RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 SLFN13Q68D06 897 aa10.83□□□□□ -0.68
SYN3-211ENST00000472027 PLEKHH3Q7Z736 793 aa10.83□□□□□ -0.68
SYN3-211ENST00000472027 TBC1D10CQ8IV04 446 aa10.83□□□□□ -0.68
SYN3-211ENST00000472027 LRRC47Q8N1G4 583 aaKnown RBP10.83□□□□□ -0.68
SYN3-211ENST00000472027 MB21D1Q8N884 522 aa10.83□□□□□ -0.68
SYN3-211ENST00000472027 GMCL1P1Q8NEA9 526 aa10.83□□□□□ -0.68
SYN3-211ENST00000472027 MOV10L1Q9BXT6 1211 aaKnown RBP10.83□□□□□ -0.68
SYN3-211ENST00000472027 NBPF3Q9H094 633 aa10.83□□□□□ -0.68
SYN3-211ENST00000472027 SPATC1LQ9H0A9 340 aa10.83□□□□□ -0.68
SYN3-211ENST00000472027 RNF41Q9H4P4 317 aaPredicted RBP10.83□□□□□ -0.68
SYN3-211ENST00000472027 CWC22Q9HCG8 908 aaKnown RBP10.83□□□□□ -0.68
SYN3-211ENST00000472027 CTNNA3Q9UI47 895 aa10.83□□□□□ -0.68
SYN3-211ENST00000472027 PPP1R9AQ9ULJ8 1098 aa10.83□□□□□ -0.68
SYN3-211ENST00000472027 STX8Q9UNK0 236 aa10.83□□□□□ -0.68
SYN3-211ENST00000472027 GREB1LQ9C091 1923 aaPredicted RBP10.82□□□□□ -0.68
SYN3-211ENST00000472027 VWA5AO00534 786 aa10.82□□□□□ -0.68
SYN3-211ENST00000472027 EN2P19622 333 aaPredicted RBP10.82□□□□□ -0.68
SYN3-211ENST00000472027 PTPREP23469 700 aa10.82□□□□□ -0.68
SYN3-211ENST00000472027 NOVP48745 357 aa10.82□□□□□ -0.68
SYN3-211ENST00000472027 MLLT1Q03111 559 aaPredicted RBP10.82□□□□□ -0.68
SYN3-211ENST00000472027 PLS1Q14651 629 aa10.82□□□□□ -0.68
SYN3-211ENST00000472027 TMEM132BQ14DG7 1078 aa10.82□□□□□ -0.68
SYN3-211ENST00000472027 IMMTQ16891 758 aaKnown RBP10.82□□□□□ -0.68
SYN3-211ENST00000472027 MORN1Q5T089 497 aa10.82□□□□□ -0.68
SYN3-211ENST00000472027 WDR78Q5VTH9 848 aa10.82□□□□□ -0.68
SYN3-211ENST00000472027 NKX2-3Q8TAU0 364 aa10.82□□□□□ -0.68
SYN3-211ENST00000472027 SOCS4Q8WXH5 440 aa10.82□□□□□ -0.68
SYN3-211ENST00000472027 USP6NLQ92738 828 aa10.82□□□□□ -0.68
SYN3-211ENST00000472027 TCP11L1Q9NUJ3 509 aa10.82□□□□□ -0.68
SYN3-211ENST00000472027 MGAMO43451 1857 aa10.82□□□□□ -0.68
SYN3-211ENST00000472027 RAD50Q92878 1312 aa10.82□□□□□ -0.68
SYN3-211ENST00000472027 SGSM2O43147 1006 aa10.81□□□□□ -0.68
SYN3-211ENST00000472027 INHAP05111 366 aa10.81□□□□□ -0.68
SYN3-211ENST00000472027 BMP3P12645 472 aa10.81□□□□□ -0.68
SYN3-211ENST00000472027 XRCC5P13010 732 aaKnown RBP10.81□□□□□ -0.68
SYN3-211ENST00000472027 ERCC3P19447 782 aa10.81□□□□□ -0.68
SYN3-211ENST00000472027 MCCP23508 829 aa10.81□□□□□ -0.68
SYN3-211ENST00000472027 PTH1RQ03431 593 aa10.81□□□□□ -0.68
SYN3-211ENST00000472027 PRPF38AQ8NAV1 312 aaKnown RBP10.81□□□□□ -0.68
SYN3-211ENST00000472027 ESR2Q92731 530 aa10.81□□□□□ -0.68
SYN3-211ENST00000472027 CHMP4CQ96CF2 233 aa10.81□□□□□ -0.68
SYN3-211ENST00000472027 SLF1Q9BQI6 1058 aa10.81□□□□□ -0.68
SYN3-211ENST00000472027 FEM1BQ9UK73 627 aa10.81□□□□□ -0.68
SYN3-211ENST00000472027 NEDD4P46934 1319 aa10.81□□□□□ -0.68
SYN3-211ENST00000472027 SLC15A5A6NIM6 579 aa10.8□□□□□ -0.68
SYN3-211ENST00000472027 SLC25A27O95847 323 aa10.8□□□□□ -0.68
SYN3-211ENST00000472027 CENPBP07199 599 aaPredicted RBP10.8□□□□□ -0.68
SYN3-211ENST00000472027 CCL5P13501 91 aa10.8□□□□□ -0.68
SYN3-211ENST00000472027 STAT3P40763 770 aa10.8□□□□□ -0.68
SYN3-211ENST00000472027 RGS2P41220 211 aa10.8□□□□□ -0.68
SYN3-211ENST00000472027 SLC1A4P43007 532 aa10.8□□□□□ -0.68
SYN3-211ENST00000472027 MAP2K5Q13163 448 aa10.8□□□□□ -0.68
SYN3-211ENST00000472027 NCAPG2Q86XI2 1143 aa10.8□□□□□ -0.68
SYN3-211ENST00000472027 SHCBP1Q8NEM2 672 aa10.8□□□□□ -0.68
SYN3-211ENST00000472027 REPS2Q8NFH8 660 aa10.8□□□□□ -0.68
SYN3-211ENST00000472027 TRIB2Q92519 343 aa10.8□□□□□ -0.68
SYN3-211ENST00000472027 KIFC2Q96AC6 838 aa10.8□□□□□ -0.68
SYN3-211ENST00000472027 GMCL1Q96IK5 515 aa10.8□□□□□ -0.68
SYN3-211ENST00000472027 TTC14Q96N46 770 aa10.8□□□□□ -0.68
SYN3-211ENST00000472027 TMEM47Q9BQJ4 181 aa10.8□□□□□ -0.68
SYN3-211ENST00000472027 ZKSCAN3Q9BRR0 538 aa10.8□□□□□ -0.68
SYN3-211ENST00000472027 RNF208Q9H0X6 261 aa10.8□□□□□ -0.68
SYN3-211ENST00000472027 UNC93B1Q9H1C4 597 aa10.8□□□□□ -0.68
SYN3-211ENST00000472027 MROH8Q9H579 483 aa10.8□□□□□ -0.68
SYN3-211ENST00000472027 IVNS1ABPQ9Y6Y0 642 aa10.8□□□□□ -0.68
SYN3-211ENST00000472027 B4E1Z4 1266 aa10.79□□□□□ -0.68
SYN3-211ENST00000472027 TMEM232C9JQI7 657 aa10.79□□□□□ -0.68
SYN3-211ENST00000472027 STRNO43815 780 aa10.79□□□□□ -0.68
SYN3-211ENST00000472027 ZBED4O75132 1171 aa10.79□□□□□ -0.68
SYN3-211ENST00000472027 KDM4AO75164 1064 aa10.79□□□□□ -0.68
SYN3-211ENST00000472027 HMGCRP04035 888 aa10.79□□□□□ -0.68
SYN3-211ENST00000472027 TOP1P11387 765 aaKnown RBP10.79□□□□□ -0.68
SYN3-211ENST00000472027 NT5C2P49902 561 aa10.79□□□□□ -0.68
SYN3-211ENST00000472027 TRIM32Q13049 653 aa10.79□□□□□ -0.68
SYN3-211ENST00000472027 GRB14Q14449 540 aa10.79□□□□□ -0.68
SYN3-211ENST00000472027 CCL14Q16627 93 aa10.79□□□□□ -0.68
SYN3-211ENST00000472027 BMP2KLQ5H9B9 411 aa10.79□□□□□ -0.68
SYN3-211ENST00000472027 RCSD1Q6JBY9 416 aa10.79□□□□□ -0.68
SYN3-211ENST00000472027 RIOX2Q8IUF8 465 aa10.79□□□□□ -0.68
SYN3-211ENST00000472027 TRMT44Q8IYL2 757 aaKnown RBP10.79□□□□□ -0.68
SYN3-211ENST00000472027 CHURC1Q8WUH1 139 aa10.79□□□□□ -0.68
SYN3-211ENST00000472027 MAP4K1Q92918 833 aa10.79□□□□□ -0.68
SYN3-211ENST00000472027 ZSWIM5Q9P217 1185 aa10.79□□□□□ -0.68
SYN3-211ENST00000472027 ZNF214Q9UL59 606 aaPredicted RBP10.79□□□□□ -0.68
SYN3-211ENST00000472027 ISY1Q9ULR0 285 aaKnown RBP10.79□□□□□ -0.68
SYN3-211ENST00000472027 MTMR7Q9Y216 660 aa10.79□□□□□ -0.68
SYN3-211ENST00000472027 U3KPZ7 1027 aaPredicted RBP10.79□□□□□ -0.68
SYN3-211ENST00000472027 RLFQ13129 1914 aa10.78□□□□□ -0.68
SYN3-211ENST00000472027 GJB1P08034 283 aa10.78□□□□□ -0.68
SYN3-211ENST00000472027 CYP21A2P08686 494 aa10.78□□□□□ -0.68
SYN3-211ENST00000472027 HOXC6P09630 235 aa10.78□□□□□ -0.68
SYN3-211ENST00000472027 ADORA2AP29274 412 aa10.78□□□□□ -0.68
SYN3-211ENST00000472027 GJA8P48165 433 aa10.78□□□□□ -0.68
SYN3-211ENST00000472027 STAT2P52630 851 aa10.78□□□□□ -0.68
SYN3-211ENST00000472027 IKQ13123 557 aaPredicted RBP10.78□□□□□ -0.68
SYN3-211ENST00000472027 KCTD1Q719H9 257 aa10.78□□□□□ -0.68
SYN3-211ENST00000472027 DPP9Q86TI2 863 aa10.78□□□□□ -0.68
SYN3-211ENST00000472027 FAM160B2Q86V87 743 aa10.78□□□□□ -0.68
SYN3-211ENST00000472027 IQCA1Q86XH1 822 aa10.78□□□□□ -0.68
SYN3-211ENST00000472027 DGKHQ86XP1 1220 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms