RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 CDC5LQ99459 802 aaKnown RBP12.42□□□□□ -0.42
C9orf3-214ENST00000473778 ZSWIM4Q9H7M6 989 aa12.42□□□□□ -0.42
C9orf3-214ENST00000473778 BSDC1Q9NW68 430 aaPredicted RBP12.42□□□□□ -0.42
C9orf3-214ENST00000473778 MFAP3LO75121 409 aa12.41□□□□□ -0.42
C9orf3-214ENST00000473778 XBP1P17861 261 aa12.41□□□□□ -0.42
C9orf3-214ENST00000473778 DDB1Q16531 1140 aa12.41□□□□□ -0.42
C9orf3-214ENST00000473778 TEX35Q5T0J7 233 aa12.41□□□□□ -0.42
C9orf3-214ENST00000473778 BICDL1Q6ZP65 573 aa12.41□□□□□ -0.42
C9orf3-214ENST00000473778 TXNRD3Q86VQ6 643 aa12.41□□□□□ -0.42
C9orf3-214ENST00000473778 CCDC12Q8WUD4 166 aaPredicted RBP12.41□□□□□ -0.42
C9orf3-214ENST00000473778 MAPK8IP1Q9UQF2 711 aa12.41□□□□□ -0.42
C9orf3-214ENST00000473778 CCDC66A2RUB6 948 aa12.41□□□□□ -0.42
C9orf3-214ENST00000473778 CCDC175P0C221 793 aa12.41□□□□□ -0.42
C9orf3-214ENST00000473778 ERVK-24P63145 666 aa12.41□□□□□ -0.42
C9orf3-214ENST00000473778 SLC20A2Q08357 652 aa12.41□□□□□ -0.42
C9orf3-214ENST00000473778 KRT31Q15323 416 aa12.41□□□□□ -0.42
C9orf3-214ENST00000473778 TYW1BQ6NUM6 668 aa12.41□□□□□ -0.42
C9orf3-214ENST00000473778 CC2D1AQ6P1N0 951 aaPredicted RBP12.41□□□□□ -0.42
C9orf3-214ENST00000473778 TMCO3Q6UWJ1 677 aa12.41□□□□□ -0.42
C9orf3-214ENST00000473778 CCDC24Q8N4L8 307 aa12.41□□□□□ -0.42
C9orf3-214ENST00000473778 ACRBPQ8NEB7 543 aa12.41□□□□□ -0.42
C9orf3-214ENST00000473778 RASGRP4Q8TDF6 673 aa12.41□□□□□ -0.42
C9orf3-214ENST00000473778 PARD6BQ9BYG5 372 aa12.41□□□□□ -0.42
C9orf3-214ENST00000473778 RBM28Q9NW13 759 aaKnown RBP12.41□□□□□ -0.42
C9orf3-214ENST00000473778 TFCP2L1Q9NZI6 479 aa12.41□□□□□ -0.42
C9orf3-214ENST00000473778 SPATA31A1Q5TZJ5 1347 aa12.4□□□□□ -0.42
C9orf3-214ENST00000473778 GOLGA6L9A6NEM1 432 aa12.4□□□□□ -0.42
C9orf3-214ENST00000473778 DDAH1O94760 285 aa12.4□□□□□ -0.42
C9orf3-214ENST00000473778 SCG2P13521 617 aa12.4□□□□□ -0.42
C9orf3-214ENST00000473778 SF3B3Q15393 1217 aaKnown RBP12.4□□□□□ -0.42
C9orf3-214ENST00000473778 SLC35G1Q2M3R5 365 aa12.4□□□□□ -0.42
C9orf3-214ENST00000473778 C4orf32Q8N8J7 132 aa12.4□□□□□ -0.42
C9orf3-214ENST00000473778 UBXN6Q9BZV1 441 aa12.4□□□□□ -0.42
C9orf3-214ENST00000473778 GDAQ9Y2T3 454 aa12.4□□□□□ -0.42
C9orf3-214ENST00000473778 CAVIN4Q5BKX8 364 aa12.4□□□□□ -0.43
C9orf3-214ENST00000473778 FBXO33Q7Z6M2 555 aa12.4□□□□□ -0.43
C9orf3-214ENST00000473778 STAG2Q8N3U4 1231 aa12.4□□□□□ -0.43
C9orf3-214ENST00000473778 LINC00116Q8NCU8 138 aa12.4□□□□□ -0.43
C9orf3-214ENST00000473778 LRRC15Q8TF66 581 aa12.4□□□□□ -0.43
C9orf3-214ENST00000473778 GPKOWQ92917 476 aaPredicted RBP eCLIP12.4□□□□□ -0.43
C9orf3-214ENST00000473778 NOL10Q9BSC4 688 aaKnown RBP12.4□□□□□ -0.43
C9orf3-214ENST00000473778 ZCCHC17Q9NP64 241 aaKnown RBP12.4□□□□□ -0.43
C9orf3-214ENST00000473778 GNL3LQ9NVN8 582 aaKnown RBP12.4□□□□□ -0.43
C9orf3-214ENST00000473778 PP2D1A8MPX8 630 aa12.39□□□□□ -0.43
C9orf3-214ENST00000473778 ADAMTS2O95450 1211 aa12.39□□□□□ -0.43
C9orf3-214ENST00000473778 PFKFB3Q16875 520 aaPredicted RBP12.39□□□□□ -0.43
C9orf3-214ENST00000473778 RASGRP2Q7LDG7 609 aa12.39□□□□□ -0.43
C9orf3-214ENST00000473778 VPS16Q9H269 839 aa12.39□□□□□ -0.43
C9orf3-214ENST00000473778 IL17RBQ9NRM6 502 aa12.39□□□□□ -0.43
C9orf3-214ENST00000473778 NRAPQ86VF7 1730 aa12.39□□□□□ -0.43
C9orf3-214ENST00000473778 TRIM49BA6NDI0 452 aa12.38□□□□□ -0.43
C9orf3-214ENST00000473778 ERICH4A6NGS2 130 aa12.38□□□□□ -0.43
C9orf3-214ENST00000473778 ORC4O43929 436 aa12.38□□□□□ -0.43
C9orf3-214ENST00000473778 USP17L8P0C7I0 530 aa12.38□□□□□ -0.43
C9orf3-214ENST00000473778 FECHP22830 423 aa12.38□□□□□ -0.43
C9orf3-214ENST00000473778 PMS1P54277 932 aaKnown RBP12.38□□□□□ -0.43
C9orf3-214ENST00000473778 NLRP5P59047 1200 aa12.38□□□□□ -0.43
C9orf3-214ENST00000473778 RRAGBQ5VZM2 374 aa12.38□□□□□ -0.43
C9orf3-214ENST00000473778 TBC1D9BQ66K14 1250 aa12.38□□□□□ -0.43
C9orf3-214ENST00000473778 PTF1AQ7RTS3 328 aa12.38□□□□□ -0.43
C9orf3-214ENST00000473778 IRF2BP1Q8IU81 584 aa12.38□□□□□ -0.43
C9orf3-214ENST00000473778 GPR161Q8N6U8 529 aaKnown RBP12.38□□□□□ -0.43
C9orf3-214ENST00000473778 ZBTB9Q96C00 473 aa12.38□□□□□ -0.43
C9orf3-214ENST00000473778 CCDC34Q96HJ3 373 aa12.38□□□□□ -0.43
C9orf3-214ENST00000473778 TAB2Q9NYJ8 693 aa12.38□□□□□ -0.43
C9orf3-214ENST00000473778 LRRC10BA6NIK2 292 aa12.38□□□□□ -0.43
C9orf3-214ENST00000473778 CALM1P0DP23 149 aa12.38□□□□□ -0.43
C9orf3-214ENST00000473778 CALM2P0DP24 149 aa12.38□□□□□ -0.43
C9orf3-214ENST00000473778 CALM3P0DP25 149 aa12.38□□□□□ -0.43
C9orf3-214ENST00000473778 NAALADL2Q58DX5 795 aa12.38□□□□□ -0.43
C9orf3-214ENST00000473778 CT47A1Q5JQC4 288 aaPredicted RBP12.38□□□□□ -0.43
C9orf3-214ENST00000473778 PPFIBP1Q86W92 1011 aa12.38□□□□□ -0.43
C9orf3-214ENST00000473778 CTCFLQ8NI51 663 aaPredicted RBP12.38□□□□□ -0.43
C9orf3-214ENST00000473778 ARGLU1Q9NWB6 273 aaPredicted RBP12.38□□□□□ -0.43
C9orf3-214ENST00000473778 PRCPP42785 496 aa12.37□□□□□ -0.43
C9orf3-214ENST00000473778 IQUBQ8NA54 791 aa12.37□□□□□ -0.43
C9orf3-214ENST00000473778 FUT8Q9BYC5 575 aa12.37□□□□□ -0.43
C9orf3-214ENST00000473778 ANKZF1Q9H8Y5 726 aa12.37□□□□□ -0.43
C9orf3-214ENST00000473778 BRMS1Q9HCU9 246 aa12.37□□□□□ -0.43
C9orf3-214ENST00000473778 ABHD10Q9NUJ1 306 aa12.37□□□□□ -0.43
C9orf3-214ENST00000473778 LIMA1Q9UHB6 759 aaKnown RBP12.37□□□□□ -0.43
C9orf3-214ENST00000473778 PUF60Q9UHX1 559 aaKnown RBP12.37□□□□□ -0.43
C9orf3-214ENST00000473778 CCDC88AQ3V6T2 1871 aa12.37□□□□□ -0.43
C9orf3-214ENST00000473778 M0R2N6 131 aa12.37□□□□□ -0.43
C9orf3-214ENST00000473778 SEMA3EO15041 775 aa12.37□□□□□ -0.43
C9orf3-214ENST00000473778 POLR3GO15318 223 aaPredicted RBP12.37□□□□□ -0.43
C9orf3-214ENST00000473778 BMP15O95972 392 aa12.37□□□□□ -0.43
C9orf3-214ENST00000473778 ARHGAP25P42331 645 aa12.37□□□□□ -0.43
C9orf3-214ENST00000473778 TCP11X2Q5H9J9 407 aa12.37□□□□□ -0.43
C9orf3-214ENST00000473778 ZNF569Q5MCW4 686 aa12.37□□□□□ -0.43
C9orf3-214ENST00000473778 CREBRFQ8IUR6 639 aa12.37□□□□□ -0.43
C9orf3-214ENST00000473778 NELFBQ8WX92 580 aa12.37□□□□□ -0.43
C9orf3-214ENST00000473778 RABGGTAQ92696 567 aa12.37□□□□□ -0.43
C9orf3-214ENST00000473778 DYNLL2Q96FJ2 89 aa12.37□□□□□ -0.43
C9orf3-214ENST00000473778 CTAGE1Q96RT6 745 aa12.37□□□□□ -0.43
C9orf3-214ENST00000473778 TMEM60Q9H2L4 133 aa12.37□□□□□ -0.43
C9orf3-214ENST00000473778 ITIH6Q6UXX5 1313 aa12.37□□□□□ -0.43
C9orf3-214ENST00000473778 GOLGB1Q14789 3259 aaKnown RBP12.37□□□□□ -0.43
C9orf3-214ENST00000473778 N4BP3O15049 544 aa12.36□□□□□ -0.43
C9orf3-214ENST00000473778 CYTH3O43739 400 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms