RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 EAF1Q96JC9 268 aaPredicted RBP5.31□□□□□ -1.56
ECHDC1-213ENST00000474240 PCDHB14Q9Y5E9 798 aa5.31□□□□□ -1.56
ECHDC1-213ENST00000474240 DNAJC25-GNG10A0A024R161 153 aa5.3□□□□□ -1.56
ECHDC1-213ENST00000474240 MEIS3P2A8K0S8 358 aa5.3□□□□□ -1.56
ECHDC1-213ENST00000474240 TLR3O15455 904 aaKnown RBP5.3□□□□□ -1.56
ECHDC1-213ENST00000474240 CRKP46108 304 aa5.3□□□□□ -1.56
ECHDC1-213ENST00000474240 SOX9P48436 509 aa5.3□□□□□ -1.56
ECHDC1-213ENST00000474240 CDK8P49336 464 aa5.3□□□□□ -1.56
ECHDC1-213ENST00000474240 HK2P52789 917 aa5.3□□□□□ -1.56
ECHDC1-213ENST00000474240 DLG4P78352 724 aa5.3□□□□□ -1.56
ECHDC1-213ENST00000474240 SLBPQ14493 270 aaKnown RBP eCLIP5.3□□□□□ -1.56
ECHDC1-213ENST00000474240 MARCH10Q8NA82 808 aaPredicted RBP5.3□□□□□ -1.56
ECHDC1-213ENST00000474240 FAM13CQ8NE31 585 aa5.3□□□□□ -1.56
ECHDC1-213ENST00000474240 CYB5D2Q8WUJ1 264 aa5.3□□□□□ -1.56
ECHDC1-213ENST00000474240 MYLIPQ8WY64 445 aa5.3□□□□□ -1.56
ECHDC1-213ENST00000474240 C8orf37Q96NL8 207 aa5.3□□□□□ -1.56
ECHDC1-213ENST00000474240 FERD3LQ96RJ6 166 aa5.3□□□□□ -1.56
ECHDC1-213ENST00000474240 MCOLN1Q9GZU1 580 aa5.3□□□□□ -1.56
ECHDC1-213ENST00000474240 RNF32Q9H0A6 362 aa5.3□□□□□ -1.56
ECHDC1-213ENST00000474240 BRMS1Q9HCU9 246 aa5.3□□□□□ -1.56
ECHDC1-213ENST00000474240 REV1Q9UBZ9 1251 aa5.3□□□□□ -1.56
ECHDC1-213ENST00000474240 TJP2Q9UDY2 1190 aa5.3□□□□□ -1.56
ECHDC1-213ENST00000474240 ZNRF3Q9ULT6 936 aa5.3□□□□□ -1.56
ECHDC1-213ENST00000474240 POLR3KQ9Y2Y1 108 aaPredicted RBP5.3□□□□□ -1.56
ECHDC1-213ENST00000474240 TRHRP34981 398 aaPredicted RBP5.29□□□□□ -1.56
ECHDC1-213ENST00000474240 CHMP4BP1P59074 171 aa5.29□□□□□ -1.56
ECHDC1-213ENST00000474240 TCERG1LQ5VWI1 586 aa5.29□□□□□ -1.56
ECHDC1-213ENST00000474240 PRAMEF13Q5VWM6 474 aa5.29□□□□□ -1.56
ECHDC1-213ENST00000474240 C9orf131Q5VYM1 1079 aa5.29□□□□□ -1.56
ECHDC1-213ENST00000474240 C22orf34Q6ZV56 151 aa5.29□□□□□ -1.56
ECHDC1-213ENST00000474240 SLC43A3Q8NBI5 491 aa5.29□□□□□ -1.56
ECHDC1-213ENST00000474240 FBXO27Q8NI29 283 aa5.29□□□□□ -1.56
ECHDC1-213ENST00000474240 CXorf38Q8TB03 319 aa5.29□□□□□ -1.56
ECHDC1-213ENST00000474240 BAHD1Q8TBE0 780 aaPredicted RBP5.29□□□□□ -1.56
ECHDC1-213ENST00000474240 ACSF2Q96CM8 615 aaPredicted RBP5.29□□□□□ -1.56
ECHDC1-213ENST00000474240 FBRSQ9HAH7 460 aa5.29□□□□□ -1.56
ECHDC1-213ENST00000474240 CNOT6Q9ULM6 557 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-213ENST00000474240 TPX2Q9ULW0 747 aaKnown RBP5.29□□□□□ -1.56
ECHDC1-213ENST00000474240 GRIN3BO60391 1043 aa5.28□□□□□ -1.56
ECHDC1-213ENST00000474240 PSPNO60542 156 aa5.28□□□□□ -1.56
ECHDC1-213ENST00000474240 ADRB1P08588 477 aa5.28□□□□□ -1.56
ECHDC1-213ENST00000474240 KIR3DL1P43629 444 aa5.28□□□□□ -1.56
ECHDC1-213ENST00000474240 CDCP2Q5VXM1 449 aa5.28□□□□□ -1.56
ECHDC1-213ENST00000474240 LETMD1Q6P1Q0 360 aa5.28□□□□□ -1.56
ECHDC1-213ENST00000474240 GK5Q6ZS86 529 aa5.28□□□□□ -1.56
ECHDC1-213ENST00000474240 TAB3Q8N5C8 712 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-213ENST00000474240 RBBP8NLQ8NC74 664 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-213ENST00000474240 BORCS6Q96GS4 357 aa5.28□□□□□ -1.56
ECHDC1-213ENST00000474240 CCDC74BQ96LY2 380 aa5.28□□□□□ -1.56
ECHDC1-213ENST00000474240 CRBNQ96SW2 442 aa5.28□□□□□ -1.56
ECHDC1-213ENST00000474240 MIPEPQ99797 713 aa5.28□□□□□ -1.56
ECHDC1-213ENST00000474240 ACBD3Q9H3P7 528 aa5.28□□□□□ -1.56
ECHDC1-213ENST00000474240 TMEM59LQ9UK28 342 aa5.28□□□□□ -1.56
ECHDC1-213ENST00000474240 ST14Q9Y5Y6 855 aa5.28□□□□□ -1.56
ECHDC1-213ENST00000474240 SLC12A7Q9Y666 1083 aa5.28□□□□□ -1.56
ECHDC1-213ENST00000474240 ADAMTS20P59510 1910 aa5.27□□□□□ -1.57
ECHDC1-213ENST00000474240 RBAK-RBAKDNI3L0D1 243 aa5.27□□□□□ -1.57
ECHDC1-213ENST00000474240 CELA3BP08861 270 aa5.27□□□□□ -1.57
ECHDC1-213ENST00000474240 RAG1P15918 1043 aa5.27□□□□□ -1.57
ECHDC1-213ENST00000474240 RNF4P78317 190 aa5.27□□□□□ -1.57
ECHDC1-213ENST00000474240 NKG7Q16617 165 aa5.27□□□□□ -1.57
ECHDC1-213ENST00000474240 SFRP5Q5T4F7 317 aa5.27□□□□□ -1.57
ECHDC1-213ENST00000474240 ZNF605Q86T29 641 aa5.27□□□□□ -1.57
ECHDC1-213ENST00000474240 PHACTR4Q8IZ21 702 aa5.27□□□□□ -1.57
ECHDC1-213ENST00000474240 TM9SF2Q99805 663 aa5.27□□□□□ -1.57
ECHDC1-213ENST00000474240 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.27□□□□□ -1.57
ECHDC1-213ENST00000474240 XYLT2Q9H1B5 865 aa5.27□□□□□ -1.57
ECHDC1-213ENST00000474240 KLHL3Q9UH77 587 aa5.27□□□□□ -1.57
ECHDC1-213ENST00000474240 EFR3BQ9Y2G0 817 aa5.27□□□□□ -1.57
ECHDC1-213ENST00000474240 CORINQ9Y5Q5 1042 aa5.27□□□□□ -1.57
ECHDC1-213ENST00000474240 CAPN6Q9Y6Q1 641 aa5.27□□□□□ -1.57
ECHDC1-213ENST00000474240 MYOCOSA0A1B0GUC4 107 aa5.26□□□□□ -1.57
ECHDC1-213ENST00000474240 OTOL1A6NHN0 477 aaPredicted RBP5.26□□□□□ -1.57
ECHDC1-213ENST00000474240 SLITRK5O94991 958 aa5.26□□□□□ -1.57
ECHDC1-213ENST00000474240 HPXP02790 462 aa5.26□□□□□ -1.57
ECHDC1-213ENST00000474240 ARID5AQ03989 594 aa5.26□□□□□ -1.57
ECHDC1-213ENST00000474240 INTS3Q68E01 1043 aaKnown RBP5.26□□□□□ -1.57
ECHDC1-213ENST00000474240 NLRC3Q7RTR2 1065 aa5.26□□□□□ -1.57
ECHDC1-213ENST00000474240 C19orf47Q8N9M1 422 aaKnown RBP5.26□□□□□ -1.57
ECHDC1-213ENST00000474240 CPLX3Q8WVH0 158 aa5.26□□□□□ -1.57
ECHDC1-213ENST00000474240 UBE2FQ969M7 185 aa5.26□□□□□ -1.57
ECHDC1-213ENST00000474240 TINF2Q9BSI4 451 aa5.26□□□□□ -1.57
ECHDC1-213ENST00000474240 ASPNQ9BXN1 380 aa5.26□□□□□ -1.57
ECHDC1-213ENST00000474240 SRRTQ9BXP5 876 aaKnown RBP5.26□□□□□ -1.57
ECHDC1-213ENST00000474240 CNNM2Q9H8M5 875 aa5.26□□□□□ -1.57
ECHDC1-213ENST00000474240 ZSWIM5Q9P217 1185 aa5.26□□□□□ -1.57
ECHDC1-213ENST00000474240 CEP131Q9UPN4 1083 aa5.26□□□□□ -1.57
ECHDC1-213ENST00000474240 KCTD3Q9Y597 815 aa5.26□□□□□ -1.57
ECHDC1-213ENST00000474240 SLC22A31A6NKX4 558 aa5.25□□□□□ -1.57
ECHDC1-213ENST00000474240 TNFRSF10CO14798 259 aa5.25□□□□□ -1.57
ECHDC1-213ENST00000474240 RGS13O14921 159 aa5.25□□□□□ -1.57
ECHDC1-213ENST00000474240 SEMA7AO75326 666 aa5.25□□□□□ -1.57
ECHDC1-213ENST00000474240 ATF4P18848 351 aaPredicted RBP5.25□□□□□ -1.57
ECHDC1-213ENST00000474240 GBP1P32455 592 aa5.25□□□□□ -1.57
ECHDC1-213ENST00000474240 TNNI2P48788 182 aa5.25□□□□□ -1.57
ECHDC1-213ENST00000474240 EIF6P56537 245 aaKnown RBP5.25□□□□□ -1.57
ECHDC1-213ENST00000474240 CLCQ05315 142 aa5.25□□□□□ -1.57
ECHDC1-213ENST00000474240 SSPNQ14714 243 aa5.25□□□□□ -1.57
ECHDC1-213ENST00000474240 OVOS1Q6IE37 1185 aa5.25□□□□□ -1.57
ECHDC1-213ENST00000474240 THAP5Q7Z6K1 395 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms