RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 SMC1BQ8NDV3 1235 aa9.57□□□□□ -0.88
SCAF4-205ENST00000472318 GIMAP7Q8NHV1 300 aa9.57□□□□□ -0.88
SCAF4-205ENST00000472318 ABHD8Q96I13 439 aa9.57□□□□□ -0.88
SCAF4-205ENST00000472318 YIPF2Q9BWQ6 316 aa9.57□□□□□ -0.88
SCAF4-205ENST00000472318 CPSF1Q10570 1443 aaKnown RBP9.56□□□□□ -0.88
SCAF4-205ENST00000472318 KCPQ6ZWJ8 1503 aa9.56□□□□□ -0.88
SCAF4-205ENST00000472318 TRPM1Q7Z4N2 1603 aa9.56□□□□□ -0.88
SCAF4-205ENST00000472318 TMEM238LA0A1B0GVL6 79 aa9.56□□□□□ -0.88
SCAF4-205ENST00000472318 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.56□□□□□ -0.88
SCAF4-205ENST00000472318 GADD45BO75293 160 aaPredicted RBP9.56□□□□□ -0.88
SCAF4-205ENST00000472318 RGS19P49795 217 aa9.56□□□□□ -0.88
SCAF4-205ENST00000472318 GP2P55259 537 aaKnown RBP9.56□□□□□ -0.88
SCAF4-205ENST00000472318 KCNA1Q09470 495 aa9.56□□□□□ -0.88
SCAF4-205ENST00000472318 AP3B2Q13367 1082 aa9.56□□□□□ -0.88
SCAF4-205ENST00000472318 NFKBIBQ15653 356 aa9.56□□□□□ -0.88
SCAF4-205ENST00000472318 C9orf131Q5VYM1 1079 aa9.56□□□□□ -0.88
SCAF4-205ENST00000472318 MCTP1Q6DN14 999 aa9.56□□□□□ -0.88
SCAF4-205ENST00000472318 ARHGAP27Q6ZUM4 889 aa9.56□□□□□ -0.88
SCAF4-205ENST00000472318 TMC7Q7Z402 723 aa9.56□□□□□ -0.88
SCAF4-205ENST00000472318 FAM177A1Q8N128 213 aaPredicted RBP9.56□□□□□ -0.88
SCAF4-205ENST00000472318 FBXL6Q8N531 539 aa9.56□□□□□ -0.88
SCAF4-205ENST00000472318 GSX1Q9H4S2 264 aaPredicted RBP9.56□□□□□ -0.88
SCAF4-205ENST00000472318 CCNL1Q9UK58 526 aaPredicted RBP9.56□□□□□ -0.88
SCAF4-205ENST00000472318 NSD2O96028 1365 aa9.55□□□□□ -0.88
SCAF4-205ENST00000472318 BRD1O95696 1058 aa9.55□□□□□ -0.88
SCAF4-205ENST00000472318 HOXA10P31260 410 aaPredicted RBP9.55□□□□□ -0.88
SCAF4-205ENST00000472318 AMIGO3Q86WK7 504 aa9.55□□□□□ -0.88
SCAF4-205ENST00000472318 PRKAG2Q9UGJ0 569 aa9.55□□□□□ -0.88
SCAF4-205ENST00000472318 DCTN4Q9UJW0 460 aa9.55□□□□□ -0.88
SCAF4-205ENST00000472318 OAS3Q9Y6K5 1087 aaKnown RBP9.55□□□□□ -0.88
SCAF4-205ENST00000472318 C10orf71Q711Q0 1435 aa9.55□□□□□ -0.88
SCAF4-205ENST00000472318 SYNGAP1Q96PV0 1343 aa9.55□□□□□ -0.88
SCAF4-205ENST00000472318 TNRC18O15417 2968 aaPredicted RBP9.54□□□□□ -0.88
SCAF4-205ENST00000472318 IL2RBP14784 551 aa9.54□□□□□ -0.88
SCAF4-205ENST00000472318 FAAP100Q0VG06 881 aa9.54□□□□□ -0.88
SCAF4-205ENST00000472318 AKAP4Q5JQC9 854 aa9.54□□□□□ -0.88
SCAF4-205ENST00000472318 ZAR1Q86SH2 424 aa9.54□□□□□ -0.88
SCAF4-205ENST00000472318 SHISA5Q8N114 240 aa9.54□□□□□ -0.88
SCAF4-205ENST00000472318 EPS8L3Q8TE67 593 aaKnown RBP9.54□□□□□ -0.88
SCAF4-205ENST00000472318 GATA6Q92908 595 aa9.54□□□□□ -0.88
SCAF4-205ENST00000472318 SYTL4Q96C24 671 aaPredicted RBP9.54□□□□□ -0.88
SCAF4-205ENST00000472318 METTL22Q9BUU2 404 aaPredicted RBP9.54□□□□□ -0.88
SCAF4-205ENST00000472318 SEMA6CQ9H3T2 930 aa9.54□□□□□ -0.88
SCAF4-205ENST00000472318 ACSS3Q9H6R3 686 aa9.54□□□□□ -0.88
SCAF4-205ENST00000472318 ATG3Q9NT62 314 aa9.54□□□□□ -0.88
SCAF4-205ENST00000472318 FAM105AQ9NUU6 356 aa9.54□□□□□ -0.88
SCAF4-205ENST00000472318 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.53□□□□□ -0.88
SCAF4-205ENST00000472318 FOSL1P15407 271 aa9.53□□□□□ -0.88
SCAF4-205ENST00000472318 MSMPQ1L6U9 139 aa9.53□□□□□ -0.88
SCAF4-205ENST00000472318 WDR18Q9BV38 432 aa9.53□□□□□ -0.88
SCAF4-205ENST00000472318 OSBPL1AQ9BXW6 950 aa9.53□□□□□ -0.88
SCAF4-205ENST00000472318 LEMD3Q9Y2U8 911 aa9.53□□□□□ -0.88
SCAF4-205ENST00000472318 ITSN1Q15811 1721 aa9.53□□□□□ -0.88
SCAF4-205ENST00000472318 KDM2BQ8NHM5 1336 aa9.53□□□□□ -0.88
SCAF4-205ENST00000472318 PXDNLA1KZ92 1463 aa9.53□□□□□ -0.88
SCAF4-205ENST00000472318 AOC2O75106 756 aa9.52□□□□□ -0.89
SCAF4-205ENST00000472318 RAB6AP20340 208 aa9.52□□□□□ -0.89
SCAF4-205ENST00000472318 ADMP35318 185 aa9.52□□□□□ -0.89
SCAF4-205ENST00000472318 CCDC27Q2M243 656 aa9.52□□□□□ -0.89
SCAF4-205ENST00000472318 TBC1D32Q96NH3 1257 aa9.52□□□□□ -0.89
SCAF4-205ENST00000472318 RAD18Q9NS91 495 aa9.52□□□□□ -0.89
SCAF4-205ENST00000472318 AP4E1Q9UPM8 1137 aa9.52□□□□□ -0.89
SCAF4-205ENST00000472318 PLEKHG2Q9H7P9 1386 aa9.51□□□□□ -0.89
SCAF4-205ENST00000472318 A0A0G2JLW4 131 aa9.51□□□□□ -0.89
SCAF4-205ENST00000472318 KRTAP9-6A0A140TA67 174 aa9.51□□□□□ -0.89
SCAF4-205ENST00000472318 CCDC85CA6NKD9 419 aa9.51□□□□□ -0.89
SCAF4-205ENST00000472318 CTCFP49711 727 aaPredicted RBP9.51□□□□□ -0.89
SCAF4-205ENST00000472318 LBX1P52954 281 aa9.51□□□□□ -0.89
SCAF4-205ENST00000472318 MAP7Q14244 749 aa9.51□□□□□ -0.89
SCAF4-205ENST00000472318 PDE3AQ14432 1141 aa9.51□□□□□ -0.89
SCAF4-205ENST00000472318 DYMQ7RTS9 669 aa9.51□□□□□ -0.89
SCAF4-205ENST00000472318 NLRP2Q9NX02 1062 aa9.51□□□□□ -0.89
SCAF4-205ENST00000472318 BIN2Q9UBW5 565 aaPredicted RBP9.51□□□□□ -0.89
SCAF4-205ENST00000472318 ANKRD36BQ8N2N9 1353 aa9.5□□□□□ -0.89
SCAF4-205ENST00000472318 WNT11O96014 354 aa9.5□□□□□ -0.89
SCAF4-205ENST00000472318 NFICP08651 508 aa9.5□□□□□ -0.89
SCAF4-205ENST00000472318 DSC3Q14574 896 aa9.5□□□□□ -0.89
SCAF4-205ENST00000472318 PI16Q6UXB8 463 aa9.5□□□□□ -0.89
SCAF4-205ENST00000472318 FLAD1Q8NFF5 587 aa9.5□□□□□ -0.89
SCAF4-205ENST00000472318 KIAA1210Q9ULL0 1709 aa9.5□□□□□ -0.89
SCAF4-205ENST00000472318 TREHO43280 583 aa9.49□□□□□ -0.89
SCAF4-205ENST00000472318 IRAK1P51617 712 aa9.49□□□□□ -0.89
SCAF4-205ENST00000472318 POLR3GLQ9BT43 218 aa9.49□□□□□ -0.89
SCAF4-205ENST00000472318 RNF181Q9P0P0 153 aa9.49□□□□□ -0.89
SCAF4-205ENST00000472318 FAM170BA6NMN3 283 aa9.48□□□□□ -0.89
SCAF4-205ENST00000472318 PRNPP04156 253 aa9.48□□□□□ -0.89
SCAF4-205ENST00000472318 XRCC5P13010 732 aaKnown RBP9.48□□□□□ -0.89
SCAF4-205ENST00000472318 ASPAP45381 313 aa9.48□□□□□ -0.89
SCAF4-205ENST00000472318 ENOX2Q16206 610 aaKnown RBP9.48□□□□□ -0.89
SCAF4-205ENST00000472318 SEZ6L2Q6UXD5 910 aa9.48□□□□□ -0.89
SCAF4-205ENST00000472318 DTHD1Q6ZMT9 781 aa9.48□□□□□ -0.89
SCAF4-205ENST00000472318 CCDC86Q9H6F5 360 aaKnown RBP9.48□□□□□ -0.89
SCAF4-205ENST00000472318 PPP1R9AQ9ULJ8 1098 aa9.48□□□□□ -0.89
SCAF4-205ENST00000472318 LY75O60449 1722 aa9.48□□□□□ -0.89
SCAF4-205ENST00000472318 TMPRSS2O15393 492 aa9.47□□□□□ -0.89
SCAF4-205ENST00000472318 GSTP1P09211 210 aaKnown RBP9.47□□□□□ -0.89
SCAF4-205ENST00000472318 HSPA8P11142 646 aaKnown RBP9.47□□□□□ -0.89
SCAF4-205ENST00000472318 DPEP1P16444 411 aa9.47□□□□□ -0.89
SCAF4-205ENST00000472318 ZNF157P51786 506 aaPredicted RBP9.47□□□□□ -0.89
SCAF4-205ENST00000472318 FCGRTP55899 365 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms