RNA–Protein interactions for RNA: ENST00000472040.1

GREB1-209, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 5

Gene GREB1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-209ENST00000472040 SNAPC2Q13487 334 aa17.07■□□□□ 0.32
GREB1-209ENST00000472040 MTMR2Q13614 643 aa17.07■□□□□ 0.32
GREB1-209ENST00000472040 LARP6Q9BRS8 491 aaKnown RBP17.07■□□□□ 0.32
GREB1-209ENST00000472040 CREBZFQ9NS37 354 aa17.07■□□□□ 0.32
GREB1-209ENST00000472040 EMILIN3Q9NT22 766 aa17.07■□□□□ 0.32
GREB1-209ENST00000472040 NAP1L2Q9ULW6 460 aaPredicted RBP17.07■□□□□ 0.32
GREB1-209ENST00000472040 CPLX1O14810 134 aa17.06■□□□□ 0.32
GREB1-209ENST00000472040 LARGE1O95461 756 aa17.06■□□□□ 0.32
GREB1-209ENST00000472040 FDX1P10109 184 aa17.06■□□□□ 0.32
GREB1-209ENST00000472040 PDIA4P13667 645 aaKnown RBP17.06■□□□□ 0.32
GREB1-209ENST00000472040 CDC27P30260 824 aa17.06■□□□□ 0.32
GREB1-209ENST00000472040 NTRK3Q16288 839 aa17.06■□□□□ 0.32
GREB1-209ENST00000472040 SPRYD7Q5W111 196 aa17.06■□□□□ 0.32
GREB1-209ENST00000472040 TMTC3Q6ZXV5 915 aa17.06■□□□□ 0.32
GREB1-209ENST00000472040 NOL8Q76FK4 1167 aaKnown RBP17.06■□□□□ 0.32
GREB1-209ENST00000472040 FAM160B2Q86V87 743 aa17.06■□□□□ 0.32
GREB1-209ENST00000472040 RGS22Q8NE09 1264 aa17.06■□□□□ 0.32
GREB1-209ENST00000472040 CHURC1Q8WUH1 139 aa17.06■□□□□ 0.32
GREB1-209ENST00000472040 OTUD5Q96G74 571 aa17.06■□□□□ 0.32
GREB1-209ENST00000472040 MYL10Q9BUA6 226 aa17.06■□□□□ 0.32
GREB1-209ENST00000472040 SPZ1Q9BXG8 430 aa17.06■□□□□ 0.32
GREB1-209ENST00000472040 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.06■□□□□ 0.32
GREB1-209ENST00000472040 FEM1BQ9UK73 627 aa17.06■□□□□ 0.32
GREB1-209ENST00000472040 TRIM75PA6NK02 468 aa17.05■□□□□ 0.32
GREB1-209ENST00000472040 KLRF2D3W0D1 207 aa17.05■□□□□ 0.32
GREB1-209ENST00000472040 CETPP11597 493 aa17.05■□□□□ 0.32
GREB1-209ENST00000472040 HOXA7P31268 230 aaPredicted RBP17.05■□□□□ 0.32
GREB1-209ENST00000472040 ADD1P35611 737 aaKnown RBP17.05■□□□□ 0.32
GREB1-209ENST00000472040 INHBEP58166 350 aa17.05■□□□□ 0.32
GREB1-209ENST00000472040 CCT2P78371 535 aaKnown RBP17.05■□□□□ 0.32
GREB1-209ENST00000472040 HMGN5P82970 282 aaKnown RBP17.05■□□□□ 0.32
GREB1-209ENST00000472040 STK3Q13188 491 aa17.05■□□□□ 0.32
GREB1-209ENST00000472040 CCDC84Q86UT8 332 aaPredicted RBP17.05■□□□□ 0.32
GREB1-209ENST00000472040 SMARCC2Q8TAQ2 1214 aa17.05■□□□□ 0.32
GREB1-209ENST00000472040 RNF26Q9BY78 433 aaPredicted RBP17.05■□□□□ 0.32
GREB1-209ENST00000472040 RIOX1Q9H6W3 641 aa17.05■□□□□ 0.32
GREB1-209ENST00000472040 SLC45A1Q9Y2W3 748 aa17.05■□□□□ 0.32
GREB1-209ENST00000472040 MYPNQ86TC9 1320 aa17.04■□□□□ 0.32
GREB1-209ENST00000472040 STK36Q9NRP7 1315 aa17.04■□□□□ 0.32
GREB1-209ENST00000472040 TESPA1A2RU30 521 aaPredicted RBP17.04■□□□□ 0.32
GREB1-209ENST00000472040 ZNF157P51786 506 aaPredicted RBP17.04■□□□□ 0.32
GREB1-209ENST00000472040 FUT2Q10981 343 aa17.04■□□□□ 0.32
GREB1-209ENST00000472040 PABPC4Q13310 644 aaKnown RBP eCLIP17.04■□□□□ 0.32
GREB1-209ENST00000472040 CCDC83Q8IWF9 413 aa17.04■□□□□ 0.32
GREB1-209ENST00000472040 FAM177A1Q8N128 213 aaPredicted RBP17.04■□□□□ 0.32
GREB1-209ENST00000472040 NECAB1Q8N987 351 aa17.04■□□□□ 0.32
GREB1-209ENST00000472040 IPO9Q96P70 1041 aaKnown RBP17.04■□□□□ 0.32
GREB1-209ENST00000472040 CWC22Q9HCG8 908 aaKnown RBP17.04■□□□□ 0.32
GREB1-209ENST00000472040 DAXXQ9UER7 740 aaPredicted RBP17.04■□□□□ 0.32
GREB1-209ENST00000472040 KIF3AQ9Y496 699 aa17.04■□□□□ 0.32
GREB1-209ENST00000472040 RASSF10A6NK89 507 aa17.03■□□□□ 0.32
GREB1-209ENST00000472040 USP17L15C9J2P7 530 aa17.03■□□□□ 0.32
GREB1-209ENST00000472040 USP17L13C9JLJ4 530 aa17.03■□□□□ 0.32
GREB1-209ENST00000472040 USP17L11C9JVI0 530 aa17.03■□□□□ 0.32
GREB1-209ENST00000472040 USP17L18D6R9N7 530 aa17.03■□□□□ 0.32
GREB1-209ENST00000472040 USP17L22D6RA61 530 aa17.03■□□□□ 0.32
GREB1-209ENST00000472040 USP17L17D6RBQ6 530 aa17.03■□□□□ 0.32
GREB1-209ENST00000472040 USP17L19D6RCP7 530 aa17.03■□□□□ 0.32
GREB1-209ENST00000472040 USP17L20D6RJB6 530 aa17.03■□□□□ 0.32
GREB1-209ENST00000472040 PRPF3O43395 683 aaKnown RBP17.03■□□□□ 0.32
GREB1-209ENST00000472040 SLC10A3P09131 477 aa17.03■□□□□ 0.32
GREB1-209ENST00000472040 VCAM1P19320 739 aa17.03■□□□□ 0.32
GREB1-209ENST00000472040 RXRAP19793 462 aa17.03■□□□□ 0.32
GREB1-209ENST00000472040 GJA5P36382 358 aa17.03■□□□□ 0.32
GREB1-209ENST00000472040 STAT2P52630 851 aa17.03■□□□□ 0.32
GREB1-209ENST00000472040 HMGCS2P54868 508 aa17.03■□□□□ 0.32
GREB1-209ENST00000472040 USP17L24Q0WX57 530 aa17.03■□□□□ 0.32
GREB1-209ENST00000472040 ST3GAL1Q11201 340 aa17.03■□□□□ 0.32
GREB1-209ENST00000472040 CCDC96Q2M329 555 aa17.03■□□□□ 0.32
GREB1-209ENST00000472040 KIAA1755Q5JYT7 1200 aa17.03■□□□□ 0.32
GREB1-209ENST00000472040 CATSPERGQ6ZRH7 1159 aa17.03■□□□□ 0.32
GREB1-209ENST00000472040 RASAL3Q86YV0 1011 aa17.03■□□□□ 0.32
GREB1-209ENST00000472040 REM2Q8IYK8 340 aaPredicted RBP17.03■□□□□ 0.32
GREB1-209ENST00000472040 TRIM22Q8IYM9 498 aa17.03■□□□□ 0.32
GREB1-209ENST00000472040 STAG2Q8N3U4 1231 aa17.03■□□□□ 0.32
GREB1-209ENST00000472040 CNKSR2Q8WXI2 1034 aa17.03■□□□□ 0.32
GREB1-209ENST00000472040 MS4A4AQ96JQ5 239 aa17.03■□□□□ 0.32
GREB1-209ENST00000472040 ZCCHC17Q9NP64 241 aaKnown RBP17.03■□□□□ 0.32
GREB1-209ENST00000472040 HOXC10Q9NYD6 342 aa17.03■□□□□ 0.32
GREB1-209ENST00000472040 PNMA2Q9UL42 364 aa17.03■□□□□ 0.32
GREB1-209ENST00000472040 MANSC4A6NHS7 340 aaPredicted RBP17.02■□□□□ 0.32
GREB1-209ENST00000472040 TMEM232C9JQI7 657 aa17.02■□□□□ 0.32
GREB1-209ENST00000472040 FMNL1O95466 1100 aaPredicted RBP17.02■□□□□ 0.32
GREB1-209ENST00000472040 TRAF1Q13077 416 aa17.02■□□□□ 0.32
GREB1-209ENST00000472040 FAM83BQ5T0W9 1011 aa17.02■□□□□ 0.32
GREB1-209ENST00000472040 NBPF11Q86T75 865 aa17.02■□□□□ 0.32
GREB1-209ENST00000472040 CCDC144CPQ8IYA2 1237 aa17.02■□□□□ 0.32
GREB1-209ENST00000472040 SRBD1Q8N5C6 995 aaKnown RBP17.02■□□□□ 0.32
GREB1-209ENST00000472040 PRPF38AQ8NAV1 312 aaKnown RBP17.02■□□□□ 0.32
GREB1-209ENST00000472040 NSUN7Q8NE18 718 aaKnown RBP17.02■□□□□ 0.32
GREB1-209ENST00000472040 WASF1Q92558 559 aa17.02■□□□□ 0.32
GREB1-209ENST00000472040 MTMR8Q96EF0 704 aa17.02■□□□□ 0.32
GREB1-209ENST00000472040 NCOA5Q9HCD5 579 aaKnown RBP17.02■□□□□ 0.32
GREB1-209ENST00000472040 ABT1Q9ULW3 272 aaKnown RBP17.02■□□□□ 0.32
GREB1-209ENST00000472040 AGTPBP1Q9UPW5 1226 aa17.02■□□□□ 0.32
GREB1-209ENST00000472040 PTPRFP10586 1907 aa17.02■□□□□ 0.31
GREB1-209ENST00000472040 RAD21O60216 631 aa17.01■□□□□ 0.31
GREB1-209ENST00000472040 DEXIO95424 95 aa17.01■□□□□ 0.31
GREB1-209ENST00000472040 CTDNEP1O95476 244 aa17.01■□□□□ 0.31
GREB1-209ENST00000472040 HSP90AA1P07900 732 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms