RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 DBNDD2Q9BQY9 259 aa16.94■□□□□ 0.3
SMURF1-203ENST00000472627 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.94■□□□□ 0.32e-7■■□□□ 14.2
SMURF1-203ENST00000472627 PBX4Q9BYU1 374 aa16.94■□□□□ 0.3
SMURF1-203ENST00000472627 PRDM12Q9H4Q4 367 aa16.94■□□□□ 0.3
SMURF1-203ENST00000472627 ARHGEF10LQ9HCE6 1279 aa16.94■□□□□ 0.3
SMURF1-203ENST00000472627 HCN4Q9Y3Q4 1203 aa16.94■□□□□ 0.3
SMURF1-203ENST00000472627 APBB1O00213 710 aa16.93■□□□□ 0.3
SMURF1-203ENST00000472627 ACLYP53396 1101 aa16.93■□□□□ 0.3
SMURF1-203ENST00000472627 TMEM179Q6ZVK1 233 aa16.93■□□□□ 0.3
SMURF1-203ENST00000472627 MAGEB6Q8N7X4 407 aa16.93■□□□□ 0.3
SMURF1-203ENST00000472627 PIH1D3Q9NQM4 214 aaKnown RBP16.93■□□□□ 0.3
SMURF1-203ENST00000472627 A0A0G2JMZ2 1700 aa16.93■□□□□ 0.3
SMURF1-203ENST00000472627 IPO8O15397 1037 aaKnown RBP16.92■□□□□ 0.3
SMURF1-203ENST00000472627 SAMD1Q6SPF0 538 aaPredicted RBP16.92■□□□□ 0.3
SMURF1-203ENST00000472627 MSL3Q8N5Y2 521 aaKnown RBP16.92■□□□□ 0.3
SMURF1-203ENST00000472627 SPC25Q9HBM1 224 aa16.92■□□□□ 0.3
SMURF1-203ENST00000472627 WDR46O15213 610 aaKnown RBP16.91■□□□□ 0.3
SMURF1-203ENST00000472627 TLR3O15455 904 aaKnown RBP16.91■□□□□ 0.3
SMURF1-203ENST00000472627 GUCY1A2P33402 732 aa16.91■□□□□ 0.3
SMURF1-203ENST00000472627 CCDC85BQ15834 202 aaPredicted RBP16.91■□□□□ 0.3
SMURF1-203ENST00000472627 PCSK9Q8NBP7 692 aaKnown RBP16.91■□□□□ 0.3
SMURF1-203ENST00000472627 ATG4CQ96DT6 458 aa16.91■□□□□ 0.3
SMURF1-203ENST00000472627 SLC28A3Q9HAS3 691 aa16.91■□□□□ 0.3
SMURF1-203ENST00000472627 TBX21Q9UL17 535 aa16.91■□□□□ 0.3
SMURF1-203ENST00000472627 FAM184BQ9ULE4 1060 aa16.91■□□□□ 0.3
SMURF1-203ENST00000472627 ARIH1Q9Y4X5 557 aaPredicted RBP16.91■□□□□ 0.3
SMURF1-203ENST00000472627 ELP1O95163 1332 aa16.91■□□□□ 0.3
SMURF1-203ENST00000472627 PNMA6EA0A0J9YXQ4 647 aa16.9■□□□□ 0.3
SMURF1-203ENST00000472627 A0A1W2PRG0 241 aa16.9■□□□□ 0.3
SMURF1-203ENST00000472627 ADAMTS4O75173 837 aa16.9■□□□□ 0.3
SMURF1-203ENST00000472627 PLCD1P51178 756 aa16.9■□□□□ 0.3
SMURF1-203ENST00000472627 TMEM240Q5SV17 173 aa16.9■□□□□ 0.3
SMURF1-203ENST00000472627 VTI1AQ96AJ9 217 aa16.9■□□□□ 0.3
SMURF1-203ENST00000472627 CRNKL1Q9BZJ0 848 aaKnown RBP16.9■□□□□ 0.3
SMURF1-203ENST00000472627 SWAP70Q9UH65 585 aa16.9■□□□□ 0.3
SMURF1-203ENST00000472627 SYNRGQ9UMZ2 1314 aa16.9■□□□□ 0.3
SMURF1-203ENST00000472627 PGK2P07205 417 aa16.89■□□□□ 0.29
SMURF1-203ENST00000472627 ZNF865P0CJ78 1059 aaPredicted RBP16.89■□□□□ 0.29
SMURF1-203ENST00000472627 HOXD11P31277 338 aaPredicted RBP16.89■□□□□ 0.29
SMURF1-203ENST00000472627 PBX2P40425 430 aa16.89■□□□□ 0.29
SMURF1-203ENST00000472627 ICA1Q05084 483 aa16.89■□□□□ 0.29
SMURF1-203ENST00000472627 RIOX2Q8IUF8 465 aa16.89■□□□□ 0.29
SMURF1-203ENST00000472627 VCPKMTQ9H867 229 aa16.89■□□□□ 0.29
SMURF1-203ENST00000472627 MCM9Q9NXL9 1143 aa16.89■□□□□ 0.29
SMURF1-203ENST00000472627 CXXC1Q9P0U4 656 aaPredicted RBP16.89■□□□□ 0.29
SMURF1-203ENST00000472627 NCOR1O75376 2440 aa16.88■□□□□ 0.29
SMURF1-203ENST00000472627 MAGEB6P1A0A0J9YX57 407 aa16.88■□□□□ 0.29
SMURF1-203ENST00000472627 STAT3P40763 770 aa16.88■□□□□ 0.29
SMURF1-203ENST00000472627 GABPAQ06546 454 aa16.88■□□□□ 0.29
SMURF1-203ENST00000472627 TMEM132BQ14DG7 1078 aa16.88■□□□□ 0.29
SMURF1-203ENST00000472627 KCNA10Q16322 511 aa16.88■□□□□ 0.29
SMURF1-203ENST00000472627 ZNF792Q3KQV3 632 aa16.88■□□□□ 0.29
SMURF1-203ENST00000472627 RASIP1Q5U651 963 aa16.88■□□□□ 0.29
SMURF1-203ENST00000472627 SPICE1Q8N0Z3 855 aa16.88■□□□□ 0.29
SMURF1-203ENST00000472627 TMX2Q9Y320 296 aa16.88■□□□□ 0.29
SMURF1-203ENST00000472627 SYNGAP1Q96PV0 1343 aa16.88■□□□□ 0.29
SMURF1-203ENST00000472627 A0A0U1RQG5 324 aaPredicted RBP16.87■□□□□ 0.29
SMURF1-203ENST00000472627 GRXCR1A8MXD5 290 aa16.87■□□□□ 0.29
SMURF1-203ENST00000472627 DUSP11O75319 330 aaKnown RBP16.87■□□□□ 0.29
SMURF1-203ENST00000472627 SURF6O75683 361 aaKnown RBP16.87■□□□□ 0.29
SMURF1-203ENST00000472627 CSF2RAP15509 400 aa16.87■□□□□ 0.29
SMURF1-203ENST00000472627 ZNF365Q70YC5 407 aa16.87■□□□□ 0.29
SMURF1-203ENST00000472627 AMOTL1Q8IY63 956 aa16.87■□□□□ 0.29
SMURF1-203ENST00000472627 KLHDC9Q8NEP7 349 aa16.87■□□□□ 0.29
SMURF1-203ENST00000472627 CDCA7LQ96GN5 454 aa16.87■□□□□ 0.29
SMURF1-203ENST00000472627 DBNLQ9UJU6 430 aaKnown RBP16.87■□□□□ 0.29
SMURF1-203ENST00000472627 ZHX1Q9UKY1 873 aaPredicted RBP16.87■□□□□ 0.29
SMURF1-203ENST00000472627 C6orf222P0C671 652 aaPredicted RBP16.86■□□□□ 0.29
SMURF1-203ENST00000472627 TAL1P17542 331 aaPredicted RBP16.86■□□□□ 0.29
SMURF1-203ENST00000472627 CST5P28325 142 aaPredicted RBP16.86■□□□□ 0.29
SMURF1-203ENST00000472627 ADGRE1Q14246 886 aa16.86■□□□□ 0.29
SMURF1-203ENST00000472627 TTF1Q15361 905 aaPredicted RBP16.86■□□□□ 0.29
SMURF1-203ENST00000472627 SKIV2LQ15477 1246 aaKnown RBP16.86■□□□□ 0.29
SMURF1-203ENST00000472627 HERVK_113Q902F9 699 aa16.86■□□□□ 0.29
SMURF1-203ENST00000472627 LENG1Q96BZ8 264 aaPredicted RBP16.86■□□□□ 0.29
SMURF1-203ENST00000472627 DDX11Q96FC9 970 aa16.86■□□□□ 0.29
SMURF1-203ENST00000472627 CCDC17Q96LX7 622 aa16.86■□□□□ 0.29
SMURF1-203ENST00000472627 PPP1R12CQ9BZL4 782 aa16.86■□□□□ 0.29
SMURF1-203ENST00000472627 GOPCQ9HD26 462 aa16.86■□□□□ 0.29
SMURF1-203ENST00000472627 IL23AQ9NPF7 189 aa16.86■□□□□ 0.29
SMURF1-203ENST00000472627 NAV1Q8NEY1 1877 aa16.85■□□□□ 0.29
SMURF1-203ENST00000472627 ARVCFO00192 962 aa16.85■□□□□ 0.29
SMURF1-203ENST00000472627 FGBP02675 491 aa16.85■□□□□ 0.29
SMURF1-203ENST00000472627 ACRP10323 421 aa16.85■□□□□ 0.29
SMURF1-203ENST00000472627 RARSP54136 660 aaKnown RBP16.85■□□□□ 0.29
SMURF1-203ENST00000472627 MICALL1Q8N3F8 863 aa16.85■□□□□ 0.29
SMURF1-203ENST00000472627 RIOK1Q9BRS2 568 aaKnown RBP16.85■□□□□ 0.29
SMURF1-203ENST00000472627 NKX2-4Q9H2Z4 354 aa16.85■□□□□ 0.29
SMURF1-203ENST00000472627 BDP1A6H8Y1 2624 aa16.84■□□□□ 0.29
SMURF1-203ENST00000472627 PLXNA1Q9UIW2 1896 aa16.84■□□□□ 0.29
SMURF1-203ENST00000472627 SMCHD1A6NHR9 2005 aa16.84■□□□□ 0.29
SMURF1-203ENST00000472627 GTPBP6O43824 516 aaPredicted RBP16.84■□□□□ 0.29
SMURF1-203ENST00000472627 ASGR1P07306 291 aa16.84■□□□□ 0.29
SMURF1-203ENST00000472627 CDK7P50613 346 aa16.84■□□□□ 0.29
SMURF1-203ENST00000472627 POLA2Q14181 598 aa16.84■□□□□ 0.29
SMURF1-203ENST00000472627 PPP2R2DQ66LE6 453 aa16.84■□□□□ 0.29
SMURF1-203ENST00000472627 C16orf59Q7L2K0 433 aa16.84■□□□□ 0.29
SMURF1-203ENST00000472627 TRMT2AQ8IZ69 625 aaKnown RBP16.84■□□□□ 0.29
SMURF1-203ENST00000472627 ADAMTS5Q9UNA0 930 aa16.84■□□□□ 0.29
SMURF1-203ENST00000472627 VWA5AO00534 786 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms