RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 SPDL1Q96EA4 605 aa14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 EEF2KMTQ96G04 330 aa14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 XAGE2Q96GT9 111 aa14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 ABT1Q9ULW3 272 aaKnown RBP14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 TTC38Q5R3I4 469 aa14.57□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 U2AF2P26368 475 aaKnown RBP eCLIP14.56□□□□□ -0.081e-6■■■■□ 21.6
NPHP3-ACAD11-201ENST00000471702 ATICP31939 592 aa14.56□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 CCDC127Q96BQ5 260 aa14.56□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 TSPYL2Q9H2G4 693 aaPredicted RBP14.56□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 CYP26C1Q6V0L0 522 aa14.56□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 PPP1R16BQ96T49 567 aa14.56□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 NAPGQ99747 312 aaPredicted RBP14.56□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 HAUS8Q9BT25 410 aa14.56□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 AKT3Q9Y243 479 aa14.56□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 MAD1L1Q9Y6D9 718 aa14.56□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 RRAGAQ7L523 313 aa14.56□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 HINFPQ9BQA5 517 aa14.56□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 ZFYVE1Q9HBF4 777 aa14.56□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 ALDH1L1O75891 902 aa14.56□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 SLITRK6Q9H5Y7 841 aa14.56□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 USP21Q9UK80 565 aa14.56□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 SYNDIG1LA6NDD5 238 aa14.56□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 MMEL1Q495T6 779 aa14.56□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 MFSD14BQ5SR56 506 aa14.56□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 FAM173BQ6P4H8 233 aa14.56□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 IFT20Q8IY31 132 aa14.56□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 KIF14Q15058 1648 aa14.55□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 LRRC47Q8N1G4 583 aaKnown RBP14.55□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 CDC26Q8NHZ8 85 aa14.55□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 NUB1Q9Y5A7 615 aa14.55□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 GCP02774 474 aa14.55□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 SH3TC1Q8TE82 1336 aa14.55□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 ANGEL1Q9UNK9 670 aaKnown RBP14.55□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 GUCY2FP51841 1108 aa14.55□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 MYSM1Q5VVJ2 828 aa14.55□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 ANKRD44Q8N8A2 993 aa14.55□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 ALKBH8Q96BT7 664 aaKnown RBP14.55□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 MOSPD1Q9UJG1 213 aa14.55□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 UBN2Q6ZU65 1347 aa14.55□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 TMOD1P28289 359 aa14.55□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 POLGP54098 1239 aaPredicted RBP14.55□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 XKR9Q5GH70 373 aa14.55□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 TMC2Q8TDI7 906 aa14.55□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 PCDH11XQ9BZA7 1347 aa14.55□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 PCDH11YQ9BZA8 1340 aa14.55□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 SESN3P58005 492 aa14.55□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 TFAP4Q01664 338 aa14.55□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 ZNF449Q6P9G9 518 aa14.55□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 MIER3Q7Z3K6 550 aa14.55□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 TYW5A2RUC4 315 aaKnown RBP14.55□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 STAM2O75886 525 aa14.55□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 FLOT1O75955 427 aa14.55□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 FIS1Q9Y3D6 152 aa14.55□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 UHMK1Q8TAS1 419 aaKnown RBP14.54□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 GNPTABQ3T906 1256 aa14.54□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 C1orf228Q6PIY5 440 aa14.54□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 C2CD5Q86YS7 1000 aa14.54□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 TECP42680 631 aa14.54□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 LLGL1Q15334 1064 aa14.54□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 N4BP2L2Q92802 583 aaPredicted RBP14.54□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 KRT3P12035 628 aa14.54□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 SKIV2LQ15477 1246 aaKnown RBP14.54□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 SPICE1Q8N0Z3 855 aa14.54□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 DCAF5Q96JK2 942 aa14.54□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 NELFBQ8WX92 580 aa14.54□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 ATP6V1E2Q96A05 226 aa14.54□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 MTRQ99707 1265 aa14.54□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 CDCA7Q9BWT1 371 aaPredicted RBP14.54□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 LRFN2Q9ULH4 789 aa14.54□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 MAST3O60307 1309 aa14.54□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 SZRD1Q7Z422 152 aa14.54□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 TRMT44Q8IYL2 757 aaKnown RBP14.54□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 TRIM68Q6AZZ1 485 aa14.53□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 REXO1Q8N1G1 1221 aaKnown RBP14.53□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 PDE8AO60658 829 aa14.53□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 MAP3K7CLP57077 242 aa14.53□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 TSPYL6Q8N831 410 aa14.53□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 FAM71BQ8TC56 605 aa14.53□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 ANGPTL3Q9Y5C1 460 aa14.53□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 LONRF2Q1L5Z9 754 aa14.53□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 SECISBP2LQ93073 1101 aaKnown RBP14.53□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 NCAPD3P42695 1498 aa14.53□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 DHX29Q7Z478 1369 aaKnown RBP14.53□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 TNNC2P02585 160 aa14.53□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 ALDH1B1P30837 517 aa14.53□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 ANO1Q5XXA6 986 aa14.53□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 ZBTB8OSQ8IWT0 167 aa14.53□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 U2AF1L4Q8WU68 220 aaKnown RBP14.53□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 FGD4Q96M96 766 aa14.53□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 PLEKHG3A1L390 1219 aa14.53□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 RPS6KA1Q15418 735 aa14.53□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.53□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 ARHGEF1Q92888 912 aaKnown RBP14.53□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 FAM227BQ96M60 508 aa14.53□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 SYTL2Q9HCH5 934 aa14.53□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 GIMAP4Q9NUV9 329 aa14.53□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 CABP7Q86V35 215 aa14.53□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 TEKT1Q969V4 418 aa14.53□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 LMNTD2Q8IXW0 634 aa14.52□□□□□ -0.08
NPHP3-ACAD11-201ENST00000471702 SLF1Q9BQI6 1058 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 225.4 ms