RNA–Protein interactions for RNA: ENST00000471396.1

TRIM59-204, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-204ENST00000471396 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.11□□□□□ -0.95
TRIM59-204ENST00000471396 PDE4DIPQ5VU43 2346 aa9.1□□□□□ -0.95
TRIM59-204ENST00000471396 IGKV6D-41A0A0C4DH26 115 aa9.1□□□□□ -0.95
TRIM59-204ENST00000471396 ORC4O43929 436 aa9.1□□□□□ -0.95
TRIM59-204ENST00000471396 FGAP02671 866 aa9.1□□□□□ -0.95
TRIM59-204ENST00000471396 EEF2P13639 858 aaKnown RBP9.1□□□□□ -0.95
TRIM59-204ENST00000471396 PRKCSHP14314 528 aaPredicted RBP9.1□□□□□ -0.95
TRIM59-204ENST00000471396 CTGFP29279 349 aa9.1□□□□□ -0.95
TRIM59-204ENST00000471396 PSMC4P43686 418 aa9.1□□□□□ -0.95
TRIM59-204ENST00000471396 PRMT2P55345 433 aa9.1□□□□□ -0.95
TRIM59-204ENST00000471396 HERVK_113P62684 666 aa9.1□□□□□ -0.95
TRIM59-204ENST00000471396 ATP2B2Q01814 1243 aa9.1□□□□□ -0.95
TRIM59-204ENST00000471396 CATSPERGQ6ZRH7 1159 aa9.1□□□□□ -0.95
TRIM59-204ENST00000471396 CCDC136Q96JN2 1154 aa9.1□□□□□ -0.95
TRIM59-204ENST00000471396 TRIM47Q96LD4 638 aa9.1□□□□□ -0.95
TRIM59-204ENST00000471396 VCPKMTQ9H867 229 aa9.1□□□□□ -0.95
TRIM59-204ENST00000471396 MORF4L1Q9UBU8 362 aa9.1□□□□□ -0.95
TRIM59-204ENST00000471396 HTTP42858 3142 aa9.09□□□□□ -0.95
TRIM59-204ENST00000471396 MYH4Q9Y623 1939 aa9.09□□□□□ -0.95
TRIM59-204ENST00000471396 A0A0G2JMZ2 1700 aa9.09□□□□□ -0.95
TRIM59-204ENST00000471396 WDR46O15213 610 aaKnown RBP9.09□□□□□ -0.95
TRIM59-204ENST00000471396 FMNL1O95466 1100 aaPredicted RBP9.09□□□□□ -0.95
TRIM59-204ENST00000471396 TSPY3P0CV98 308 aa9.09□□□□□ -0.95
TRIM59-204ENST00000471396 TSPY8P0CW00 308 aa9.09□□□□□ -0.95
TRIM59-204ENST00000471396 PCP11498 1178 aaKnown RBP9.09□□□□□ -0.95
TRIM59-204ENST00000471396 HOXD10P28358 340 aa9.09□□□□□ -0.95
TRIM59-204ENST00000471396 FOXK1P85037 733 aa9.09□□□□□ -0.95
TRIM59-204ENST00000471396 CTDSPL2Q05D32 466 aa9.09□□□□□ -0.95
TRIM59-204ENST00000471396 KIAA1755Q5JYT7 1200 aa9.09□□□□□ -0.95
TRIM59-204ENST00000471396 NEDD1Q8NHV4 660 aa9.09□□□□□ -0.95
TRIM59-204ENST00000471396 RUFY2Q8WXA3 655 aa9.09□□□□□ -0.95
TRIM59-204ENST00000471396 P2RX7Q99572 595 aaKnown RBP9.09□□□□□ -0.95
TRIM59-204ENST00000471396 DSCC1Q9BVC3 393 aa9.09□□□□□ -0.95
TRIM59-204ENST00000471396 TANGO6Q9C0B7 1094 aa9.09□□□□□ -0.95
TRIM59-204ENST00000471396 RPAP3Q9H6T3 665 aaPredicted RBP9.09□□□□□ -0.95
TRIM59-204ENST00000471396 GOPCQ9HD26 462 aa9.09□□□□□ -0.95
TRIM59-204ENST00000471396 SCUBE2Q9NQ36 999 aa9.09□□□□□ -0.95
TRIM59-204ENST00000471396 NYAP2Q9P242 653 aa9.09□□□□□ -0.95
TRIM59-204ENST00000471396 SYNPO2Q9UMS6 1093 aa9.09□□□□□ -0.95
TRIM59-204ENST00000471396 RLFQ13129 1914 aa9.09□□□□□ -0.95
TRIM59-204ENST00000471396 MYPNQ86TC9 1320 aa9.08□□□□□ -0.96
TRIM59-204ENST00000471396 PARP14Q460N5 1801 aa9.08□□□□□ -0.96
TRIM59-204ENST00000471396 CCDC85CA6NKD9 419 aa9.08□□□□□ -0.96
TRIM59-204ENST00000471396 SPDYE16A6NNV3 312 aaPredicted RBP9.08□□□□□ -0.96
TRIM59-204ENST00000471396 TNPO2O14787 897 aaKnown RBP9.08□□□□□ -0.96
TRIM59-204ENST00000471396 FGRP09769 529 aa9.08□□□□□ -0.96
TRIM59-204ENST00000471396 CHMLP26374 656 aa9.08□□□□□ -0.96
TRIM59-204ENST00000471396 HAND2P61296 217 aa9.08□□□□□ -0.96
TRIM59-204ENST00000471396 TFAP4Q01664 338 aa9.08□□□□□ -0.96
TRIM59-204ENST00000471396 FAM47AQ5JRC9 791 aa9.08□□□□□ -0.96
TRIM59-204ENST00000471396 PPP4R3BQ5MIZ7 849 aa9.08□□□□□ -0.96
TRIM59-204ENST00000471396 LBX2Q6XYB7 198 aa9.08□□□□□ -0.96
TRIM59-204ENST00000471396 TBC1D10CQ8IV04 446 aa9.08□□□□□ -0.96
TRIM59-204ENST00000471396 PLPP6Q8IY26 295 aa9.08□□□□□ -0.96
TRIM59-204ENST00000471396 SPICE1Q8N0Z3 855 aa9.08□□□□□ -0.96
TRIM59-204ENST00000471396 GPRC5AQ8NFJ5 357 aa9.08□□□□□ -0.96
TRIM59-204ENST00000471396 ARMC5Q96C12 935 aa9.08□□□□□ -0.96
TRIM59-204ENST00000471396 CEP95Q96GE4 821 aa9.08□□□□□ -0.96
TRIM59-204ENST00000471396 PAGR1Q9BTK6 254 aa9.08□□□□□ -0.96
TRIM59-204ENST00000471396 NBPF3Q9H094 633 aa9.08□□□□□ -0.96
TRIM59-204ENST00000471396 IL25Q9H293 177 aa9.08□□□□□ -0.96
TRIM59-204ENST00000471396 TXNRD2Q9NNW7 524 aa9.08□□□□□ -0.96
TRIM59-204ENST00000471396 MTMR4Q9NYA4 1195 aa9.08□□□□□ -0.96
TRIM59-204ENST00000471396 SRRDQ9UH36 339 aa9.08□□□□□ -0.96
TRIM59-204ENST00000471396 PTCH2Q9Y6C5 1203 aa9.08□□□□□ -0.96
TRIM59-204ENST00000471396 TSPY2A6NKD2 308 aa9.07□□□□□ -0.96
TRIM59-204ENST00000471396 RAD21O60216 631 aa9.07□□□□□ -0.96
TRIM59-204ENST00000471396 RANBP6O60518 1105 aaKnown RBP9.07□□□□□ -0.96
TRIM59-204ENST00000471396 TTLL1O95922 423 aa9.07□□□□□ -0.96
TRIM59-204ENST00000471396 NDUFB10O96000 172 aa9.07□□□□□ -0.96
TRIM59-204ENST00000471396 ERVK-9P63128 1117 aa9.07□□□□□ -0.96
TRIM59-204ENST00000471396 ERVK-24P63145 666 aa9.07□□□□□ -0.96
TRIM59-204ENST00000471396 PRKCZQ05513 592 aa9.07□□□□□ -0.96
TRIM59-204ENST00000471396 TPRNQ4KMQ1 711 aa9.07□□□□□ -0.96
TRIM59-204ENST00000471396 BMP2KLQ5H9B9 411 aa9.07□□□□□ -0.96
TRIM59-204ENST00000471396 AKNAD1Q5T1N1 836 aa9.07□□□□□ -0.96
TRIM59-204ENST00000471396 POTEEQ6S8J3 1075 aa9.07□□□□□ -0.96
TRIM59-204ENST00000471396 SKAP1Q86WV1 359 aa9.07□□□□□ -0.96
TRIM59-204ENST00000471396 LRRC47Q8N1G4 583 aaKnown RBP9.07□□□□□ -0.96
TRIM59-204ENST00000471396 STAG1Q8WVM7 1258 aa9.07□□□□□ -0.96
TRIM59-204ENST00000471396 COA7Q96BR5 231 aa9.07□□□□□ -0.96
TRIM59-204ENST00000471396 RNF41Q9H4P4 317 aaPredicted RBP9.07□□□□□ -0.96
TRIM59-204ENST00000471396 INCENPQ9NQS7 918 aa9.07□□□□□ -0.96
TRIM59-204ENST00000471396 TOMM22Q9NS69 142 aa9.07□□□□□ -0.96
TRIM59-204ENST00000471396 RBPJLQ9UBG7 517 aa9.07□□□□□ -0.96
TRIM59-204ENST00000471396 CLIP2Q9UDT6 1046 aa9.07□□□□□ -0.96
TRIM59-204ENST00000471396 CTNNA3Q9UI47 895 aa9.07□□□□□ -0.96
TRIM59-204ENST00000471396 RABGAP1Q9Y3P9 1069 aa9.07□□□□□ -0.96
TRIM59-204ENST00000471396 TACC3Q9Y6A5 838 aa9.07□□□□□ -0.96
TRIM59-204ENST00000471396 ZNF213O14771 459 aa9.06□□□□□ -0.96
TRIM59-204ENST00000471396 SGSM2O43147 1006 aa9.06□□□□□ -0.96
TRIM59-204ENST00000471396 PEX10O60683 326 aa9.06□□□□□ -0.96
TRIM59-204ENST00000471396 CNMDO75829 334 aa9.06□□□□□ -0.96
TRIM59-204ENST00000471396 FLOT1O75955 427 aa9.06□□□□□ -0.96
TRIM59-204ENST00000471396 MAPK4P31152 587 aa9.06□□□□□ -0.96
TRIM59-204ENST00000471396 FLT3LGP49771 235 aa9.06□□□□□ -0.96
TRIM59-204ENST00000471396 NT5C2P49902 561 aa9.06□□□□□ -0.96
TRIM59-204ENST00000471396 CCNA1P78396 465 aa9.06□□□□□ -0.96
TRIM59-204ENST00000471396 COG2Q14746 738 aa9.06□□□□□ -0.96
TRIM59-204ENST00000471396 IMMTQ16891 758 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms