RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, humanhuman

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS18B-208ENST00000472267 HOMER1Q86YM7 354 aa12.41□□□□□ -0.42
MRPS18B-208ENST00000472267 OXER1Q8TDS5 423 aa12.41□□□□□ -0.42
MRPS18B-208ENST00000472267 GPKOWQ92917 476 aaPredicted RBP eCLIP12.41□□□□□ -0.42
MRPS18B-208ENST00000472267 CLIC4Q9Y696 253 aa12.41□□□□□ -0.42
MRPS18B-208ENST00000472267 TBC1D12O60347 775 aa12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 ELP1O95163 1332 aa12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 KCNA4P22459 653 aa12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 U2AF2P26368 475 aaKnown RBP eCLIP12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 KRT2P35908 639 aa12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 NLRP5P59047 1200 aa12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 NR5A1Q13285 461 aa12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 GPR162Q16538 588 aa12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 ANGEL2Q5VTE6 544 aaKnown RBP12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 SLFN13Q68D06 897 aa12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 HEATR3Q7Z4Q2 680 aa12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 NOSTRINQ8IVI9 506 aa12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 CNKSR2Q8WXI2 1034 aa12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 RRP36Q96EU6 259 aaKnown RBP12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 PHF20Q9BVI0 1012 aa12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 SPZ1Q9BXG8 430 aa12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 BRMS1Q9HCU9 246 aa12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 PGAP2Q9UHJ9 254 aa12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 SNHG28P0DPA3 235 aa12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 ZNF543Q08ER8 600 aa12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 STK38Q15208 465 aa12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 TTBK2Q6IQ55 1244 aa12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 KCTD1Q719H9 257 aa12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 SIAH1Q8IUQ4 282 aa12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 MKL1Q969V6 931 aa12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 DEFB129Q9H1M3 183 aa12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 FOXP1Q9H334 677 aaPredicted RBP12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 RTEL1Q9NZ71 1219 aa12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 SEC63Q9UGP8 760 aaKnown RBP12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 RCOR1Q9UKL0 485 aa12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 ZBTB21Q9ULJ3 1066 aa12.4□□□□□ -0.42
MRPS18B-208ENST00000472267 LMOD1P29536 600 aaPredicted RBP12.39□□□□□ -0.43
MRPS18B-208ENST00000472267 SLC16A2P36021 539 aa12.39□□□□□ -0.43
MRPS18B-208ENST00000472267 SLC1A4P43007 532 aa12.39□□□□□ -0.43
MRPS18B-208ENST00000472267 SF3A1Q15459 793 aaKnown RBP12.39□□□□□ -0.43
MRPS18B-208ENST00000472267 ANO1Q5XXA6 986 aa12.39□□□□□ -0.43
MRPS18B-208ENST00000472267 WWC2Q6AWC2 1192 aa12.39□□□□□ -0.43
MRPS18B-208ENST00000472267 TEPSINQ96N21 525 aa12.39□□□□□ -0.43
MRPS18B-208ENST00000472267 PIGSQ96S52 555 aa12.39□□□□□ -0.43
MRPS18B-208ENST00000472267 ARHGEF10LQ9HCE6 1279 aa12.39□□□□□ -0.43
MRPS18B-208ENST00000472267 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.39□□□□□ -0.43
MRPS18B-208ENST00000472267 ATP2B1P20020 1258 aa12.38□□□□□ -0.43
MRPS18B-208ENST00000472267 SMARCA1P28370 1054 aa12.38□□□□□ -0.43
MRPS18B-208ENST00000472267 CAP2P40123 477 aa12.38□□□□□ -0.43
MRPS18B-208ENST00000472267 ME1P48163 572 aa12.38□□□□□ -0.43
MRPS18B-208ENST00000472267 GPATCH4Q5T3I0 446 aaKnown RBP12.38□□□□□ -0.43
MRPS18B-208ENST00000472267 NBPF12Q5TAG4 269 aaPredicted RBP12.38□□□□□ -0.43
MRPS18B-208ENST00000472267 PRAMEF18Q5VWM3 479 aa12.38□□□□□ -0.43
MRPS18B-208ENST00000472267 APOBEC3FQ8IUX4 373 aaKnown RBP12.38□□□□□ -0.43
MRPS18B-208ENST00000472267 BICD2Q8TD16 824 aa12.38□□□□□ -0.43
MRPS18B-208ENST00000472267 DCAF4Q8WV16 495 aa12.38□□□□□ -0.43
MRPS18B-208ENST00000472267 PGBD1Q96JS3 809 aa12.38□□□□□ -0.43
MRPS18B-208ENST00000472267 RIOX1Q9H6W3 641 aa12.38□□□□□ -0.43
MRPS18B-208ENST00000472267 SH3GLB2Q9NR46 395 aa12.38□□□□□ -0.43
MRPS18B-208ENST00000472267 GGA3Q9NZ52 723 aa12.38□□□□□ -0.43
MRPS18B-208ENST00000472267 TMEM63CQ9P1W3 806 aa12.38□□□□□ -0.43
MRPS18B-208ENST00000472267 A0A1W2PRG0 241 aa12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 F5H6K3 240 aa12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 STXBP3O00186 592 aa12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 NDUFB10O96000 172 aa12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 ECE1P42892 770 aa12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 HIRAP54198 1017 aaPredicted RBP12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 NAPAP54920 295 aa12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 KLRC3Q07444 240 aa12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 ADGRF4Q8IZF3 695 aa12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 LINC00301Q8NCQ3 95 aa12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 ACER1Q8TDN7 264 aa12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 SYAP1Q96A49 352 aaPredicted RBP12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 NUP88Q99567 741 aaPredicted RBP12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 POLR3EQ9NVU0 708 aa12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 ATAD5Q96QE3 1844 aa12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 FAM205CA6NFA0 338 aa12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 SPTLC2O15270 562 aa12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 YEATS4O95619 227 aa12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 CALML3P27482 149 aa12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 NASPP49321 788 aaPredicted RBP12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 MAP3K10Q02779 954 aa12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 IKQ13123 557 aaPredicted RBP12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 MAPK8IP2Q13387 824 aaPredicted RBP12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 NPY5RQ15761 445 aa12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 ZSCAN23Q3MJ62 389 aa12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 TYW1BQ6NUM6 668 aa12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 CCDC84Q86UT8 332 aaPredicted RBP12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 BLIDQ8IZY5 108 aa12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 SPICE1Q8N0Z3 855 aa12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 GMCL1P1Q8NEA9 526 aa12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 CCDC148Q8NFR7 591 aa12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 JMJD4Q9H9V9 463 aa12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 BARHL2Q9NY43 387 aa12.37□□□□□ -0.43
MRPS18B-208ENST00000472267 POLR2AP24928 1970 aaKnown RBP12.36□□□□□ -0.43
MRPS18B-208ENST00000472267 PHF20L1A8MW92 1017 aa12.36□□□□□ -0.43
MRPS18B-208ENST00000472267 USP17L10C9JJH3 530 aa12.36□□□□□ -0.43
MRPS18B-208ENST00000472267 ADAMTS3O15072 1205 aa12.36□□□□□ -0.43
MRPS18B-208ENST00000472267 LIG1P18858 919 aa12.36□□□□□ -0.43
MRPS18B-208ENST00000472267 MARCKSP29966 332 aaPredicted RBP12.36□□□□□ -0.43
MRPS18B-208ENST00000472267 TOB1P50616 345 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms