RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 CEP350Q5VT06 3117 aa17.09■□□□□ 0.33
LMNA-213ENST00000473598 FMNL1O95466 1100 aaPredicted RBP17.09■□□□□ 0.33
LMNA-213ENST00000473598 KIF5BP33176 963 aa17.09■□□□□ 0.33
LMNA-213ENST00000473598 SSRP1Q08945 709 aaKnown RBP17.09■□□□□ 0.33
LMNA-213ENST00000473598 CLEC10AQ8IUN9 316 aa17.09■□□□□ 0.33
LMNA-213ENST00000473598 ARID3AQ99856 593 aa17.09■□□□□ 0.33
LMNA-213ENST00000473598 DEFB129Q9H1M3 183 aa17.09■□□□□ 0.33
LMNA-213ENST00000473598 TCHHQ07283 1943 aa17.09■□□□□ 0.33
LMNA-213ENST00000473598 GDF11O95390 407 aa17.08■□□□□ 0.33
LMNA-213ENST00000473598 RRP1BQ14684 758 aaKnown RBP17.08■□□□□ 0.33
LMNA-213ENST00000473598 GRM4Q14833 912 aa17.08■□□□□ 0.33
LMNA-213ENST00000473598 SHROOM1Q2M3G4 852 aaPredicted RBP17.08■□□□□ 0.33
LMNA-213ENST00000473598 CMTR1Q8N1G2 835 aaKnown RBP17.08■□□□□ 0.33
LMNA-213ENST00000473598 SLC26A6Q9BXS9 759 aa17.08■□□□□ 0.33
LMNA-213ENST00000473598 KANSL2Q9H9L4 492 aa17.08■□□□□ 0.33
LMNA-213ENST00000473598 CLIP2Q9UDT6 1046 aa17.08■□□□□ 0.33
LMNA-213ENST00000473598 PLEKHA8P1O95397 391 aa17.08■□□□□ 0.32
LMNA-213ENST00000473598 F13A1P00488 732 aa17.08■□□□□ 0.32
LMNA-213ENST00000473598 FUT2Q10981 343 aa17.08■□□□□ 0.32
LMNA-213ENST00000473598 TMTC3Q6ZXV5 915 aa17.08■□□□□ 0.32
LMNA-213ENST00000473598 CDC37L1Q7L3B6 337 aa17.08■□□□□ 0.32
LMNA-213ENST00000473598 MIGA2Q7L4E1 593 aa17.08■□□□□ 0.32
LMNA-213ENST00000473598 SULF1Q8IWU6 871 aa17.08■□□□□ 0.32
LMNA-213ENST00000473598 TRIM22Q8IYM9 498 aa17.08■□□□□ 0.32
LMNA-213ENST00000473598 CCDC82Q8N4S0 544 aa17.08■□□□□ 0.32
LMNA-213ENST00000473598 PITPNM2Q9BZ72 1349 aa17.07■□□□□ 0.32
LMNA-213ENST00000473598 H3BQV1 296 aa17.07■□□□□ 0.32
LMNA-213ENST00000473598 GUCY1A2P33402 732 aa17.07■□□□□ 0.32
LMNA-213ENST00000473598 GTF2F1P35269 517 aaKnown RBP eCLIP17.07■□□□□ 0.32
LMNA-213ENST00000473598 ZNF445P59923 1031 aa17.07■□□□□ 0.32
LMNA-213ENST00000473598 SEPT2Q15019 361 aa17.07■□□□□ 0.32
LMNA-213ENST00000473598 IFFO2Q5TF58 517 aa17.07■□□□□ 0.32
LMNA-213ENST00000473598 TEX2Q8IWB9 1127 aa17.07■□□□□ 0.32
LMNA-213ENST00000473598 PRIMPOLQ96LW4 560 aa17.07■□□□□ 0.32
LMNA-213ENST00000473598 RNF26Q9BY78 433 aaPredicted RBP17.07■□□□□ 0.32
LMNA-213ENST00000473598 CABP5Q9NP86 173 aa17.07■□□□□ 0.32
LMNA-213ENST00000473598 MAD2L2Q9UI95 211 aa17.07■□□□□ 0.32
LMNA-213ENST00000473598 MYH15Q9Y2K3 1946 aa17.06■□□□□ 0.32
LMNA-213ENST00000473598 GH2P01242 217 aa17.06■□□□□ 0.32
LMNA-213ENST00000473598 JAG1P78504 1218 aa17.06■□□□□ 0.32
LMNA-213ENST00000473598 FSTL1Q12841 308 aa17.06■□□□□ 0.32
LMNA-213ENST00000473598 NYAP2Q9P242 653 aa17.06■□□□□ 0.32
LMNA-213ENST00000473598 BAZ2BQ9UIF8 2168 aaKnown RBP17.06■□□□□ 0.32
LMNA-213ENST00000473598 C1QTNF8P60827 252 aa17.06■□□□□ 0.32
LMNA-213ENST00000473598 LRRC47Q8N1G4 583 aaKnown RBP17.06■□□□□ 0.32
LMNA-213ENST00000473598 SRBD1Q8N5C6 995 aaKnown RBP17.06■□□□□ 0.32
LMNA-213ENST00000473598 RGS22Q8NE09 1264 aa17.06■□□□□ 0.32
LMNA-213ENST00000473598 GPT2Q8TD30 523 aa17.06■□□□□ 0.32
LMNA-213ENST00000473598 WASF1Q92558 559 aa17.06■□□□□ 0.32
LMNA-213ENST00000473598 MKL1Q969V6 931 aa17.06■□□□□ 0.32
LMNA-213ENST00000473598 C8orf76Q96K31 380 aa17.06■□□□□ 0.32
LMNA-213ENST00000473598 ALG1Q9BT22 464 aa17.06■□□□□ 0.32
LMNA-213ENST00000473598 ZNF408Q9H9D4 720 aa17.06■□□□□ 0.32
LMNA-213ENST00000473598 CCDC39Q9UFE4 941 aa17.06■□□□□ 0.32
LMNA-213ENST00000473598 PASKQ96RG2 1323 aa17.06■□□□□ 0.32
LMNA-213ENST00000473598 PALM3A6NDB9 673 aaPredicted RBP17.05■□□□□ 0.32
LMNA-213ENST00000473598 DEXIO95424 95 aa17.05■□□□□ 0.32
LMNA-213ENST00000473598 EEF2P13639 858 aaKnown RBP17.05■□□□□ 0.32
LMNA-213ENST00000473598 GNAQP50148 359 aa17.05■□□□□ 0.32
LMNA-213ENST00000473598 FOSBP53539 338 aa17.05■□□□□ 0.32
LMNA-213ENST00000473598 ICA1Q05084 483 aa17.05■□□□□ 0.32
LMNA-213ENST00000473598 STAG2Q8N3U4 1231 aa17.05■□□□□ 0.32
LMNA-213ENST00000473598 MTMR7Q9Y216 660 aa17.05■□□□□ 0.32
LMNA-213ENST00000473598 PPP2R3BQ9Y5P8 575 aa17.05■□□□□ 0.32
LMNA-213ENST00000473598 CNTNAP5Q8WYK1 1306 aa17.05■□□□□ 0.32
LMNA-213ENST00000473598 PRPF3O43395 683 aaKnown RBP17.04■□□□□ 0.32
LMNA-213ENST00000473598 CHRM1P11229 460 aaPredicted RBP17.04■□□□□ 0.32
LMNA-213ENST00000473598 ATP2B2Q01814 1243 aa17.04■□□□□ 0.32
LMNA-213ENST00000473598 NBPF12Q5TAG4 269 aaPredicted RBP17.04■□□□□ 0.32
LMNA-213ENST00000473598 SIAH1Q8IUQ4 282 aa17.04■□□□□ 0.32
LMNA-213ENST00000473598 FBXO18Q8NFZ0 1043 aa17.04■□□□□ 0.32
LMNA-213ENST00000473598 AIFM3Q96NN9 605 aa17.04■□□□□ 0.32
LMNA-213ENST00000473598 UBE2Q2LH0YL09 131 aa17.04■□□□□ 0.32
LMNA-213ENST00000473598 PARP1P09874 1014 aaKnown RBP17.04■□□□□ 0.32
LMNA-213ENST00000473598 SNHG28P0DPA3 235 aa17.04■□□□□ 0.32
LMNA-213ENST00000473598 PDHBP11177 359 aa17.04■□□□□ 0.32
LMNA-213ENST00000473598 CAP2P40123 477 aa17.04■□□□□ 0.32
LMNA-213ENST00000473598 CBX1P83916 185 aa17.04■□□□□ 0.32
LMNA-213ENST00000473598 AKAP17AQ02040 695 aaKnown RBP17.04■□□□□ 0.32
LMNA-213ENST00000473598 CDCA5Q96FF9 252 aa17.04■□□□□ 0.32
LMNA-213ENST00000473598 ZBTB21Q9ULJ3 1066 aa17.04■□□□□ 0.32
LMNA-213ENST00000473598 ATP6V1DQ9Y5K8 247 aa17.04■□□□□ 0.32
LMNA-213ENST00000473598 USP17L5A8MUK1 530 aa17.03■□□□□ 0.32
LMNA-213ENST00000473598 VGLL3A8MV65 326 aa17.03■□□□□ 0.32
LMNA-213ENST00000473598 PHF20L1A8MW92 1017 aa17.03■□□□□ 0.32
LMNA-213ENST00000473598 DNTTIP2Q5QJE6 756 aaKnown RBP17.03■□□□□ 0.32
LMNA-213ENST00000473598 CAVIN1Q6NZI2 390 aaKnown RBP17.03■□□□□ 0.32
LMNA-213ENST00000473598 USP17L2Q6R6M4 530 aa17.03■□□□□ 0.32
LMNA-213ENST00000473598 RASGRP2Q7LDG7 609 aa17.03■□□□□ 0.32
LMNA-213ENST00000473598 HOOK2Q96ED9 719 aa17.03■□□□□ 0.32
LMNA-213ENST00000473598 LZTS2Q9BRK4 669 aa17.03■□□□□ 0.32
LMNA-213ENST00000473598 FZD1Q9UP38 647 aa17.03■□□□□ 0.32
LMNA-213ENST00000473598 PCNTO95613 3336 aa17.03■□□□□ 0.32
LMNA-213ENST00000473598 GUCY1B3Q02153 619 aa17.03■□□□□ 0.32
LMNA-213ENST00000473598 CST9Q5W186 159 aa17.03■□□□□ 0.32
LMNA-213ENST00000473598 FERMT3Q86UX7 667 aa17.03■□□□□ 0.32
LMNA-213ENST00000473598 V9GY48 417 aaPredicted RBP17.03■□□□□ 0.32
LMNA-213ENST00000473598 DOCK1Q14185 1865 aa17.02■□□□□ 0.32
LMNA-213ENST00000473598 KLRF2D3W0D1 207 aa17.02■□□□□ 0.32
LMNA-213ENST00000473598 MBD3O95983 291 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms