RNA–Protein interactions for RNA: ENST00000474283.1

LDLRAP1-204, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 3

Gene LDLRAP1, Length 913 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-204ENST00000474283 NID2Q14112 1375 aa15.9■□□□□ 0.14
LDLRAP1-204ENST00000474283 GOLGA8AA7E2F4 631 aa15.9■□□□□ 0.14
LDLRAP1-204ENST00000474283 USP17L10C9JJH3 530 aa15.9■□□□□ 0.14
LDLRAP1-204ENST00000474283 DDAH1O94760 285 aa15.9■□□□□ 0.14
LDLRAP1-204ENST00000474283 BRD1O95696 1058 aa15.9■□□□□ 0.14
LDLRAP1-204ENST00000474283 ZSCAN22P10073 491 aaPredicted RBP15.9■□□□□ 0.14
LDLRAP1-204ENST00000474283 XBP1P17861 261 aa15.9■□□□□ 0.14
LDLRAP1-204ENST00000474283 NOVP48745 357 aa15.9■□□□□ 0.14
LDLRAP1-204ENST00000474283 AKAP17AQ02040 695 aaKnown RBP15.9■□□□□ 0.14
LDLRAP1-204ENST00000474283 PPIL2Q13356 520 aa15.9■□□□□ 0.14
LDLRAP1-204ENST00000474283 TRIM29Q14134 588 aa15.9■□□□□ 0.14
LDLRAP1-204ENST00000474283 RGMBQ6NW40 437 aa15.9■□□□□ 0.14
LDLRAP1-204ENST00000474283 ZNF654Q8IZM8 581 aa15.9■□□□□ 0.14
LDLRAP1-204ENST00000474283 NECAB1Q8N987 351 aa15.9■□□□□ 0.14
LDLRAP1-204ENST00000474283 NUP133Q8WUM0 1156 aa15.9■□□□□ 0.14
LDLRAP1-204ENST00000474283 MKL1Q969V6 931 aa15.9■□□□□ 0.14
LDLRAP1-204ENST00000474283 MYL10Q9BUA6 226 aa15.9■□□□□ 0.14
LDLRAP1-204ENST00000474283 GOPCQ9HD26 462 aa15.9■□□□□ 0.14
LDLRAP1-204ENST00000474283 BRPF3Q9ULD4 1205 aa15.9■□□□□ 0.14
LDLRAP1-204ENST00000474283 TMX2Q9Y320 296 aa15.9■□□□□ 0.14
LDLRAP1-204ENST00000474283 IRF6O14896 467 aa15.89■□□□□ 0.13
LDLRAP1-204ENST00000474283 SYT1P21579 422 aa15.89■□□□□ 0.13
LDLRAP1-204ENST00000474283 MCM4P33991 863 aa15.89■□□□□ 0.13
LDLRAP1-204ENST00000474283 GJA5P36382 358 aa15.89■□□□□ 0.13
LDLRAP1-204ENST00000474283 GRM1Q13255 1194 aa15.89■□□□□ 0.13
LDLRAP1-204ENST00000474283 MICU3Q86XE3 530 aa15.89■□□□□ 0.13
LDLRAP1-204ENST00000474283 CTCFLQ8NI51 663 aaPredicted RBP15.89■□□□□ 0.13
LDLRAP1-204ENST00000474283 ZSCAN16Q9H4T2 348 aaPredicted RBP15.89■□□□□ 0.13
LDLRAP1-204ENST00000474283 CREBZFQ9NS37 354 aa15.89■□□□□ 0.13
LDLRAP1-204ENST00000474283 PTPDC1A2A3K4 754 aa15.88■□□□□ 0.13
LDLRAP1-204ENST00000474283 VPS37CA5D8V6 355 aaPredicted RBP15.88■□□□□ 0.13
LDLRAP1-204ENST00000474283 F5H6K3 240 aa15.88■□□□□ 0.13
LDLRAP1-204ENST00000474283 LARGE1O95461 756 aa15.88■□□□□ 0.13
LDLRAP1-204ENST00000474283 RXRAP19793 462 aa15.88■□□□□ 0.13
LDLRAP1-204ENST00000474283 GNAQP50148 359 aa15.88■□□□□ 0.13
LDLRAP1-204ENST00000474283 USP14P54578 494 aa15.88■□□□□ 0.13
LDLRAP1-204ENST00000474283 HMGCS2P54868 508 aa15.88■□□□□ 0.13
LDLRAP1-204ENST00000474283 BACE1P56817 501 aa15.88■□□□□ 0.13
LDLRAP1-204ENST00000474283 KLRC3Q07444 240 aa15.88■□□□□ 0.13
LDLRAP1-204ENST00000474283 SCRN1Q12765 414 aa15.88■□□□□ 0.13
LDLRAP1-204ENST00000474283 DGKZQ13574 1117 aa15.88■□□□□ 0.13
LDLRAP1-204ENST00000474283 NBR1Q14596 966 aa15.88■□□□□ 0.13
LDLRAP1-204ENST00000474283 RTN1Q16799 776 aa15.88■□□□□ 0.13
LDLRAP1-204ENST00000474283 CCDC96Q2M329 555 aa15.88■□□□□ 0.13
LDLRAP1-204ENST00000474283 SLFN13Q68D06 897 aa15.88■□□□□ 0.13
LDLRAP1-204ENST00000474283 USP17L2Q6R6M4 530 aa15.88■□□□□ 0.13
LDLRAP1-204ENST00000474283 GADL1Q6ZQY3 521 aa15.88■□□□□ 0.13
LDLRAP1-204ENST00000474283 RASAL3Q86YV0 1011 aa15.88■□□□□ 0.13
LDLRAP1-204ENST00000474283 CCDC144CPQ8IYA2 1237 aa15.88■□□□□ 0.13
LDLRAP1-204ENST00000474283 SPICE1Q8N0Z3 855 aa15.88■□□□□ 0.13
LDLRAP1-204ENST00000474283 SMARCC2Q8TAQ2 1214 aa15.88■□□□□ 0.13
LDLRAP1-204ENST00000474283 MAP3K14Q99558 947 aa15.88■□□□□ 0.13
LDLRAP1-204ENST00000474283 KIAA1683Q9H0B3 1180 aa15.88■□□□□ 0.13
LDLRAP1-204ENST00000474283 VCPKMTQ9H867 229 aa15.88■□□□□ 0.13
LDLRAP1-204ENST00000474283 TMOD4Q9NZQ9 345 aa15.88■□□□□ 0.13
LDLRAP1-204ENST00000474283 STK36Q9NRP7 1315 aa15.88■□□□□ 0.13
LDLRAP1-204ENST00000474283 RLFQ13129 1914 aa15.88■□□□□ 0.13
LDLRAP1-204ENST00000474283 C19orf81C9J6K1 198 aa15.87■□□□□ 0.13
LDLRAP1-204ENST00000474283 CXCL11O14625 94 aa15.87■□□□□ 0.13
LDLRAP1-204ENST00000474283 NDUFB10O96000 172 aa15.87■□□□□ 0.13
LDLRAP1-204ENST00000474283 SPRYD7Q5W111 196 aa15.87■□□□□ 0.13
LDLRAP1-204ENST00000474283 RASGRP2Q7LDG7 609 aa15.87■□□□□ 0.13
LDLRAP1-204ENST00000474283 DNAJC5GQ8N7S2 189 aa15.87■□□□□ 0.13
LDLRAP1-204ENST00000474283 GMCL1P1Q8NEA9 526 aa15.87■□□□□ 0.13
LDLRAP1-204ENST00000474283 ZBTB48P10074 688 aaPredicted RBP15.86■□□□□ 0.13
LDLRAP1-204ENST00000474283 CCT2P78371 535 aaKnown RBP15.86■□□□□ 0.13
LDLRAP1-204ENST00000474283 SNAPC2Q13487 334 aa15.86■□□□□ 0.13
LDLRAP1-204ENST00000474283 KIAA1755Q5JYT7 1200 aa15.86■□□□□ 0.13
LDLRAP1-204ENST00000474283 ATL3Q6DD88 541 aa15.86■□□□□ 0.13
LDLRAP1-204ENST00000474283 NSUN7Q8NE18 718 aaKnown RBP15.86■□□□□ 0.13
LDLRAP1-204ENST00000474283 NUP88Q99567 741 aaPredicted RBP15.86■□□□□ 0.13
LDLRAP1-204ENST00000474283 EMILIN3Q9NT22 766 aa15.86■□□□□ 0.13
LDLRAP1-204ENST00000474283 SYNPO2Q9UMS6 1093 aa15.86■□□□□ 0.13
LDLRAP1-204ENST00000474283 KCNH4Q9UQ05 1017 aa15.86■□□□□ 0.13
LDLRAP1-204ENST00000474283 FRMPD2Q68DX3 1309 aaPredicted RBP15.86■□□□□ 0.13
LDLRAP1-204ENST00000474283 SMCHD1A6NHR9 2005 aa15.85■□□□□ 0.13
LDLRAP1-204ENST00000474283 A0A0G2JLL6 359 aaPredicted RBP15.85■□□□□ 0.13
LDLRAP1-204ENST00000474283 BAG4O95429 457 aaKnown RBP15.85■□□□□ 0.13
LDLRAP1-204ENST00000474283 F13A1P00488 732 aa15.85■□□□□ 0.13
LDLRAP1-204ENST00000474283 SLC10A3P09131 477 aa15.85■□□□□ 0.13
LDLRAP1-204ENST00000474283 PARP1P09874 1014 aaKnown RBP15.85■□□□□ 0.13
LDLRAP1-204ENST00000474283 PDHBP11177 359 aa15.85■□□□□ 0.13
LDLRAP1-204ENST00000474283 SLC1A4P43007 532 aa15.85■□□□□ 0.13
LDLRAP1-204ENST00000474283 GTF2A2P52657 109 aa15.85■□□□□ 0.13
LDLRAP1-204ENST00000474283 HTRA3P83110 453 aa15.85■□□□□ 0.13
LDLRAP1-204ENST00000474283 SSRP1Q08945 709 aaKnown RBP15.85■□□□□ 0.13
LDLRAP1-204ENST00000474283 TROAPQ12815 778 aa15.85■□□□□ 0.13
LDLRAP1-204ENST00000474283 DEFB115Q30KQ5 88 aa15.85■□□□□ 0.13
LDLRAP1-204ENST00000474283 FAM83BQ5T0W9 1011 aa15.85■□□□□ 0.13
LDLRAP1-204ENST00000474283 CYP4F22Q6NT55 531 aa15.85■□□□□ 0.13
LDLRAP1-204ENST00000474283 PRRT2Q7Z6L0 340 aaPredicted RBP15.85■□□□□ 0.13
LDLRAP1-204ENST00000474283 DCAF4Q8WV16 495 aa15.85■□□□□ 0.13
LDLRAP1-204ENST00000474283 LPAR1Q92633 364 aa15.85■□□□□ 0.13
LDLRAP1-204ENST00000474283 CCDC102AQ96A19 550 aa15.85■□□□□ 0.13
LDLRAP1-204ENST00000474283 HHIPL1Q96JK4 782 aa15.85■□□□□ 0.13
LDLRAP1-204ENST00000474283 LZTS2Q9BRK4 669 aa15.85■□□□□ 0.13
LDLRAP1-204ENST00000474283 GPCPD1Q9NPB8 672 aa15.85■□□□□ 0.13
LDLRAP1-204ENST00000474283 ORC3Q9UBD5 711 aaPredicted RBP15.85■□□□□ 0.13
LDLRAP1-204ENST00000474283 MBD3O95983 291 aa15.84■□□□□ 0.13
LDLRAP1-204ENST00000474283 GOLGA8HP0CJ92 632 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms