RNA–Protein interactions for RNA: ENST00000471511.1

RPRD1B-204, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-204ENST00000471511 RIPK3Q9Y572 518 aa11.73□□□□□ -0.53
RPRD1B-204ENST00000471511 NR2E3Q9Y5X4 410 aa11.73□□□□□ -0.53
RPRD1B-204ENST00000471511 GREB1LQ9C091 1923 aaPredicted RBP11.72□□□□□ -0.53
RPRD1B-204ENST00000471511 ROBO3Q96MS0 1386 aa11.72□□□□□ -0.53
RPRD1B-204ENST00000471511 PATL2C9JE40 543 aaKnown RBP11.72□□□□□ -0.53
RPRD1B-204ENST00000471511 WDR46O15213 610 aaKnown RBP11.72□□□□□ -0.53
RPRD1B-204ENST00000471511 PGK2P07205 417 aa11.72□□□□□ -0.53
RPRD1B-204ENST00000471511 TAL1P17542 331 aaPredicted RBP11.72□□□□□ -0.53
RPRD1B-204ENST00000471511 PLS1Q14651 629 aa11.72□□□□□ -0.53
RPRD1B-204ENST00000471511 ZMYM1Q5SVZ6 1142 aa11.72□□□□□ -0.53
RPRD1B-204ENST00000471511 NCAPG2Q86XI2 1143 aa11.72□□□□□ -0.53
RPRD1B-204ENST00000471511 SHCBP1Q8NEM2 672 aa11.72□□□□□ -0.53
RPRD1B-204ENST00000471511 KANSL2Q9H9L4 492 aa11.72□□□□□ -0.53
RPRD1B-204ENST00000471511 ARHGEF10LQ9HCE6 1279 aa11.72□□□□□ -0.53
RPRD1B-204ENST00000471511 ARPP21Q9UBL0 812 aaPredicted RBP11.72□□□□□ -0.53
RPRD1B-204ENST00000471511 DDX20Q9UHI6 824 aaKnown RBP11.72□□□□□ -0.53
RPRD1B-204ENST00000471511 ZNF214Q9UL59 606 aaPredicted RBP11.72□□□□□ -0.53
RPRD1B-204ENST00000471511 PPP1R9AQ9ULJ8 1098 aa11.72□□□□□ -0.53
RPRD1B-204ENST00000471511 PARP14Q460N5 1801 aa11.72□□□□□ -0.53
RPRD1B-204ENST00000471511 F5H6K3 240 aa11.71□□□□□ -0.53
RPRD1B-204ENST00000471511 VWA5AO00534 786 aa11.71□□□□□ -0.53
RPRD1B-204ENST00000471511 NDUFB10O96000 172 aa11.71□□□□□ -0.53
RPRD1B-204ENST00000471511 CAPN2P17655 700 aa11.71□□□□□ -0.53
RPRD1B-204ENST00000471511 MAGEA10P43363 369 aaPredicted RBP11.71□□□□□ -0.53
RPRD1B-204ENST00000471511 KLRC3Q07444 240 aa11.71□□□□□ -0.53
RPRD1B-204ENST00000471511 FAM47AQ5JRC9 791 aa11.71□□□□□ -0.53
RPRD1B-204ENST00000471511 GJC2Q5T442 439 aaPredicted RBP11.71□□□□□ -0.53
RPRD1B-204ENST00000471511 VPS53Q5VIR6 699 aa11.71□□□□□ -0.53
RPRD1B-204ENST00000471511 MFSD14CQ5VZR4 134 aa11.71□□□□□ -0.53
RPRD1B-204ENST00000471511 GIMAP6Q6P9H5 292 aa11.71□□□□□ -0.53
RPRD1B-204ENST00000471511 RASGRP2Q7LDG7 609 aa11.71□□□□□ -0.53
RPRD1B-204ENST00000471511 DPP9Q86TI2 863 aa11.71□□□□□ -0.53
RPRD1B-204ENST00000471511 CHMP4CQ96CF2 233 aa11.71□□□□□ -0.53
RPRD1B-204ENST00000471511 CWC22Q9HCG8 908 aaKnown RBP11.71□□□□□ -0.53
RPRD1B-204ENST00000471511 NYAP2Q9P242 653 aa11.71□□□□□ -0.53
RPRD1B-204ENST00000471511 CLIP2Q9UDT6 1046 aa11.71□□□□□ -0.53
RPRD1B-204ENST00000471511 TTC41PQ6P2S7 1318 aa11.7□□□□□ -0.54
RPRD1B-204ENST00000471511 GLRX3O76003 335 aaKnown RBP11.7□□□□□ -0.54
RPRD1B-204ENST00000471511 CNGA1P29973 690 aa11.7□□□□□ -0.54
RPRD1B-204ENST00000471511 ATN1P54259 1190 aaPredicted RBP11.7□□□□□ -0.54
RPRD1B-204ENST00000471511 ZNF792Q3KQV3 632 aa11.7□□□□□ -0.54
RPRD1B-204ENST00000471511 OLFML2BQ68BL8 750 aa11.7□□□□□ -0.54
RPRD1B-204ENST00000471511 RIOX2Q8IUF8 465 aa11.7□□□□□ -0.54
RPRD1B-204ENST00000471511 CEP95Q96GE4 821 aa11.7□□□□□ -0.54
RPRD1B-204ENST00000471511 MAML3Q96JK9 1138 aa11.7□□□□□ -0.54
RPRD1B-204ENST00000471511 IVNS1ABPQ9Y6Y0 642 aa11.7□□□□□ -0.54
RPRD1B-204ENST00000471511 DNAH12Q6ZR08 3092 aa11.7□□□□□ -0.54
RPRD1B-204ENST00000471511 STRNO43815 780 aa11.69□□□□□ -0.54
RPRD1B-204ENST00000471511 RAD21O60216 631 aa11.69□□□□□ -0.54
RPRD1B-204ENST00000471511 MX1P20591 662 aa11.69□□□□□ -0.54
RPRD1B-204ENST00000471511 STAT3P40763 770 aa11.69□□□□□ -0.54
RPRD1B-204ENST00000471511 IRX5P78411 483 aaPredicted RBP11.69□□□□□ -0.54
RPRD1B-204ENST00000471511 CTDSPL2Q05D32 466 aa11.69□□□□□ -0.54
RPRD1B-204ENST00000471511 ANKRD45Q5TZF3 282 aa11.69□□□□□ -0.54
RPRD1B-204ENST00000471511 LRRC47Q8N1G4 583 aaKnown RBP11.69□□□□□ -0.54
RPRD1B-204ENST00000471511 MB21D1Q8N884 522 aa11.69□□□□□ -0.54
RPRD1B-204ENST00000471511 MKL1Q969V6 931 aa11.69□□□□□ -0.54
RPRD1B-204ENST00000471511 LENG1Q96BZ8 264 aaPredicted RBP11.69□□□□□ -0.54
RPRD1B-204ENST00000471511 FGD4Q96M96 766 aa11.69□□□□□ -0.54
RPRD1B-204ENST00000471511 SENP6Q9GZR1 1112 aaPredicted RBP11.69□□□□□ -0.54
RPRD1B-204ENST00000471511 MROH8Q9H579 483 aa11.69□□□□□ -0.54
RPRD1B-204ENST00000471511 MKNK2Q9HBH9 465 aa11.69□□□□□ -0.54
RPRD1B-204ENST00000471511 MTMR4Q9NYA4 1195 aa11.69□□□□□ -0.54
RPRD1B-204ENST00000471511 COL11A1P12107 1806 aaPredicted RBP11.69□□□□□ -0.54
RPRD1B-204ENST00000471511 MYH8P13535 1937 aa11.68□□□□□ -0.54
RPRD1B-204ENST00000471511 FRMPD3Q5JV73 1810 aa11.68□□□□□ -0.54
RPRD1B-204ENST00000471511 ZNF236Q9UL36 1845 aa11.68□□□□□ -0.54
RPRD1B-204ENST00000471511 NMT2O60551 498 aa11.68□□□□□ -0.54
RPRD1B-204ENST00000471511 IGHDP01880 384 aa11.68□□□□□ -0.54
RPRD1B-204ENST00000471511 APPP05067 770 aa11.68□□□□□ -0.54
RPRD1B-204ENST00000471511 ZFYP08048 801 aaPredicted RBP11.68□□□□□ -0.54
RPRD1B-204ENST00000471511 ZNF865P0CJ78 1059 aaPredicted RBP11.68□□□□□ -0.54
RPRD1B-204ENST00000471511 BMP8BP34820 402 aa11.68□□□□□ -0.54
RPRD1B-204ENST00000471511 TDO2P48775 406 aa11.68□□□□□ -0.54
RPRD1B-204ENST00000471511 AMOTL1Q8IY63 956 aa11.68□□□□□ -0.54
RPRD1B-204ENST00000471511 ABRAQ8N0Z2 381 aa11.68□□□□□ -0.54
RPRD1B-204ENST00000471511 NEDD1Q8NHV4 660 aa11.68□□□□□ -0.54
RPRD1B-204ENST00000471511 DDRGK1Q96HY6 314 aa11.68□□□□□ -0.54
RPRD1B-204ENST00000471511 YTHDC1Q96MU7 727 aaKnown RBP11.68□□□□□ -0.54
RPRD1B-204ENST00000471511 MMP19Q99542 508 aa11.68□□□□□ -0.54
RPRD1B-204ENST00000471511 FSD1Q9BTV5 496 aa11.68□□□□□ -0.54
RPRD1B-204ENST00000471511 SH2D4AQ9H788 454 aa11.68□□□□□ -0.54
RPRD1B-204ENST00000471511 IL17RBQ9NRM6 502 aa11.68□□□□□ -0.54
RPRD1B-204ENST00000471511 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.68□□□□□ -0.54
RPRD1B-204ENST00000471511 SLC25A27O95847 323 aa11.67□□□□□ -0.54
RPRD1B-204ENST00000471511 SNAI1O95863 264 aaPredicted RBP11.67□□□□□ -0.54
RPRD1B-204ENST00000471511 FCER1AP12319 257 aa11.67□□□□□ -0.54
RPRD1B-204ENST00000471511 PDE1AP54750 535 aa11.67□□□□□ -0.54
RPRD1B-204ENST00000471511 MDM2Q00987 491 aaPredicted RBP11.67□□□□□ -0.54
RPRD1B-204ENST00000471511 TFAP4Q01664 338 aa11.67□□□□□ -0.54
RPRD1B-204ENST00000471511 PPARAQ07869 468 aa11.67□□□□□ -0.54
RPRD1B-204ENST00000471511 GPATCH3Q96I76 525 aa11.67□□□□□ -0.54
RPRD1B-204ENST00000471511 FAM227BQ96M60 508 aa11.67□□□□□ -0.54
RPRD1B-204ENST00000471511 SLF1Q9BQI6 1058 aa11.67□□□□□ -0.54
RPRD1B-204ENST00000471511 RAVER2Q9HCJ3 691 aaKnown RBP11.67□□□□□ -0.54
RPRD1B-204ENST00000471511 GOPCQ9HD26 462 aa11.67□□□□□ -0.54
RPRD1B-204ENST00000471511 DDX49Q9Y6V7 483 aaKnown RBP11.67□□□□□ -0.54
RPRD1B-204ENST00000471511 DNAJC25-GNG10A0A024R161 153 aa11.66□□□□□ -0.54
RPRD1B-204ENST00000471511 A0A0D9SFI3 127 aa11.66□□□□□ -0.54
RPRD1B-204ENST00000471511 SEPT4O43236 478 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms