RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 KLRC3Q07444 240 aa24.28■■□□□ 1.48
SNX13-206ENST00000474067 GRB14Q14449 540 aa24.28■■□□□ 1.48
SNX13-206ENST00000474067 DPP9Q86TI2 863 aa24.28■■□□□ 1.48
SNX13-206ENST00000474067 GMCL1P1Q8NEA9 526 aa24.28■■□□□ 1.48
SNX13-206ENST00000474067 TRIB2Q92519 343 aa24.28■■□□□ 1.48
SNX13-206ENST00000474067 USP6NLQ92738 828 aa24.28■■□□□ 1.48
SNX13-206ENST00000474067 DEFB118Q96PH6 123 aa24.28■■□□□ 1.48
SNX13-206ENST00000474067 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.28■■□□□ 1.48
SNX13-206ENST00000474067 MOV10L1Q9BXT6 1211 aaKnown RBP24.28■■□□□ 1.48
SNX13-206ENST00000474067 PPP1R9AQ9ULJ8 1098 aa24.28■■□□□ 1.48
SNX13-206ENST00000474067 A0A0G2JMZ2 1700 aa24.27■■□□□ 1.48
SNX13-206ENST00000474067 IGKV6D-41A0A0C4DH26 115 aa24.27■■□□□ 1.48
SNX13-206ENST00000474067 FARP2O94887 1054 aaPredicted RBP24.27■■□□□ 1.48
SNX13-206ENST00000474067 HOXC6P09630 235 aa24.27■■□□□ 1.48
SNX13-206ENST00000474067 SDSP20132 328 aa24.27■■□□□ 1.48
SNX13-206ENST00000474067 FAM83BQ5T0W9 1011 aa24.27■■□□□ 1.48
SNX13-206ENST00000474067 CCDC129Q6ZRS4 1044 aa24.27■■□□□ 1.48
SNX13-206ENST00000474067 PRPF38AQ8NAV1 312 aaKnown RBP24.27■■□□□ 1.48
SNX13-206ENST00000474067 ATG4CQ96DT6 458 aa24.27■■□□□ 1.48
SNX13-206ENST00000474067 CEP95Q96GE4 821 aa24.27■■□□□ 1.48
SNX13-206ENST00000474067 SLF1Q9BQI6 1058 aa24.27■■□□□ 1.48
SNX13-206ENST00000474067 MSCO60682 206 aa24.26■■□□□ 1.47
SNX13-206ENST00000474067 FCER1AP12319 257 aa24.26■■□□□ 1.47
SNX13-206ENST00000474067 NMIQ13287 307 aaPredicted RBP24.26■■□□□ 1.47
SNX13-206ENST00000474067 SAMD1Q6SPF0 538 aaPredicted RBP24.26■■□□□ 1.47
SNX13-206ENST00000474067 NCAPG2Q86XI2 1143 aa24.26■■□□□ 1.47
SNX13-206ENST00000474067 FAM227BQ96M60 508 aa24.26■■□□□ 1.47
SNX13-206ENST00000474067 RNF41Q9H4P4 317 aaPredicted RBP24.26■■□□□ 1.47
SNX13-206ENST00000474067 FEM1BQ9UK73 627 aa24.26■■□□□ 1.47
SNX13-206ENST00000474067 ADAMTS5Q9UNA0 930 aa24.26■■□□□ 1.47
SNX13-206ENST00000474067 PDE4DIPQ5VU43 2346 aa24.26■■□□□ 1.47
SNX13-206ENST00000474067 A0A0D9SFI3 127 aa24.25■■□□□ 1.47
SNX13-206ENST00000474067 PRKAR2AP13861 404 aaKnown RBP24.25■■□□□ 1.47
SNX13-206ENST00000474067 ERCC3P19447 782 aa24.25■■□□□ 1.47
SNX13-206ENST00000474067 KIAA1755Q5JYT7 1200 aa24.25■■□□□ 1.47
SNX13-206ENST00000474067 MAP3K21Q5TCX8 1036 aa24.25■■□□□ 1.47
SNX13-206ENST00000474067 SHISA4Q96DD7 197 aa24.25■■□□□ 1.47
SNX13-206ENST00000474067 PLXNB2O15031 1838 aa24.25■■□□□ 1.47
SNX13-206ENST00000474067 ZNF236Q9UL36 1845 aa24.24■■□□□ 1.47
SNX13-206ENST00000474067 VWA5AO00534 786 aa24.24■■□□□ 1.47
SNX13-206ENST00000474067 ORC4O43929 436 aa24.24■■□□□ 1.47
SNX13-206ENST00000474067 PEX10O60683 326 aa24.24■■□□□ 1.47
SNX13-206ENST00000474067 ZBED4O75132 1171 aa24.24■■□□□ 1.47
SNX13-206ENST00000474067 NDUFB10O96000 172 aa24.24■■□□□ 1.47
SNX13-206ENST00000474067 HSPD1P10809 573 aaKnown RBP24.24■■□□□ 1.47
SNX13-206ENST00000474067 POTEEQ6S8J3 1075 aa24.24■■□□□ 1.47
SNX13-206ENST00000474067 CRISPLD2Q9H0B8 497 aa24.24■■□□□ 1.47
SNX13-206ENST00000474067 TOMM22Q9NS69 142 aa24.24■■□□□ 1.47
SNX13-206ENST00000474067 STX8Q9UNK0 236 aa24.24■■□□□ 1.47
SNX13-206ENST00000474067 MYH4Q9Y623 1939 aa24.23■■□□□ 1.47
SNX13-206ENST00000474067 RANBP6O60518 1105 aaKnown RBP24.23■■□□□ 1.47
SNX13-206ENST00000474067 FGAP02671 866 aa24.23■■□□□ 1.47
SNX13-206ENST00000474067 STAT3P40763 770 aa24.23■■□□□ 1.47
SNX13-206ENST00000474067 KCTD2Q14681 263 aa24.23■■□□□ 1.47
SNX13-206ENST00000474067 RIOX2Q8IUF8 465 aa24.23■■□□□ 1.47
SNX13-206ENST00000474067 TEX13BQ9BXU2 312 aa24.23■■□□□ 1.47
SNX13-206ENST00000474067 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.23■■□□□ 1.47
SNX13-206ENST00000474067 BMP3P12645 472 aa24.22■■□□□ 1.47
SNX13-206ENST00000474067 ADORA2AP29274 412 aa24.22■■□□□ 1.47
SNX13-206ENST00000474067 OLFML2BQ68BL8 750 aa24.22■■□□□ 1.47
SNX13-206ENST00000474067 NECAB2Q7Z6G3 386 aa24.22■■□□□ 1.47
SNX13-206ENST00000474067 FAM160B2Q86V87 743 aa24.22■■□□□ 1.47
SNX13-206ENST00000474067 CHURC1Q8WUH1 139 aa24.22■■□□□ 1.47
SNX13-206ENST00000474067 ISY1Q9ULR0 285 aaKnown RBP24.22■■□□□ 1.47
SNX13-206ENST00000474067 NR2E3Q9Y5X4 410 aa24.22■■□□□ 1.47
SNX13-206ENST00000474067 RLFQ13129 1914 aa24.22■■□□□ 1.47
SNX13-206ENST00000474067 SLC1A4P43007 532 aa24.21■■□□□ 1.47
SNX13-206ENST00000474067 OAZ1P54368 228 aa24.21■■□□□ 1.47
SNX13-206ENST00000474067 CTDSPL2Q05D32 466 aa24.21■■□□□ 1.47
SNX13-206ENST00000474067 TMEM132BQ14DG7 1078 aa24.21■■□□□ 1.47
SNX13-206ENST00000474067 FAM47AQ5JRC9 791 aa24.21■■□□□ 1.47
SNX13-206ENST00000474067 VPS53Q5VIR6 699 aa24.21■■□□□ 1.47
SNX13-206ENST00000474067 SLFN13Q68D06 897 aa24.21■■□□□ 1.47
SNX13-206ENST00000474067 MFSD6Q6ZSS7 791 aa24.21■■□□□ 1.47
SNX13-206ENST00000474067 RUFY2Q8WXA3 655 aa24.21■■□□□ 1.47
SNX13-206ENST00000474067 DPF3Q92784 378 aa24.21■■□□□ 1.47
SNX13-206ENST00000474067 GMCL1Q96IK5 515 aa24.21■■□□□ 1.47
SNX13-206ENST00000474067 CTNNA3Q9UI47 895 aa24.21■■□□□ 1.47
SNX13-206ENST00000474067 PARP14Q460N5 1801 aa24.21■■□□□ 1.47
SNX13-206ENST00000474067 ZNF213O14771 459 aa24.2■■□□□ 1.46
SNX13-206ENST00000474067 FGRP09769 529 aa24.2■■□□□ 1.46
SNX13-206ENST00000474067 STAT2P52630 851 aa24.2■■□□□ 1.46
SNX13-206ENST00000474067 CACNB2Q08289 660 aaPredicted RBP24.2■■□□□ 1.46
SNX13-206ENST00000474067 CCDC178Q5BJE1 867 aa24.2■■□□□ 1.46
SNX13-206ENST00000474067 CWC27Q6UX04 472 aaKnown RBP24.2■■□□□ 1.46
SNX13-206ENST00000474067 LRRC47Q8N1G4 583 aaKnown RBP24.2■■□□□ 1.46
SNX13-206ENST00000474067 MMP19Q99542 508 aa24.2■■□□□ 1.46
SNX13-206ENST00000474067 FBXO40Q9UH90 709 aa24.2■■□□□ 1.46
SNX13-206ENST00000474067 ATP2A1O14983 1001 aa24.19■■□□□ 1.46
SNX13-206ENST00000474067 FOXP2O15409 715 aa24.19■■□□□ 1.46
SNX13-206ENST00000474067 IKQ13123 557 aaPredicted RBP24.19■■□□□ 1.46
SNX13-206ENST00000474067 NBPF3Q9H094 633 aa24.19■■□□□ 1.46
SNX13-206ENST00000474067 FBXO28Q9NVF7 368 aa24.19■■□□□ 1.46
SNX13-206ENST00000474067 DIS3Q9Y2L1 958 aaKnown RBP24.19■■□□□ 1.46
SNX13-206ENST00000474067 RAD50Q92878 1312 aa24.18■■□□□ 1.46
SNX13-206ENST00000474067 AKNAD1Q5T1N1 836 aa24.18■■□□□ 1.46
SNX13-206ENST00000474067 UBE2Q1Q7Z7E8 422 aa24.18■■□□□ 1.46
SNX13-206ENST00000474067 ZNF589Q86UQ0 364 aaPredicted RBP24.18■■□□□ 1.46
SNX13-206ENST00000474067 STAG1Q8WVM7 1258 aa24.18■■□□□ 1.46
SNX13-206ENST00000474067 ESR2Q92731 530 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms