCAN4Q969J2 545 aaPredicted RBP20.83■□□□□ 0.92
ECHDC1-214ENST00000474289 LRP6O75581 1613 aa20.82■□□□□ 0.92
ECHDC1-214ENST00000474289 KIF1AQ12756 1690 aa20.82■□□□□ 0.92
ECHDC1-214ENST00000474289 WNT7AO00755 349 aa20.82■□□□□ 0.92
ECHDC1-214ENST00000474289 EPHB4P54760 987 aa20.82■□□□□ 0.92
ECHDC1-214ENST00000474289 SLC7A5Q01650 507 aa20.82■□□□□ 0.92
ECHDC1-214ENST00000474289 MEA1Q16626 185 aa20.82■□□□□ 0.92
ECHDC1-214ENST00000474289 ALS2CLQ60I27 953 aa20.82■□□□□ 0.92
ECHDC1-214ENST00000474289 IRF2BP1Q8IU81 584 aa20.82■□□□□ 0.92
ECHDC1-214ENST00000474289 PURBQ96QR8 312 aaKnown RBP20.82■□□□□ 0.92
ECHDC1-214ENST00000474289 MAPK8IP1Q9UQF2 711 aa20.82■□□□□ 0.92
ECHDC1-214ENST00000474289 TACC3Q9Y6A5 838 aa20.82■□□□□ 0.92
ECHDC1-214ENST00000474289 AKAP11Q9UKA4 1901 aa20.82■□□□□ 0.92
ECHDC1-214ENST00000474289 GLI3P10071 1580 aa20.82■□□□□ 0.92
ECHDC1-214ENST00000474289 C21orf2O43822 256 aa20.82■□□□□ 0.92
ECHDC1-214ENST00000474289 ZEB2O60315 1214 aa20.82■□□□□ 0.92
ECHDC1-214ENST00000474289 KCTD16Q68DU8 428 aa20.82■□□□□ 0.92
ECHDC1-214ENST00000474289 FNBP4Q8N3X1 1017 aaPredicted RBP20.82■□□□□ 0.92
ECHDC1-214ENST00000474289 RUBCNQ92622 972 aa20.82■□□□□ 0.92
ECHDC1-214ENST00000474289 SHISA4Q96DD7 197 aa20.82■□□□□ 0.92
ECHDC1-214ENST00000474289 TACO1Q9BSH4 297 aaKnown RBP20.82■□□□□ 0.92
ECHDC1-214ENST00000474289 POLD4Q9HCU8 107 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms