RNA–Protein interactions for RNA: ENST00000472034.5

LMNB1-205, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 730 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-205ENST00000472034 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.7□□□□□ -1.55e-8■■■■■ 60.8
LMNB1-205ENST00000472034 RHBDD1Q8TEB9 315 aa5.7□□□□□ -1.5
LMNB1-205ENST00000472034 HINFPQ9BQA5 517 aa5.7□□□□□ -1.5
LMNB1-205ENST00000472034 THUMPD2Q9BTF0 503 aaKnown RBP5.7□□□□□ -1.5
LMNB1-205ENST00000472034 NIFKQ9BYG3 293 aaKnown RBP5.7□□□□□ -1.5
LMNB1-205ENST00000472034 ATRXP46100 2492 aa5.7□□□□□ -1.5
LMNB1-205ENST00000472034 MAST2Q6P0Q8 1798 aa5.7□□□□□ -1.5
LMNB1-205ENST00000472034 ZFHX2Q9C0A1 2572 aaPredicted RBP5.69□□□□□ -1.5
LMNB1-205ENST00000472034 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.69□□□□□ -1.5
LMNB1-205ENST00000472034 UNCXA6NJT0 531 aa5.69□□□□□ -1.5
LMNB1-205ENST00000472034 SPATA31C2B4DYI2 1134 aa5.69□□□□□ -1.5
LMNB1-205ENST00000472034 PDHXO00330 501 aa5.69□□□□□ -1.5
LMNB1-205ENST00000472034 U2AF1L5P0DN76 240 aaPredicted RBP5.69□□□□□ -1.5
LMNB1-205ENST00000472034 CYP2C8P10632 490 aa5.69□□□□□ -1.5
LMNB1-205ENST00000472034 BCRP11274 1271 aa5.69□□□□□ -1.5
LMNB1-205ENST00000472034 CETPP11597 493 aa5.69□□□□□ -1.5
LMNB1-205ENST00000472034 EPHB4P54760 987 aa5.69□□□□□ -1.5
LMNB1-205ENST00000472034 U2AF1Q01081 240 aaKnown RBP eCLIP5.69□□□□□ -1.5
LMNB1-205ENST00000472034 DPYDQ12882 1025 aa5.69□□□□□ -1.5
LMNB1-205ENST00000472034 RASA3Q14644 834 aa5.69□□□□□ -1.5
LMNB1-205ENST00000472034 SUPT20HL1Q3ZLR7 823 aa5.69□□□□□ -1.5
LMNB1-205ENST00000472034 CRTC2Q53ET0 693 aaPredicted RBP5.69□□□□□ -1.5
LMNB1-205ENST00000472034 AKNAD1Q5T1N1 836 aa5.69□□□□□ -1.5
LMNB1-205ENST00000472034 NLRP10Q86W26 655 aa5.69□□□□□ -1.5
LMNB1-205ENST00000472034 TICAM2Q86XR7 235 aa5.69□□□□□ -1.5
LMNB1-205ENST00000472034 ZNF576Q9H609 170 aa5.69□□□□□ -1.5
LMNB1-205ENST00000472034 C1orf115Q9H7X2 142 aa5.69□□□□□ -1.5
LMNB1-205ENST00000472034 VEZTQ9HBM0 779 aa5.69□□□□□ -1.5
LMNB1-205ENST00000472034 ZNF358Q9NW07 568 aa5.69□□□□□ -1.5
LMNB1-205ENST00000472034 MIS18AQ9NYP9 233 aa5.69□□□□□ -1.5
LMNB1-205ENST00000472034 CXXC1Q9P0U4 656 aaPredicted RBP5.69□□□□□ -1.5
LMNB1-205ENST00000472034 ANKIB1Q9P2G1 1089 aa5.69□□□□□ -1.5
LMNB1-205ENST00000472034 GGA1Q9UJY5 639 aa5.69□□□□□ -1.5
LMNB1-205ENST00000472034 OGDHLQ9ULD0 1010 aa5.69□□□□□ -1.5
LMNB1-205ENST00000472034 SNCAIPQ9Y6H5 919 aa5.69□□□□□ -1.5
LMNB1-205ENST00000472034 ZNF804BA4D1E1 1349 aa5.69□□□□□ -1.5
LMNB1-205ENST00000472034 ZNF318Q5VUA4 2279 aa5.68□□□□□ -1.5
LMNB1-205ENST00000472034 PTPRZ1P23471 2315 aaPredicted RBP5.68□□□□□ -1.5
LMNB1-205ENST00000472034 SOBPA7XYQ1 873 aa5.68□□□□□ -1.5
LMNB1-205ENST00000472034 PI4K2BG5E9Z4 385 aa5.68□□□□□ -1.5
LMNB1-205ENST00000472034 WDHD1O75717 1129 aaPredicted RBP5.68□□□□□ -1.5
LMNB1-205ENST00000472034 ATG7O95352 703 aa5.68□□□□□ -1.5
LMNB1-205ENST00000472034 IGFBP4P22692 258 aa5.68□□□□□ -1.5
LMNB1-205ENST00000472034 PTSQ03393 145 aa5.68□□□□□ -1.5
LMNB1-205ENST00000472034 POU4F2Q12837 409 aa5.68□□□□□ -1.5
LMNB1-205ENST00000472034 MOGSQ13724 837 aa5.68□□□□□ -1.5
LMNB1-205ENST00000472034 ELOAQ14241 798 aaKnown RBP5.68□□□□□ -1.5
LMNB1-205ENST00000472034 NPAS3Q8IXF0 933 aa5.68□□□□□ -1.5
LMNB1-205ENST00000472034 MICALL1Q8N3F8 863 aa5.68□□□□□ -1.5
LMNB1-205ENST00000472034 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.68□□□□□ -1.5
LMNB1-205ENST00000472034 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.68□□□□□ -1.5
LMNB1-205ENST00000472034 BADQ92934 168 aa5.68□□□□□ -1.5
LMNB1-205ENST00000472034 TIMMDC1Q9NPL8 285 aa5.68□□□□□ -1.5
LMNB1-205ENST00000472034 SEC31BQ9NQW1 1179 aa5.68□□□□□ -1.5
LMNB1-205ENST00000472034 NXF1Q9UBU9 619 aaKnown RBP5.68□□□□□ -1.5
LMNB1-205ENST00000472034 NOVA2Q9UNW9 492 aaKnown RBP5.68□□□□□ -1.5
LMNB1-205ENST00000472034 KIAA1024Q9UPX6 916 aa5.68□□□□□ -1.5
LMNB1-205ENST00000472034 HRH3Q9Y5N1 445 aa5.68□□□□□ -1.5
LMNB1-205ENST00000472034 LRRC37A2A6NM11 1700 aa5.68□□□□□ -1.5
LMNB1-205ENST00000472034 TPRP12270 2363 aaKnown RBP5.67□□□□□ -1.5
LMNB1-205ENST00000472034 TRIOO75962 3097 aa5.67□□□□□ -1.5
LMNB1-205ENST00000472034 SFI1A8K8P3 1242 aa5.67□□□□□ -1.5
LMNB1-205ENST00000472034 GRXCR1A8MXD5 290 aa5.67□□□□□ -1.5
LMNB1-205ENST00000472034 PRR33A8MZF0 331 aa5.67□□□□□ -1.5
LMNB1-205ENST00000472034 STAU1O95793 577 aaKnown RBP5.67□□□□□ -1.5
LMNB1-205ENST00000472034 ANXA1P04083 346 aa5.67□□□□□ -1.5
LMNB1-205ENST00000472034 RPS8P62241 208 aaKnown RBP5.67□□□□□ -1.5
LMNB1-205ENST00000472034 SNAPC2Q13487 334 aa5.67□□□□□ -1.5
LMNB1-205ENST00000472034 COL9A2Q14055 689 aaPredicted RBP5.67□□□□□ -1.5
LMNB1-205ENST00000472034 DCTN1Q14203 1278 aa5.67□□□□□ -1.5
LMNB1-205ENST00000472034 KCTD2Q14681 263 aa5.67□□□□□ -1.5
LMNB1-205ENST00000472034 DLGAP5Q15398 846 aa5.67□□□□□ -1.5
LMNB1-205ENST00000472034 MCM10Q7L590 875 aa5.67□□□□□ -1.5
LMNB1-205ENST00000472034 TXNRD3Q86VQ6 643 aa5.67□□□□□ -1.5
LMNB1-205ENST00000472034 GAS2L2Q8NHY3 880 aa5.67□□□□□ -1.5
LMNB1-205ENST00000472034 ZKSCAN4Q969J2 545 aaPredicted RBP5.67□□□□□ -1.5
LMNB1-205ENST00000472034 PRMT6Q96LA8 375 aaPredicted RBP5.67□□□□□ -1.5
LMNB1-205ENST00000472034 RNPC3Q96LT9 517 aaKnown RBP5.67□□□□□ -1.5
LMNB1-205ENST00000472034 TEPSINQ96N21 525 aa5.67□□□□□ -1.5
LMNB1-205ENST00000472034 GAS2L1Q99501 681 aaPredicted RBP5.67□□□□□ -1.5
LMNB1-205ENST00000472034 ZCCHC17Q9NP64 241 aaKnown RBP5.67□□□□□ -1.5
LMNB1-205ENST00000472034 TRMT112Q9UI30 125 aaKnown RBP5.67□□□□□ -1.5
LMNB1-205ENST00000472034 RALYQ9UKM9 306 aaKnown RBP5.67□□□□□ -1.5
LMNB1-205ENST00000472034 DYRK1BQ9Y463 629 aa5.67□□□□□ -1.5
LMNB1-205ENST00000472034 PPP2R3BQ9Y5P8 575 aa5.67□□□□□ -1.5
LMNB1-205ENST00000472034 SH3TC1Q8TE82 1336 aa5.67□□□□□ -1.5
LMNB1-205ENST00000472034 CHD6Q8TD26 2715 aa5.67□□□□□ -1.5
LMNB1-205ENST00000472034 A0A1B0GTH6 734 aa5.66□□□□□ -1.5
LMNB1-205ENST00000472034 F8W031 263 aaPredicted RBP5.66□□□□□ -1.5
LMNB1-205ENST00000472034 H7C1W4 665 aa5.66□□□□□ -1.5
LMNB1-205ENST00000472034 TNPO2O14787 897 aaKnown RBP5.66□□□□□ -1.5
LMNB1-205ENST00000472034 RHOQP17081 205 aa5.66□□□□□ -1.5
LMNB1-205ENST00000472034 CAPN2P17655 700 aa5.66□□□□□ -1.5
LMNB1-205ENST00000472034 KLRK1P26718 216 aa5.66□□□□□ -1.5
LMNB1-205ENST00000472034 SETQ01105 290 aaPredicted RBP5.66□□□□□ -1.5
LMNB1-205ENST00000472034 SWI5Q1ZZU3 235 aa5.66□□□□□ -1.5
LMNB1-205ENST00000472034 PROSER3Q2NL68 480 aa5.66□□□□□ -1.5
LMNB1-205ENST00000472034 STRIP1Q5VSL9 837 aa5.66□□□□□ -1.5
LMNB1-205ENST00000472034 LRP10Q7Z4F1 713 aa5.66□□□□□ -1.5
LMNB1-205ENST00000472034 ANKRD23Q86SG2 305 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms