RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 CEP112Q8N8E3 955 aa23.88■■□□□ 1.41
COL18A1-207ENST00000473212 SEMA3EO15041 775 aa23.87■■□□□ 1.41
COL18A1-207ENST00000473212 PRDX5P30044 214 aa23.87■■□□□ 1.41
COL18A1-207ENST00000473212 SLC35F6Q8N357 371 aa23.87■■□□□ 1.41
COL18A1-207ENST00000473212 CDC5LQ99459 802 aaKnown RBP23.87■■□□□ 1.41
COL18A1-207ENST00000473212 PPP2R5BQ15173 497 aa23.87■■□□□ 1.41
COL18A1-207ENST00000473212 E2F4Q16254 413 aa23.87■■□□□ 1.41
COL18A1-207ENST00000473212 VPS16Q9H269 839 aa23.87■■□□□ 1.41
COL18A1-207ENST00000473212 H3BQF6 201 aa23.86■■□□□ 1.41
COL18A1-207ENST00000473212 ATP2C1P98194 919 aaPredicted RBP23.86■■□□□ 1.41
COL18A1-207ENST00000473212 MECOMQ03112 1051 aa23.86■■□□□ 1.41
COL18A1-207ENST00000473212 KRT31Q15323 416 aa23.86■■□□□ 1.41
COL18A1-207ENST00000473212 TXLNBQ8N3L3 684 aa23.86■■□□□ 1.41
COL18A1-207ENST00000473212 GPKOWQ92917 476 aaPredicted RBP eCLIP23.86■■□□□ 1.412e-6■■■■■ 37.1
COL18A1-207ENST00000473212 PNKPQ96T60 521 aa23.86■■□□□ 1.41
COL18A1-207ENST00000473212 CTAGE9A4FU28 777 aa23.86■■□□□ 1.41
COL18A1-207ENST00000473212 DDB1Q16531 1140 aa23.86■■□□□ 1.41
COL18A1-207ENST00000473212 MAP2K7O14733 419 aa23.85■■□□□ 1.41
COL18A1-207ENST00000473212 N4BP3O15049 544 aa23.85■■□□□ 1.41
COL18A1-207ENST00000473212 ERVK-24P63145 666 aa23.85■■□□□ 1.41
COL18A1-207ENST00000473212 IRX5P78411 483 aaPredicted RBP23.85■■□□□ 1.41
COL18A1-207ENST00000473212 RRAGBQ5VZM2 374 aa23.85■■□□□ 1.41
COL18A1-207ENST00000473212 NSUN4Q96CB9 384 aaKnown RBP23.85■■□□□ 1.41
COL18A1-207ENST00000473212 TRERF1Q96PN7 1200 aa23.85■■□□□ 1.41
COL18A1-207ENST00000473212 BRIP1Q9BX63 1249 aa23.85■■□□□ 1.41
COL18A1-207ENST00000473212 MTMR7Q9Y216 660 aa23.85■■□□□ 1.41
COL18A1-207ENST00000473212 GDAQ9Y2T3 454 aa23.85■■□□□ 1.41
COL18A1-207ENST00000473212 FAM205AQ6ZU69 1335 aa23.85■■□□□ 1.41
COL18A1-207ENST00000473212 BMP15O95972 392 aa23.85■■□□□ 1.41
COL18A1-207ENST00000473212 NLRP5P59047 1200 aa23.85■■□□□ 1.41
COL18A1-207ENST00000473212 PDXDC2PQ6P474 469 aa23.85■■□□□ 1.41
COL18A1-207ENST00000473212 BRMS1Q9HCU9 246 aa23.85■■□□□ 1.41
COL18A1-207ENST00000473212 DCP1AQ9NPI6 582 aaPredicted RBP23.85■■□□□ 1.41
COL18A1-207ENST00000473212 GNL3LQ9NVN8 582 aaKnown RBP23.85■■□□□ 1.41
COL18A1-207ENST00000473212 TAB2Q9NYJ8 693 aa23.85■■□□□ 1.41
COL18A1-207ENST00000473212 GPS2Q13227 327 aa23.84■■□□□ 1.41
COL18A1-207ENST00000473212 CCDC51Q96ER9 411 aa23.84■■□□□ 1.41
COL18A1-207ENST00000473212 TTF2Q9UNY4 1162 aaKnown RBP23.84■■□□□ 1.41
COL18A1-207ENST00000473212 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.84■■□□□ 1.412e-6■■■□□ 15.2
COL18A1-207ENST00000473212 ITIH6Q6UXX5 1313 aa23.84■■□□□ 1.41
COL18A1-207ENST00000473212 MCM6Q14566 821 aa23.84■■□□□ 1.41
COL18A1-207ENST00000473212 CAVIN4Q5BKX8 364 aa23.84■■□□□ 1.41
COL18A1-207ENST00000473212 BEND6Q5SZJ8 279 aaPredicted RBP23.84■■□□□ 1.41
COL18A1-207ENST00000473212 ABHD10Q9NUJ1 306 aa23.84■■□□□ 1.41
COL18A1-207ENST00000473212 PP2D1A8MPX8 630 aa23.83■■□□□ 1.41
COL18A1-207ENST00000473212 TXNRD3Q86VQ6 643 aa23.83■■□□□ 1.41
COL18A1-207ENST00000473212 PLIN2Q99541 437 aa23.83■■□□□ 1.41
COL18A1-207ENST00000473212 TRIM49BA6NDI0 452 aa23.83■■□□□ 1.41
COL18A1-207ENST00000473212 FECHP22830 423 aa23.83■■□□□ 1.41
COL18A1-207ENST00000473212 UBE4AQ14139 1066 aa23.83■■□□□ 1.41
COL18A1-207ENST00000473212 TMTC1Q8IUR5 882 aa23.83■■□□□ 1.41
COL18A1-207ENST00000473212 CTCFLQ8NI51 663 aaPredicted RBP23.83■■□□□ 1.41
COL18A1-207ENST00000473212 NUP88Q99567 741 aaPredicted RBP23.83■■□□□ 1.41
COL18A1-207ENST00000473212 RBM28Q9NW13 759 aaKnown RBP23.83■■□□□ 1.41
COL18A1-207ENST00000473212 LIMA1Q9UHB6 759 aaKnown RBP23.83■■□□□ 1.41
COL18A1-207ENST00000473212 ADAM21Q9UKJ8 722 aa23.83■■□□□ 1.41
COL18A1-207ENST00000473212 FGRP09769 529 aa23.82■■□□□ 1.4
COL18A1-207ENST00000473212 RHOXF2BP0C7M4 288 aa23.82■■□□□ 1.4
COL18A1-207ENST00000473212 SCG2P13521 617 aa23.82■■□□□ 1.4
COL18A1-207ENST00000473212 TYW1BQ6NUM6 668 aa23.82■■□□□ 1.4
COL18A1-207ENST00000473212 STAG2Q8N3U4 1231 aa23.82■■□□□ 1.4
COL18A1-207ENST00000473212 IQUBQ8NA54 791 aa23.82■■□□□ 1.4
COL18A1-207ENST00000473212 MSANTD4Q8NCY6 345 aa23.82■■□□□ 1.4
COL18A1-207ENST00000473212 HNRNPLLQ8WVV9 542 aaKnown RBP23.82■■□□□ 1.4
COL18A1-207ENST00000473212 EEF2KMTQ96G04 330 aa23.82■■□□□ 1.4
COL18A1-207ENST00000473212 RHOXF2Q9BQY4 288 aa23.82■■□□□ 1.4
COL18A1-207ENST00000473212 RAB21Q9UL25 225 aa23.82■■□□□ 1.4
COL18A1-207ENST00000473212 A0A1B0GUL6 1792 aa23.82■■□□□ 1.4
COL18A1-207ENST00000473212 A0A0U1RQG5 324 aaPredicted RBP23.82■■□□□ 1.4
COL18A1-207ENST00000473212 USP17L8P0C7I0 530 aa23.82■■□□□ 1.4
COL18A1-207ENST00000473212 COPB1P53618 953 aaKnown RBP23.82■■□□□ 1.4
COL18A1-207ENST00000473212 RCSD1Q6JBY9 416 aa23.82■■□□□ 1.4
COL18A1-207ENST00000473212 PDE11AQ9HCR9 933 aa23.82■■□□□ 1.4
COL18A1-207ENST00000473212 BSDC1Q9NW68 430 aaPredicted RBP23.82■■□□□ 1.4
COL18A1-207ENST00000473212 NAPGQ99747 312 aaPredicted RBP23.81■■□□□ 1.4
COL18A1-207ENST00000473212 SUGCTQ9HAC7 445 aa23.81■■□□□ 1.4
COL18A1-207ENST00000473212 POTEB2H3BUK9 544 aa23.81■■□□□ 1.4
COL18A1-207ENST00000473212 USP5P45974 858 aa23.81■■□□□ 1.4
COL18A1-207ENST00000473212 TUBB2AQ13885 445 aa23.81■■□□□ 1.4
COL18A1-207ENST00000473212 TUBB2BQ9BVA1 445 aa23.81■■□□□ 1.4
COL18A1-207ENST00000473212 ABCB6Q9NP58 842 aa23.81■■□□□ 1.4
COL18A1-207ENST00000473212 RWDD2AQ9UIY3 292 aa23.81■■□□□ 1.4
COL18A1-207ENST00000473212 LRRC10BA6NIK2 292 aa23.8■■□□□ 1.4
COL18A1-207ENST00000473212 DDAH1O94760 285 aa23.8■■□□□ 1.4
COL18A1-207ENST00000473212 ARHGAP25P42331 645 aa23.8■■□□□ 1.4
COL18A1-207ENST00000473212 CYP26C1Q6V0L0 522 aa23.8■■□□□ 1.4
COL18A1-207ENST00000473212 SLF1Q9BQI6 1058 aa23.8■■□□□ 1.4
COL18A1-207ENST00000473212 TFR2Q9UP52 801 aa23.8■■□□□ 1.4
COL18A1-207ENST00000473212 COL16A1Q07092 1604 aaPredicted RBP23.8■■□□□ 1.4
COL18A1-207ENST00000473212 COL14A1Q05707 1796 aaKnown RBP23.8■■□□□ 1.4
COL18A1-207ENST00000473212 PAK1Q13153 545 aa23.8■■□□□ 1.4
COL18A1-207ENST00000473212 HDXQ7Z353 690 aa23.8■■□□□ 1.4
COL18A1-207ENST00000473212 LINC00116Q8NCU8 138 aa23.8■■□□□ 1.4
COL18A1-207ENST00000473212 NELFBQ8WX92 580 aa23.8■■□□□ 1.4
COL18A1-207ENST00000473212 DYNLL2Q96FJ2 89 aa23.8■■□□□ 1.4
COL18A1-207ENST00000473212 TSPY2A6NKD2 308 aa23.79■■□□□ 1.4
COL18A1-207ENST00000473212 KCNJ18B7U540 433 aa23.79■■□□□ 1.4
COL18A1-207ENST00000473212 TULP2O00295 520 aa23.79■■□□□ 1.4
COL18A1-207ENST00000473212 PMS1P54277 932 aaKnown RBP23.79■■□□□ 1.4
COL18A1-207ENST00000473212 KCNJ12Q14500 433 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms