RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 FEM1BQ9UK73 627 aa16.18■□□□□ 0.18
USF1-205ENST00000473969 MYPNQ86TC9 1320 aa16.18■□□□□ 0.18
USF1-205ENST00000473969 ERICH2A1L162 156 aa16.17■□□□□ 0.18
USF1-205ENST00000473969 SPDYE16A6NNV3 312 aaPredicted RBP16.17■□□□□ 0.18
USF1-205ENST00000473969 MAPK4P31152 587 aa16.17■□□□□ 0.18
USF1-205ENST00000473969 SART3Q15020 963 aaKnown RBP16.17■□□□□ 0.18
USF1-205ENST00000473969 DGKHQ86XP1 1220 aa16.17■□□□□ 0.18
USF1-205ENST00000473969 RAET1EQ8TD07 263 aa16.17■□□□□ 0.18
USF1-205ENST00000473969 ZSCAN10Q96SZ4 725 aaPredicted RBP16.17■□□□□ 0.18
USF1-205ENST00000473969 NUP88Q99567 741 aaPredicted RBP16.17■□□□□ 0.18
USF1-205ENST00000473969 SLF1Q9BQI6 1058 aa16.17■□□□□ 0.18
USF1-205ENST00000473969 ZKSCAN3Q9BRR0 538 aa16.17■□□□□ 0.18
USF1-205ENST00000473969 KAT14Q9H8E8 782 aa16.17■□□□□ 0.18
USF1-205ENST00000473969 ZSWIM5Q9P217 1185 aa16.17■□□□□ 0.18
USF1-205ENST00000473969 PTPN22Q9Y2R2 807 aa16.17■□□□□ 0.18
USF1-205ENST00000473969 E7EWF7 191 aa16.16■□□□□ 0.18
USF1-205ENST00000473969 REC8O95072 547 aa16.16■□□□□ 0.18
USF1-205ENST00000473969 MCCP23508 829 aa16.16■□□□□ 0.18
USF1-205ENST00000473969 PLS1Q14651 629 aa16.16■□□□□ 0.18
USF1-205ENST00000473969 CCDC96Q2M329 555 aa16.16■□□□□ 0.18
USF1-205ENST00000473969 WDR78Q5VTH9 848 aa16.16■□□□□ 0.18
USF1-205ENST00000473969 PRPF38AQ8NAV1 312 aaKnown RBP16.16■□□□□ 0.18
USF1-205ENST00000473969 CHURC1Q8WUH1 139 aa16.16■□□□□ 0.18
USF1-205ENST00000473969 CHMP4CQ96CF2 233 aa16.16■□□□□ 0.18
USF1-205ENST00000473969 ATG4CQ96DT6 458 aa16.16■□□□□ 0.18
USF1-205ENST00000473969 ABHD8Q96I13 439 aa16.16■□□□□ 0.18
USF1-205ENST00000473969 GMCL1Q96IK5 515 aa16.16■□□□□ 0.18
USF1-205ENST00000473969 TMEM47Q9BQJ4 181 aa16.16■□□□□ 0.18
USF1-205ENST00000473969 TXNRD2Q9NNW7 524 aa16.16■□□□□ 0.18
USF1-205ENST00000473969 SRRDQ9UH36 339 aa16.16■□□□□ 0.18
USF1-205ENST00000473969 PPP1R9AQ9ULJ8 1098 aa16.16■□□□□ 0.18
USF1-205ENST00000473969 TMEM232C9JQI7 657 aa16.15■□□□□ 0.18
USF1-205ENST00000473969 ZBED4O75132 1171 aa16.15■□□□□ 0.18
USF1-205ENST00000473969 ZKSCAN1P17029 563 aaPredicted RBP16.15■□□□□ 0.18
USF1-205ENST00000473969 NOVP48745 357 aa16.15■□□□□ 0.18
USF1-205ENST00000473969 Q3C1V9 767 aa16.15■□□□□ 0.18
USF1-205ENST00000473969 CREB3L3Q68CJ9 461 aa16.15■□□□□ 0.18
USF1-205ENST00000473969 RCSD1Q6JBY9 416 aa16.15■□□□□ 0.18
USF1-205ENST00000473969 NBPF11Q86T75 865 aa16.15■□□□□ 0.18
USF1-205ENST00000473969 FAM160B2Q86V87 743 aa16.15■□□□□ 0.18
USF1-205ENST00000473969 DCAF4Q8WV16 495 aa16.15■□□□□ 0.18
USF1-205ENST00000473969 KIFC2Q96AC6 838 aa16.15■□□□□ 0.18
USF1-205ENST00000473969 FBXO28Q9NVF7 368 aa16.15■□□□□ 0.18
USF1-205ENST00000473969 HPS5Q9UPZ3 1129 aa16.15■□□□□ 0.18
USF1-205ENST00000473969 GREB1LQ9C091 1923 aaPredicted RBP16.15■□□□□ 0.18
USF1-205ENST00000473969 SLC27A2O14975 620 aa16.14■□□□□ 0.17
USF1-205ENST00000473969 STAT2P52630 851 aa16.14■□□□□ 0.17
USF1-205ENST00000473969 IFIT1BQ5T764 474 aaKnown RBP16.14■□□□□ 0.17
USF1-205ENST00000473969 BTBD7Q9P203 1132 aa16.14■□□□□ 0.17
USF1-205ENST00000473969 IVNS1ABPQ9Y6Y0 642 aa16.14■□□□□ 0.17
USF1-205ENST00000473969 TNKSO95271 1327 aa16.14■□□□□ 0.17
USF1-205ENST00000473969 CCDC85CA6NKD9 419 aa16.13■□□□□ 0.17
USF1-205ENST00000473969 VWA5AO00534 786 aa16.13■□□□□ 0.17
USF1-205ENST00000473969 IFIT3O14879 490 aaKnown RBP16.13■□□□□ 0.17
USF1-205ENST00000473969 PEX10O60683 326 aa16.13■□□□□ 0.17
USF1-205ENST00000473969 EIF5BO60841 1220 aaKnown RBP16.13■□□□□ 0.17
USF1-205ENST00000473969 CNMDO75829 334 aa16.13■□□□□ 0.17
USF1-205ENST00000473969 FDX1P10109 184 aa16.13■□□□□ 0.17
USF1-205ENST00000473969 CTGFP29279 349 aa16.13■□□□□ 0.17
USF1-205ENST00000473969 PRKCZQ05513 592 aa16.13■□□□□ 0.17
USF1-205ENST00000473969 NECTIN1Q15223 517 aa16.13■□□□□ 0.17
USF1-205ENST00000473969 SLC9C1Q4G0N8 1177 aa16.13■□□□□ 0.17
USF1-205ENST00000473969 KCTD1Q719H9 257 aa16.13■□□□□ 0.17
USF1-205ENST00000473969 PLEKHH3Q7Z736 793 aa16.13■□□□□ 0.17
USF1-205ENST00000473969 NUDT12Q9BQG2 462 aa16.13■□□□□ 0.17
USF1-205ENST00000473969 SPATC1LQ9H0A9 340 aa16.13■□□□□ 0.17
USF1-205ENST00000473969 BIN2Q9UBW5 565 aaPredicted RBP16.13■□□□□ 0.17
USF1-205ENST00000473969 PTCH2Q9Y6C5 1203 aa16.13■□□□□ 0.17
USF1-205ENST00000473969 SLC25A27O95847 323 aa16.12■□□□□ 0.17
USF1-205ENST00000473969 COPB2P35606 906 aa16.12■□□□□ 0.17
USF1-205ENST00000473969 STAT3P40763 770 aa16.12■□□□□ 0.17
USF1-205ENST00000473969 FLT3LGP49771 235 aa16.12■□□□□ 0.17
USF1-205ENST00000473969 CAP1Q01518 475 aa16.12■□□□□ 0.17
USF1-205ENST00000473969 KRT32Q14532 448 aa16.12■□□□□ 0.17
USF1-205ENST00000473969 CYB5R4Q7L1T6 521 aa16.12■□□□□ 0.17
USF1-205ENST00000473969 NCAPG2Q86XI2 1143 aa16.12■□□□□ 0.17
USF1-205ENST00000473969 ENAHQ8N8S7 591 aaPredicted RBP16.12■□□□□ 0.17
USF1-205ENST00000473969 PNMA1Q8ND90 353 aa16.12■□□□□ 0.17
USF1-205ENST00000473969 LAMA4Q16363 1823 aa16.12■□□□□ 0.17
USF1-205ENST00000473969 PLA2G6O60733 806 aa16.11■□□□□ 0.17
USF1-205ENST00000473969 MCM5P33992 734 aa16.11■□□□□ 0.17
USF1-205ENST00000473969 SLC4A3P48751 1232 aa16.11■□□□□ 0.17
USF1-205ENST00000473969 WTAPQ15007 396 aa16.11■□□□□ 0.17
USF1-205ENST00000473969 GPR142Q7Z601 462 aa16.11■□□□□ 0.17
USF1-205ENST00000473969 CPXCR1Q8N123 301 aa16.11■□□□□ 0.17
USF1-205ENST00000473969 SHCBP1Q8NEM2 672 aa16.11■□□□□ 0.17
USF1-205ENST00000473969 NKX2-3Q8TAU0 364 aa16.11■□□□□ 0.17
USF1-205ENST00000473969 SOCS4Q8WXH5 440 aa16.11■□□□□ 0.17
USF1-205ENST00000473969 ANKS1AQ92625 1134 aa16.11■□□□□ 0.17
USF1-205ENST00000473969 MOV10L1Q9BXT6 1211 aaKnown RBP16.11■□□□□ 0.17
USF1-205ENST00000473969 PORCNQ9H237 461 aa16.11■□□□□ 0.17
USF1-205ENST00000473969 MROH8Q9H579 483 aa16.11■□□□□ 0.17
USF1-205ENST00000473969 GABRQQ9UN88 632 aa16.11■□□□□ 0.17
USF1-205ENST00000473969 ADAMTS5Q9UNA0 930 aa16.11■□□□□ 0.17
USF1-205ENST00000473969 MYH4Q9Y623 1939 aa16.11■□□□□ 0.17
USF1-205ENST00000473969 PDHBP11177 359 aa16.1■□□□□ 0.17
USF1-205ENST00000473969 ERCC3P19447 782 aa16.1■□□□□ 0.17
USF1-205ENST00000473969 GRK4P32298 578 aa16.1■□□□□ 0.17
USF1-205ENST00000473969 IRF5Q13568 498 aa16.1■□□□□ 0.17
USF1-205ENST00000473969 TMEM132BQ14DG7 1078 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms