RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 CNMDO75829 334 aa17.99■□□□□ 0.47
SDC3-203ENST00000471567 BMP3P12645 472 aa17.99■□□□□ 0.47
SDC3-203ENST00000471567 CCNA1P78396 465 aa17.99■□□□□ 0.47
SDC3-203ENST00000471567 NCOA7Q8NI08 942 aa17.99■□□□□ 0.47
SDC3-203ENST00000471567 ZSCAN10Q96SZ4 725 aaPredicted RBP17.99■□□□□ 0.47
SDC3-203ENST00000471567 PAGR1Q9BTK6 254 aa17.99■□□□□ 0.47
SDC3-203ENST00000471567 FEM1BQ9UK73 627 aa17.99■□□□□ 0.47
SDC3-203ENST00000471567 PPP1R9AQ9ULJ8 1098 aa17.99■□□□□ 0.47
SDC3-203ENST00000471567 ADAMTS5Q9UNA0 930 aa17.99■□□□□ 0.47
SDC3-203ENST00000471567 SLC27A2O14975 620 aa17.98■□□□□ 0.47
SDC3-203ENST00000471567 SLC1A4P43007 532 aa17.98■□□□□ 0.47
SDC3-203ENST00000471567 Q3C1V9 767 aa17.98■□□□□ 0.47
SDC3-203ENST00000471567 RNF20Q5VTR2 975 aa17.98■□□□□ 0.47
SDC3-203ENST00000471567 CREB3L3Q68CJ9 461 aa17.98■□□□□ 0.47
SDC3-203ENST00000471567 RALYLQ86SE5 291 aaKnown RBP17.98■□□□□ 0.47
SDC3-203ENST00000471567 NUP88Q99567 741 aaPredicted RBP17.98■□□□□ 0.47
SDC3-203ENST00000471567 SLF1Q9BQI6 1058 aa17.98■□□□□ 0.47
SDC3-203ENST00000471567 ZKSCAN3Q9BRR0 538 aa17.98■□□□□ 0.47
SDC3-203ENST00000471567 UBAC1Q9BSL1 405 aa17.98■□□□□ 0.47
SDC3-203ENST00000471567 BTBD7Q9P203 1132 aa17.98■□□□□ 0.47
SDC3-203ENST00000471567 SRRDQ9UH36 339 aa17.98■□□□□ 0.47
SDC3-203ENST00000471567 RLFQ13129 1914 aa17.98■□□□□ 0.47
SDC3-203ENST00000471567 TNPO2O14787 897 aaKnown RBP17.97■□□□□ 0.47
SDC3-203ENST00000471567 PLA2G6O60733 806 aa17.97■□□□□ 0.47
SDC3-203ENST00000471567 REC8O95072 547 aa17.97■□□□□ 0.47
SDC3-203ENST00000471567 MCCP23508 829 aa17.97■□□□□ 0.47
SDC3-203ENST00000471567 MAPK4P31152 587 aa17.97■□□□□ 0.47
SDC3-203ENST00000471567 STOX1Q6ZVD7 989 aa17.97■□□□□ 0.47
SDC3-203ENST00000471567 PRPF38AQ8NAV1 312 aaKnown RBP17.97■□□□□ 0.47
SDC3-203ENST00000471567 DCAF4Q8WV16 495 aa17.97■□□□□ 0.47
SDC3-203ENST00000471567 COA7Q96BR5 231 aa17.97■□□□□ 0.47
SDC3-203ENST00000471567 ATG4CQ96DT6 458 aa17.97■□□□□ 0.47
SDC3-203ENST00000471567 FBXO28Q9NVF7 368 aa17.97■□□□□ 0.47
SDC3-203ENST00000471567 TAF6LQ9Y6J9 622 aa17.97■□□□□ 0.47
SDC3-203ENST00000471567 EPB41L2O43491 1005 aaKnown RBP17.96■□□□□ 0.47
SDC3-203ENST00000471567 PEX10O60683 326 aa17.96■□□□□ 0.47
SDC3-203ENST00000471567 CYB5R4Q7L1T6 521 aa17.96■□□□□ 0.47
SDC3-203ENST00000471567 FAM160B2Q86V87 743 aa17.96■□□□□ 0.47
SDC3-203ENST00000471567 CCAR1Q8IX12 1150 aaKnown RBP17.96■□□□□ 0.47
SDC3-203ENST00000471567 ENAHQ8N8S7 591 aaPredicted RBP17.96■□□□□ 0.47
SDC3-203ENST00000471567 CHURC1Q8WUH1 139 aa17.96■□□□□ 0.47
SDC3-203ENST00000471567 TNKSO95271 1327 aa17.96■□□□□ 0.46
SDC3-203ENST00000471567 TMEM232C9JQI7 657 aa17.95■□□□□ 0.46
SDC3-203ENST00000471567 VWA5AO00534 786 aa17.95■□□□□ 0.46
SDC3-203ENST00000471567 ECM2O94769 699 aaPredicted RBP17.95■□□□□ 0.46
SDC3-203ENST00000471567 FDX1P10109 184 aa17.95■□□□□ 0.46
SDC3-203ENST00000471567 TSGA10IPQ3SY00 556 aa17.95■□□□□ 0.46
SDC3-203ENST00000471567 SHCBP1Q8NEM2 672 aa17.95■□□□□ 0.46
SDC3-203ENST00000471567 ABHD8Q96I13 439 aa17.95■□□□□ 0.46
SDC3-203ENST00000471567 MTA3Q9BTC8 594 aa17.95■□□□□ 0.46
SDC3-203ENST00000471567 SPATC1LQ9H0A9 340 aa17.95■□□□□ 0.46
SDC3-203ENST00000471567 KAT14Q9H8E8 782 aa17.95■□□□□ 0.46
SDC3-203ENST00000471567 MGAMO43451 1857 aa17.95■□□□□ 0.46
SDC3-203ENST00000471567 PARP14Q460N5 1801 aa17.94■□□□□ 0.46
SDC3-203ENST00000471567 SNHG28P0DPA3 235 aa17.94■□□□□ 0.46
SDC3-203ENST00000471567 STAT2P52630 851 aa17.94■□□□□ 0.46
SDC3-203ENST00000471567 SART3Q15020 963 aaKnown RBP17.94■□□□□ 0.46
SDC3-203ENST00000471567 SEC23AQ15436 765 aa17.94■□□□□ 0.46
SDC3-203ENST00000471567 SAMD1Q6SPF0 538 aaPredicted RBP17.94■□□□□ 0.46
SDC3-203ENST00000471567 MB21D2Q8IYB1 491 aaPredicted RBP17.94■□□□□ 0.46
SDC3-203ENST00000471567 PNMA1Q8ND90 353 aa17.94■□□□□ 0.46
SDC3-203ENST00000471567 PORCNQ9H237 461 aa17.94■□□□□ 0.46
SDC3-203ENST00000471567 HPS5Q9UPZ3 1129 aa17.94■□□□□ 0.46
SDC3-203ENST00000471567 A0A0G2JMZ2 1700 aa17.94■□□□□ 0.46
SDC3-203ENST00000471567 ZSWIM8A7E2V4 1837 aa17.93■□□□□ 0.46
SDC3-203ENST00000471567 ERICH2A1L162 156 aa17.93■□□□□ 0.46
SDC3-203ENST00000471567 ZBED4O75132 1171 aa17.93■□□□□ 0.46
SDC3-203ENST00000471567 PDHBP11177 359 aa17.93■□□□□ 0.46
SDC3-203ENST00000471567 ZKSCAN1P17029 563 aaPredicted RBP17.93■□□□□ 0.46
SDC3-203ENST00000471567 PRKCZQ05513 592 aa17.93■□□□□ 0.46
SDC3-203ENST00000471567 IRF5Q13568 498 aa17.93■□□□□ 0.46
SDC3-203ENST00000471567 TMEM132BQ14DG7 1078 aa17.93■□□□□ 0.46
SDC3-203ENST00000471567 IFIT1BQ5T764 474 aaKnown RBP17.93■□□□□ 0.46
SDC3-203ENST00000471567 KCTD1Q719H9 257 aa17.93■□□□□ 0.46
SDC3-203ENST00000471567 GPR142Q7Z601 462 aa17.93■□□□□ 0.46
SDC3-203ENST00000471567 PLEKHH3Q7Z736 793 aa17.93■□□□□ 0.46
SDC3-203ENST00000471567 REPS2Q8NFH8 660 aa17.93■□□□□ 0.46
SDC3-203ENST00000471567 KIFC2Q96AC6 838 aa17.93■□□□□ 0.46
SDC3-203ENST00000471567 MOV10L1Q9BXT6 1211 aaKnown RBP17.93■□□□□ 0.46
SDC3-203ENST00000471567 ISY1Q9ULR0 285 aaKnown RBP17.93■□□□□ 0.46
SDC3-203ENST00000471567 PTCH2Q9Y6C5 1203 aa17.93■□□□□ 0.46
SDC3-203ENST00000471567 IFIT3O14879 490 aaKnown RBP17.92■□□□□ 0.46
SDC3-203ENST00000471567 ATP2A1O14983 1001 aa17.92■□□□□ 0.46
SDC3-203ENST00000471567 SLC25A27O95847 323 aa17.92■□□□□ 0.46
SDC3-203ENST00000471567 MCM5P33992 734 aa17.92■□□□□ 0.46
SDC3-203ENST00000471567 COPB2P35606 906 aa17.92■□□□□ 0.46
SDC3-203ENST00000471567 STAT3P40763 770 aa17.92■□□□□ 0.46
SDC3-203ENST00000471567 FLT3LGP49771 235 aa17.92■□□□□ 0.46
SDC3-203ENST00000471567 KRT32Q14532 448 aa17.92■□□□□ 0.46
SDC3-203ENST00000471567 PLS1Q14651 629 aa17.92■□□□□ 0.46
SDC3-203ENST00000471567 CCDC96Q2M329 555 aa17.92■□□□□ 0.46
SDC3-203ENST00000471567 GPATCH4Q5T3I0 446 aaKnown RBP17.92■□□□□ 0.46
SDC3-203ENST00000471567 BTNL9Q6UXG8 535 aa17.92■□□□□ 0.46
SDC3-203ENST00000471567 RIOX2Q8IUF8 465 aa17.92■□□□□ 0.46
SDC3-203ENST00000471567 RAET1EQ8TD07 263 aa17.92■□□□□ 0.46
SDC3-203ENST00000471567 SOCS4Q8WXH5 440 aa17.92■□□□□ 0.46
SDC3-203ENST00000471567 KCNB2Q92953 911 aa17.92■□□□□ 0.46
SDC3-203ENST00000471567 MROH8Q9H579 483 aa17.92■□□□□ 0.46
SDC3-203ENST00000471567 SLC38A10Q9HBR0 1119 aa17.92■□□□□ 0.46
SDC3-203ENST00000471567 CWC22Q9HCG8 908 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms