RNA–Protein interactions for RNA: ENST00000471357.1

LINC00880-201, long intergenic non-protein coding RNA 880, humanhuman

TSL 1 (best) BASIC

Gene LINC00880, Length 2,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00880-201ENST00000471357 SLFN13Q68D06 897 aa13.8□□□□□ -0.2
LINC00880-201ENST00000471357 GMCL1P1Q8NEA9 526 aa13.8□□□□□ -0.2
LINC00880-201ENST00000471357 DCAF4Q8WV16 495 aa13.8□□□□□ -0.2
LINC00880-201ENST00000471357 SHISA4Q96DD7 197 aa13.8□□□□□ -0.2
LINC00880-201ENST00000471357 PHF20Q9BVI0 1012 aa13.8□□□□□ -0.2
LINC00880-201ENST00000471357 UBA5Q9GZZ9 404 aa13.8□□□□□ -0.2
LINC00880-201ENST00000471357 CPVLQ9H3G5 476 aa13.8□□□□□ -0.2
LINC00880-201ENST00000471357 RIOX1Q9H6W3 641 aa13.8□□□□□ -0.2
LINC00880-201ENST00000471357 ARHGEF10LQ9HCE6 1279 aa13.8□□□□□ -0.2
LINC00880-201ENST00000471357 GPCPD1Q9NPB8 672 aa13.8□□□□□ -0.2
LINC00880-201ENST00000471357 PPP2R3BQ9Y5P8 575 aa13.8□□□□□ -0.2
LINC00880-201ENST00000471357 ZC3H4Q9UPT8 1303 aaKnown RBP13.8□□□□□ -0.2
LINC00880-201ENST00000471357 PHF20L1A8MW92 1017 aa13.8□□□□□ -0.2
LINC00880-201ENST00000471357 BTBD18B2RXH4 712 aa13.8□□□□□ -0.2
LINC00880-201ENST00000471357 F5H6K3 240 aa13.8□□□□□ -0.2
LINC00880-201ENST00000471357 RAD21O60216 631 aa13.8□□□□□ -0.2
LINC00880-201ENST00000471357 KLRC3Q07444 240 aa13.8□□□□□ -0.2
LINC00880-201ENST00000471357 CCDC96Q2M329 555 aa13.8□□□□□ -0.2
LINC00880-201ENST00000471357 KLHL40Q2TBA0 621 aa13.8□□□□□ -0.2
LINC00880-201ENST00000471357 DCAF15Q66K64 600 aa13.8□□□□□ -0.2
LINC00880-201ENST00000471357 RRP36Q96EU6 259 aaKnown RBP13.8□□□□□ -0.2
LINC00880-201ENST00000471357 SPATA32Q96LK8 384 aa13.8□□□□□ -0.2
LINC00880-201ENST00000471357 FOXP1Q9H334 677 aaPredicted RBP13.8□□□□□ -0.2
LINC00880-201ENST00000471357 VAT1LQ9HCJ6 419 aa13.8□□□□□ -0.2
LINC00880-201ENST00000471357 SH3GLB2Q9NR46 395 aa13.8□□□□□ -0.2
LINC00880-201ENST00000471357 SRCAPQ6ZRS2 3230 aa13.79□□□□□ -0.2
LINC00880-201ENST00000471357 ELP1O95163 1332 aa13.79□□□□□ -0.2
LINC00880-201ENST00000471357 PITPNM2Q9BZ72 1349 aa13.79□□□□□ -0.2
LINC00880-201ENST00000471357 A0A1W2PRG0 241 aa13.79□□□□□ -0.2
LINC00880-201ENST00000471357 ASNSP08243 561 aa13.79□□□□□ -0.2
LINC00880-201ENST00000471357 VEGFAP15692 232 aaPredicted RBP13.79□□□□□ -0.2
LINC00880-201ENST00000471357 SLC1A4P43007 532 aa13.79□□□□□ -0.2
LINC00880-201ENST00000471357 L3MBTL3Q96JM7 780 aaPredicted RBP13.79□□□□□ -0.2
LINC00880-201ENST00000471357 USP28Q96RU2 1077 aa13.79□□□□□ -0.2
LINC00880-201ENST00000471357 GADD45BO75293 160 aaPredicted RBP13.78□□□□□ -0.2
LINC00880-201ENST00000471357 MBD3O95983 291 aa13.78□□□□□ -0.2
LINC00880-201ENST00000471357 NLRP5P59047 1200 aa13.78□□□□□ -0.2
LINC00880-201ENST00000471357 KCTD1Q719H9 257 aa13.78□□□□□ -0.2
LINC00880-201ENST00000471357 NOSTRINQ8IVI9 506 aa13.78□□□□□ -0.2
LINC00880-201ENST00000471357 LEO1Q8WVC0 666 aaPredicted RBP13.78□□□□□ -0.2
LINC00880-201ENST00000471357 GMCL1Q96IK5 515 aa13.78□□□□□ -0.2
LINC00880-201ENST00000471357 BRMS1Q9HCU9 246 aa13.78□□□□□ -0.2
LINC00880-201ENST00000471357 GINM1Q9NU53 330 aa13.78□□□□□ -0.2
LINC00880-201ENST00000471357 SEC63Q9UGP8 760 aaKnown RBP13.78□□□□□ -0.2
LINC00880-201ENST00000471357 TMX2Q9Y320 296 aa13.78□□□□□ -0.2
LINC00880-201ENST00000471357 NDUFB10O96000 172 aa13.78□□□□□ -0.2
LINC00880-201ENST00000471357 KRT2P35908 639 aa13.78□□□□□ -0.2
LINC00880-201ENST00000471357 ECE1P42892 770 aa13.78□□□□□ -0.2
LINC00880-201ENST00000471357 UBE2HP62256 183 aa13.78□□□□□ -0.2
LINC00880-201ENST00000471357 CEBPZQ03701 1054 aaKnown RBP13.78□□□□□ -0.2
LINC00880-201ENST00000471357 PRAMEF18Q5VWM3 479 aa13.78□□□□□ -0.2
LINC00880-201ENST00000471357 TTBK2Q6IQ55 1244 aa13.78□□□□□ -0.2
LINC00880-201ENST00000471357 HOMER1Q86YM7 354 aa13.78□□□□□ -0.2
LINC00880-201ENST00000471357 GPT2Q8TD30 523 aa13.78□□□□□ -0.2
LINC00880-201ENST00000471357 ACER1Q8TDN7 264 aa13.78□□□□□ -0.2
LINC00880-201ENST00000471357 GPKOWQ92917 476 aaPredicted RBP eCLIP13.78□□□□□ -0.2
LINC00880-201ENST00000471357 PIGSQ96S52 555 aa13.78□□□□□ -0.2
LINC00880-201ENST00000471357 ZNF341Q9BYN7 854 aa13.78□□□□□ -0.2
LINC00880-201ENST00000471357 ISY1Q9ULR0 285 aaKnown RBP13.78□□□□□ -0.2
LINC00880-201ENST00000471357 GLTPD2A6NH11 291 aa13.77□□□□□ -0.21
LINC00880-201ENST00000471357 CTNND1O60716 968 aaKnown RBP13.77□□□□□ -0.21
LINC00880-201ENST00000471357 WWC2Q6AWC2 1192 aa13.77□□□□□ -0.21
LINC00880-201ENST00000471357 HEATR3Q7Z4Q2 680 aa13.77□□□□□ -0.21
LINC00880-201ENST00000471357 ADGRF4Q8IZF3 695 aa13.77□□□□□ -0.21
LINC00880-201ENST00000471357 FAM177A1Q8N128 213 aaPredicted RBP13.77□□□□□ -0.21
LINC00880-201ENST00000471357 CCDC148Q8NFR7 591 aa13.77□□□□□ -0.21
LINC00880-201ENST00000471357 OXER1Q8TDS5 423 aa13.77□□□□□ -0.21
LINC00880-201ENST00000471357 FTOQ9C0B1 505 aaKnown RBP eCLIP13.77□□□□□ -0.21
LINC00880-201ENST00000471357 BARHL2Q9NY43 387 aa13.77□□□□□ -0.21
LINC00880-201ENST00000471357 RTEL1Q9NZ71 1219 aa13.77□□□□□ -0.21
LINC00880-201ENST00000471357 RCOR1Q9UKL0 485 aa13.77□□□□□ -0.21
LINC00880-201ENST00000471357 MYH15Q9Y2K3 1946 aa13.77□□□□□ -0.21
LINC00880-201ENST00000471357 CALML3P27482 149 aa13.76□□□□□ -0.21
LINC00880-201ENST00000471357 SLC16A2P36021 539 aa13.76□□□□□ -0.21
LINC00880-201ENST00000471357 NR5A1Q13285 461 aa13.76□□□□□ -0.21
LINC00880-201ENST00000471357 USP50Q70EL3 339 aaPredicted RBP13.76□□□□□ -0.21
LINC00880-201ENST00000471357 DCPSQ96C86 337 aaKnown RBP13.76□□□□□ -0.21
LINC00880-201ENST00000471357 SH2D4AQ9H788 454 aa13.76□□□□□ -0.21
LINC00880-201ENST00000471357 GOPCQ9HD26 462 aa13.76□□□□□ -0.21
LINC00880-201ENST00000471357 POLR3EQ9NVU0 708 aa13.76□□□□□ -0.21
LINC00880-201ENST00000471357 STXBP3O00186 592 aa13.76□□□□□ -0.21
LINC00880-201ENST00000471357 BMP3P12645 472 aa13.76□□□□□ -0.21
LINC00880-201ENST00000471357 NPY5RQ15761 445 aa13.76□□□□□ -0.21
LINC00880-201ENST00000471357 SUPT20HL1Q3ZLR7 823 aa13.76□□□□□ -0.21
LINC00880-201ENST00000471357 JMJD4Q9H9V9 463 aa13.76□□□□□ -0.21
LINC00880-201ENST00000471357 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.76□□□□□ -0.21
LINC00880-201ENST00000471357 ZNF112Q9UJU3 913 aa13.76□□□□□ -0.21
LINC00880-201ENST00000471357 PNMA6FA0A0J9YX94 578 aa13.75□□□□□ -0.21
LINC00880-201ENST00000471357 GOLGA6L4A6NEF3 574 aa13.75□□□□□ -0.21
LINC00880-201ENST00000471357 hCG_1984214I3L0E3 225 aa13.75□□□□□ -0.21
LINC00880-201ENST00000471357 EPHX2P34913 555 aa13.75□□□□□ -0.21
LINC00880-201ENST00000471357 TYW1BQ6NUM6 668 aa13.75□□□□□ -0.21
LINC00880-201ENST00000471357 ZNF713Q8N859 430 aaPredicted RBP13.75□□□□□ -0.21
LINC00880-201ENST00000471357 CCDC12Q8WUD4 166 aaPredicted RBP13.75□□□□□ -0.21
LINC00880-201ENST00000471357 CLIC4Q9Y696 253 aa13.75□□□□□ -0.21
LINC00880-201ENST00000471357 SOCS7O14512 581 aa13.74□□□□□ -0.21
LINC00880-201ENST00000471357 YEATS4O95619 227 aa13.74□□□□□ -0.21
LINC00880-201ENST00000471357 INPP5BP32019 993 aa13.74□□□□□ -0.21
LINC00880-201ENST00000471357 NASPP49321 788 aaPredicted RBP13.74□□□□□ -0.21
LINC00880-201ENST00000471357 NAPAP54920 295 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms