RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 KCNK3O14649 394 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 ATXN7O15265 892 aaPredicted RBP3.43□□□□□ -1.86
XRN1-210ENST00000472697 DLX3O60479 287 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 CAND2O75155 1236 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 GLRX3O76003 335 aaKnown RBP3.43□□□□□ -1.86
XRN1-210ENST00000472697 FGAP02671 866 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 KCNA6P17658 529 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 ARNTP27540 789 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 GRK4P32298 578 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 GPC1P35052 558 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 LONRF3Q496Y0 759 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 PKDCCQ504Y2 493 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 SYDE2Q5VT97 1194 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 CYB5RLQ6IPT4 315 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 C8orf86Q6ZUL3 223 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 TRIM46Q7Z4K8 759 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 TCEAL8Q8IYN2 117 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 PI4K2BQ8TCG2 481 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 NUDT8Q8WV74 236 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 GMIPQ9P107 970 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 SAP30BPQ9UHR5 308 aaKnown RBP3.43□□□□□ -1.86
XRN1-210ENST00000472697 MAPRE3Q9UPY8 281 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 PCDHGB6Q9Y5F9 930 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 PCDHA8Q9Y5H6 950 aa3.43□□□□□ -1.86
XRN1-210ENST00000472697 IFT140Q96RY7 1462 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 DYTNA2CJ06 578 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 PLD2O14939 933 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 PMM2O15305 246 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 ZRANB2O95218 330 aaKnown RBP eCLIP3.42□□□□□ -1.86
XRN1-210ENST00000472697 MAP3K6O95382 1288 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 APBA3O96018 575 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 GSTP1P09211 210 aaKnown RBP3.42□□□□□ -1.86
XRN1-210ENST00000472697 GRIK1P39086 918 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 KCNQ4P56696 695 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 TRIM14Q14142 442 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 CCSAPQ6IQ19 270 aaPredicted RBP3.42□□□□□ -1.86
XRN1-210ENST00000472697 FAM35AQ86V20 835 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 MYRIPQ8NFW9 859 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 BAHD1Q8TBE0 780 aaPredicted RBP3.42□□□□□ -1.86
XRN1-210ENST00000472697 BSNDQ8WZ55 320 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.42□□□□□ -1.86
XRN1-210ENST00000472697 C14orf119Q9NWQ9 140 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 DNAJB12Q9NXW2 375 aaKnown RBP3.42□□□□□ -1.86
XRN1-210ENST00000472697 LUZP4Q9P127 313 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 LRP2BPQ9P2M1 347 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 NRBP1Q9UHY1 535 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 IPPQ9Y573 584 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 PRR36Q9H6K5 1346 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 TCRBV16S1A1N1A0A5B0 115 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 USP14P54578 494 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 ERVK-21P61565 698 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 SLC7A5Q01650 507 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 HYAL2Q12891 473 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 GRAMD1BQ3KR37 738 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 NSMFQ6X4W1 530 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 C19orf47Q8N9M1 422 aaKnown RBP3.42□□□□□ -1.86
XRN1-210ENST00000472697 TMEM145Q8NBT3 493 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 CLRN3Q8NCR9 226 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 SNIP1Q8TAD8 396 aaKnown RBP3.42□□□□□ -1.86
XRN1-210ENST00000472697 FBXO41Q8TF61 875 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 CHMP4CQ96CF2 233 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 SMG9Q9H0W8 520 aaKnown RBP3.42□□□□□ -1.86
XRN1-210ENST00000472697 CNNM2Q9H8M5 875 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 DACH1Q9UI36 760 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 ZNF451Q9Y4E5 1061 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 ROBO2Q9HCK4 1378 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 CLASP1Q7Z460 1538 aa3.42□□□□□ -1.86
XRN1-210ENST00000472697 MSCO60682 206 aa3.41□□□□□ -1.86
XRN1-210ENST00000472697 AGR2O95994 175 aa3.41□□□□□ -1.86
XRN1-210ENST00000472697 MAOBP27338 520 aa3.41□□□□□ -1.86
XRN1-210ENST00000472697 PMLP29590 882 aa3.41□□□□□ -1.86
XRN1-210ENST00000472697 GSTM4Q03013 218 aa3.41□□□□□ -1.86
XRN1-210ENST00000472697 MRPL14Q6P1L8 145 aaKnown RBP3.41□□□□□ -1.86
XRN1-210ENST00000472697 CRIPAKQ8N1N5 446 aa3.41□□□□□ -1.86
XRN1-210ENST00000472697 PMEPA1Q969W9 287 aa3.41□□□□□ -1.86
XRN1-210ENST00000472697 NAA15Q9BXJ9 866 aaKnown RBP3.41□□□□□ -1.86
XRN1-210ENST00000472697 GPRC5CQ9NQ84 441 aa3.41□□□□□ -1.86
XRN1-210ENST00000472697 DISC1Q9NRI5 854 aa3.41□□□□□ -1.86
XRN1-210ENST00000472697 TJP2Q9UDY2 1190 aa3.41□□□□□ -1.86
XRN1-210ENST00000472697 TMEFF2Q9UIK5 374 aaPredicted RBP3.41□□□□□ -1.86
XRN1-210ENST00000472697 SERPINB13Q9UIV8 391 aa3.41□□□□□ -1.86
XRN1-210ENST00000472697 CYP8B1Q9UNU6 501 aa3.41□□□□□ -1.86
XRN1-210ENST00000472697 KIF13AQ9H1H9 1805 aa3.41□□□□□ -1.86
XRN1-210ENST00000472697 VAMP4O75379 141 aa3.41□□□□□ -1.86
XRN1-210ENST00000472697 F11P03951 625 aa3.41□□□□□ -1.86
XRN1-210ENST00000472697 IFIT2P09913 472 aaKnown RBP3.41□□□□□ -1.86
XRN1-210ENST00000472697 SLC5A1P13866 664 aa3.41□□□□□ -1.86
XRN1-210ENST00000472697 SOX18P35713 384 aa3.41□□□□□ -1.86
XRN1-210ENST00000472697 SCAND1P57086 179 aa3.41□□□□□ -1.86
XRN1-210ENST00000472697 NLRP12P59046 1061 aa3.41□□□□□ -1.86
XRN1-210ENST00000472697 GRB10Q13322 594 aa3.41□□□□□ -1.86
XRN1-210ENST00000472697 PPP2R5DQ14738 602 aa3.41□□□□□ -1.86
XRN1-210ENST00000472697 SLC4A8Q2Y0W8 1093 aa3.41□□□□□ -1.86
XRN1-210ENST00000472697 CFAP100Q494V2 611 aa3.41□□□□□ -1.86
XRN1-210ENST00000472697 ANO1Q5XXA6 986 aa3.41□□□□□ -1.86
XRN1-210ENST00000472697 HDGFL2Q7Z4V5 671 aaPredicted RBP3.41□□□□□ -1.86
XRN1-210ENST00000472697 ADAT2Q7Z6V5 191 aaKnown RBP3.41□□□□□ -1.86
XRN1-210ENST00000472697 LRRC47Q8N1G4 583 aaKnown RBP3.41□□□□□ -1.86
XRN1-210ENST00000472697 GTPBP3Q969Y2 492 aaKnown RBP3.41□□□□□ -1.86
XRN1-210ENST00000472697 C1orf159Q96HA4 380 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms