RNA–Protein interactions for RNA: ENST00000472696.1

EPHA4-212, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 531 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-212ENST00000472696 TTLL12Q14166 644 aaPredicted RBP6.81□□□□□ -1.32
EPHA4-212ENST00000472696 GRM4Q14833 912 aa6.81□□□□□ -1.32
EPHA4-212ENST00000472696 ME3Q16798 604 aa6.81□□□□□ -1.32
EPHA4-212ENST00000472696 BTNL9Q6UXG8 535 aa6.81□□□□□ -1.32
EPHA4-212ENST00000472696 FAM160B2Q86V87 743 aa6.81□□□□□ -1.32
EPHA4-212ENST00000472696 SIAH1Q8IUQ4 282 aa6.81□□□□□ -1.32
EPHA4-212ENST00000472696 CDAN1Q8IWY9 1227 aa6.81□□□□□ -1.32
EPHA4-212ENST00000472696 TRIM22Q8IYM9 498 aa6.81□□□□□ -1.32
EPHA4-212ENST00000472696 ZNF784Q8NCA9 323 aaPredicted RBP6.81□□□□□ -1.32
EPHA4-212ENST00000472696 ZNF526Q8TF50 670 aaPredicted RBP6.81□□□□□ -1.32
EPHA4-212ENST00000472696 GTF3C2Q8WUA4 911 aaPredicted RBP6.81□□□□□ -1.32
EPHA4-212ENST00000472696 CCDC102AQ96A19 550 aa6.81□□□□□ -1.32
EPHA4-212ENST00000472696 SLC10A4Q96EP9 437 aa6.81□□□□□ -1.32
EPHA4-212ENST00000472696 SPZ1Q9BXG8 430 aa6.81□□□□□ -1.32
EPHA4-212ENST00000472696 RNF26Q9BY78 433 aaPredicted RBP6.81□□□□□ -1.32
EPHA4-212ENST00000472696 BRPF3Q9ULD4 1205 aa6.81□□□□□ -1.32
EPHA4-212ENST00000472696 KCNH4Q9UQ05 1017 aa6.81□□□□□ -1.32
EPHA4-212ENST00000472696 SLC45A1Q9Y2W3 748 aa6.81□□□□□ -1.32
EPHA4-212ENST00000472696 TMEM88BA6NKF7 163 aa6.8□□□□□ -1.32
EPHA4-212ENST00000472696 NMT2O60551 498 aa6.8□□□□□ -1.32
EPHA4-212ENST00000472696 BMP3P12645 472 aa6.8□□□□□ -1.32
EPHA4-212ENST00000472696 HOXA7P31268 230 aaPredicted RBP6.8□□□□□ -1.32
EPHA4-212ENST00000472696 GTF2A2P52657 109 aa6.8□□□□□ -1.32
EPHA4-212ENST00000472696 AKAP17AQ02040 695 aaKnown RBP6.8□□□□□ -1.32
EPHA4-212ENST00000472696 ZNF543Q08ER8 600 aa6.8□□□□□ -1.32
EPHA4-212ENST00000472696 SCRN1Q12765 414 aa6.8□□□□□ -1.32
EPHA4-212ENST00000472696 RRP1BQ14684 758 aaKnown RBP6.8□□□□□ -1.32
EPHA4-212ENST00000472696 PRAMEF18Q5VWM3 479 aa6.8□□□□□ -1.32
EPHA4-212ENST00000472696 SLFN13Q68D06 897 aa6.8□□□□□ -1.32
EPHA4-212ENST00000472696 MICU3Q86XE3 530 aa6.8□□□□□ -1.32
EPHA4-212ENST00000472696 HS6ST3Q8IZP7 471 aa6.8□□□□□ -1.32
EPHA4-212ENST00000472696 SAMD3Q8N6K7 520 aa6.8□□□□□ -1.32
EPHA4-212ENST00000472696 PRPF38AQ8NAV1 312 aaKnown RBP6.8□□□□□ -1.32
EPHA4-212ENST00000472696 SMARCC2Q8TAQ2 1214 aa6.8□□□□□ -1.32
EPHA4-212ENST00000472696 NUP133Q8WUM0 1156 aa6.8□□□□□ -1.32
EPHA4-212ENST00000472696 ZKSCAN4Q969J2 545 aaPredicted RBP6.8□□□□□ -1.32
EPHA4-212ENST00000472696 TCEANC2Q96MN5 208 aa6.8□□□□□ -1.32
EPHA4-212ENST00000472696 FEZ1Q99689 392 aa6.8□□□□□ -1.32
EPHA4-212ENST00000472696 LRRC2Q9BYS8 371 aa6.8□□□□□ -1.32
EPHA4-212ENST00000472696 RNF39Q9H2S5 420 aa6.8□□□□□ -1.32
EPHA4-212ENST00000472696 RIOX1Q9H6W3 641 aa6.8□□□□□ -1.32
EPHA4-212ENST00000472696 TMOD4Q9NZQ9 345 aa6.8□□□□□ -1.32
EPHA4-212ENST00000472696 MAD2L2Q9UI95 211 aa6.8□□□□□ -1.32
EPHA4-212ENST00000472696 FEM1BQ9UK73 627 aa6.8□□□□□ -1.32
EPHA4-212ENST00000472696 CIZ1Q9ULV3 898 aaPredicted RBP6.8□□□□□ -1.32
EPHA4-212ENST00000472696 HPS5Q9UPZ3 1129 aa6.8□□□□□ -1.32
EPHA4-212ENST00000472696 SNCAIPQ9Y6H5 919 aa6.8□□□□□ -1.32
EPHA4-212ENST00000472696 TLL2Q9Y6L7 1015 aa6.8□□□□□ -1.32
EPHA4-212ENST00000472696 ZHX2Q9Y6X8 837 aa6.8□□□□□ -1.32
EPHA4-212ENST00000472696 PHIPQ8WWQ0 1821 aa6.8□□□□□ -1.32
EPHA4-212ENST00000472696 A0A0G2JLL6 359 aaPredicted RBP6.79□□□□□ -1.32
EPHA4-212ENST00000472696 A0A1W2PRG0 241 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 TESPA1A2RU30 521 aaPredicted RBP6.79□□□□□ -1.32
EPHA4-212ENST00000472696 USP17L15C9J2P7 530 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 USP17L13C9JLJ4 530 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 USP17L11C9JVI0 530 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 KLRF2D3W0D1 207 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 USP17L18D6R9N7 530 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 USP17L22D6RA61 530 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 USP17L17D6RBQ6 530 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 USP17L19D6RCP7 530 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 USP17L20D6RJB6 530 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 PRPF3O43395 683 aaKnown RBP6.79□□□□□ -1.32
EPHA4-212ENST00000472696 CD2BP2O95400 341 aaKnown RBP6.79□□□□□ -1.32
EPHA4-212ENST00000472696 DEXIO95424 95 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 NDUFB10O96000 172 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 STAT2P52630 851 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 OAZ1P54368 228 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 ATP2B2Q01814 1243 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 SSRP1Q08945 709 aaKnown RBP6.79□□□□□ -1.32
EPHA4-212ENST00000472696 USP17L24Q0WX57 530 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 SPP2Q13103 211 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 SNAPC2Q13487 334 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 NTRK3Q16288 839 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 CST9Q5W186 159 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 MCTP2Q6DN12 878 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 GALNT17Q6IS24 598 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 RGMBQ6NW40 437 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 LBX2Q6XYB7 198 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 TMTC3Q6ZXV5 915 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 PRRT2Q7Z6L0 340 aaPredicted RBP6.79□□□□□ -1.32
EPHA4-212ENST00000472696 SAPCD2Q86UD0 394 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 NKX2-3Q8TAU0 364 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 CCDC12Q8WUD4 166 aaPredicted RBP6.79□□□□□ -1.32
EPHA4-212ENST00000472696 GLT8D2Q9H1C3 349 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 SH3GLB2Q9NR46 395 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 WDR70Q9NW82 654 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 HOXC10Q9NYD6 342 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 PNMA3Q9UL41 463 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 SCAF8Q9UPN6 1271 aaKnown RBP6.79□□□□□ -1.32
EPHA4-212ENST00000472696 SMC3Q9UQE7 1217 aa6.79□□□□□ -1.32
EPHA4-212ENST00000472696 OTOFQ9HC10 1997 aa6.78□□□□□ -1.32
EPHA4-212ENST00000472696 MANSC4A6NHS7 340 aaPredicted RBP6.78□□□□□ -1.32
EPHA4-212ENST00000472696 TRAF5O00463 557 aa6.78□□□□□ -1.32
EPHA4-212ENST00000472696 IRF6O14896 467 aa6.78□□□□□ -1.32
EPHA4-212ENST00000472696 FMNL1O95466 1100 aaPredicted RBP6.78□□□□□ -1.32
EPHA4-212ENST00000472696 CETPP11597 493 aa6.78□□□□□ -1.32
EPHA4-212ENST00000472696 ADD1P35611 737 aaKnown RBP6.78□□□□□ -1.32
EPHA4-212ENST00000472696 ECE1P42892 770 aa6.78□□□□□ -1.32
EPHA4-212ENST00000472696 APLP1P51693 650 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms