RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 TBX2Q13207 712 aaPredicted RBP4.72□□□□□ -1.65
VPS50-210ENST00000471188 HSP90AB4PQ58FF6 505 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 TTMPQ5BVD1 217 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 MEX3CQ5U5Q3 659 aaKnown RBP4.72□□□□□ -1.65
VPS50-210ENST00000471188 CCDC102BQ68D86 513 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 TRIM68Q6AZZ1 485 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 CHST3Q7LGC8 479 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 MAATS1Q7Z4T9 603 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 YTHDF3Q7Z739 585 aaKnown RBP4.72□□□□□ -1.65
VPS50-210ENST00000471188 RAB11FIP4Q86YS3 637 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 NUTM2AQ8IVF1 878 aaPredicted RBP4.72□□□□□ -1.65
VPS50-210ENST00000471188 DRAXINQ8NBI3 349 aaPredicted RBP4.72□□□□□ -1.65
VPS50-210ENST00000471188 OR8K1Q8NGG5 319 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 RBM46Q8TBY0 533 aaKnown RBP4.72□□□□□ -1.65
VPS50-210ENST00000471188 EZH1Q92800 747 aaPredicted RBP4.72□□□□□ -1.65
VPS50-210ENST00000471188 JAKMIP2Q96AA8 810 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 OSBPL9Q96SU4 736 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 TEX13AQ9BXU3 409 aaPredicted RBP4.72□□□□□ -1.65
VPS50-210ENST00000471188 TSGA10Q9BZW7 698 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 TMEM165Q9HC07 324 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 HOMER3Q9NSC5 361 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 RTEL1Q9NZ71 1219 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 CABP1Q9NZU7 370 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 COL3A1P02461 1466 aaPredicted RBP4.72□□□□□ -1.65
VPS50-210ENST00000471188 UNC13BO14795 1591 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 ATXN2Q99700 1313 aaKnown RBP4.72□□□□□ -1.65
VPS50-210ENST00000471188 ZC3H4Q9UPT8 1303 aaKnown RBP4.72□□□□□ -1.65
VPS50-210ENST00000471188 ARHGAP5Q13017 1502 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 TESPA1A2RU30 521 aaPredicted RBP4.72□□□□□ -1.65
VPS50-210ENST00000471188 RCCD1A6NED2 376 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 GOLGA6L10A6NI86 522 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 CHL1O00533 1208 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 ZNF185O15231 689 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 ATP1A1P05023 1023 aaKnown RBP4.72□□□□□ -1.65
VPS50-210ENST00000471188 ATP5JP18859 108 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 PTGISQ16647 500 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 LRRC23Q53EV4 343 aaPredicted RBP4.72□□□□□ -1.65
VPS50-210ENST00000471188 CCDC122Q5T0U0 273 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 CDCA2Q69YH5 1023 aaPredicted RBP4.72□□□□□ -1.65
VPS50-210ENST00000471188 IQCEQ6IPM2 695 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 MIS18BP1Q6P0N0 1132 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 RASGRP2Q7LDG7 609 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 CPLX4Q7Z7G2 160 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 GPIHBP1Q8IV16 184 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 MAB21L3Q8N8X9 362 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 SSH3Q8TE77 659 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 CUL5Q93034 780 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 PANX2Q96RD6 677 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 PSMB7Q99436 277 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 NAA15Q9BXJ9 866 aaKnown RBP4.72□□□□□ -1.65
VPS50-210ENST00000471188 USP44Q9H0E7 712 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 GJB4Q9NTQ9 266 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 HMG20BQ9P0W2 317 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 TFR2Q9UP52 801 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 CDK12Q9NYV4 1490 aaPredicted RBP4.72□□□□□ -1.65
VPS50-210ENST00000471188 NRXN1Q9ULB1 1477 aa4.72□□□□□ -1.65
VPS50-210ENST00000471188 DNM1LO00429 736 aa4.71□□□□□ -1.65
VPS50-210ENST00000471188 CPLX1O14810 134 aa4.71□□□□□ -1.65
VPS50-210ENST00000471188 ATP6V1G2O95670 118 aa4.71□□□□□ -1.65
VPS50-210ENST00000471188 CDC27P30260 824 aa4.71□□□□□ -1.65
VPS50-210ENST00000471188 CCT6AP40227 531 aaKnown RBP4.71□□□□□ -1.65
VPS50-210ENST00000471188 SCTRP47872 440 aa4.71□□□□□ -1.65
VPS50-210ENST00000471188 MXRA7P84157 204 aa4.71□□□□□ -1.65
VPS50-210ENST00000471188 DRP2Q13474 957 aa4.71□□□□□ -1.65
VPS50-210ENST00000471188 NBPF14Q5TI25 921 aa4.71□□□□□ -1.65
VPS50-210ENST00000471188 TTLL7Q6ZT98 887 aa4.71□□□□□ -1.65
VPS50-210ENST00000471188 TBC1D1Q86TI0 1168 aaPredicted RBP4.71□□□□□ -1.65
VPS50-210ENST00000471188 ZNF589Q86UQ0 364 aaPredicted RBP4.71□□□□□ -1.65
VPS50-210ENST00000471188 CNGA4Q8IV77 575 aa4.71□□□□□ -1.65
VPS50-210ENST00000471188 CACNA2D3Q8IZS8 1091 aa4.71□□□□□ -1.65
VPS50-210ENST00000471188 DYDC1Q8WWB3 177 aa4.71□□□□□ -1.65
VPS50-210ENST00000471188 IFT81Q8WYA0 676 aa4.71□□□□□ -1.65
VPS50-210ENST00000471188 CYFIP2Q96F07 1278 aa4.71□□□□□ -1.65
VPS50-210ENST00000471188 CCDC43Q96MW1 224 aaKnown RBP4.71□□□□□ -1.65
VPS50-210ENST00000471188 PSMD1Q99460 953 aa4.71□□□□□ -1.65
VPS50-210ENST00000471188 NUP58Q9BVL2 599 aa4.71□□□□□ -1.65
VPS50-210ENST00000471188 TRIM4Q9C037 500 aa4.71□□□□□ -1.65
VPS50-210ENST00000471188 C15orf41Q9Y2V0 281 aa4.71□□□□□ -1.65
VPS50-210ENST00000471188 CAMSAP1Q5T5Y3 1602 aa4.71□□□□□ -1.65
VPS50-210ENST00000471188 LMTK2Q8IWU2 1503 aa4.71□□□□□ -1.65
VPS50-210ENST00000471188 TARSL2A2RTX5 802 aaKnown RBP4.71□□□□□ -1.66
VPS50-210ENST00000471188 LGR5O75473 907 aa4.71□□□□□ -1.66
VPS50-210ENST00000471188 RTN3O95197 1032 aaPredicted RBP4.71□□□□□ -1.66
VPS50-210ENST00000471188 YEATS4O95619 227 aa4.71□□□□□ -1.66
VPS50-210ENST00000471188 FAM107AO95990 144 aa4.71□□□□□ -1.66
VPS50-210ENST00000471188 IDEP14735 1019 aa4.71□□□□□ -1.66
VPS50-210ENST00000471188 CMA1P23946 247 aa4.71□□□□□ -1.66
VPS50-210ENST00000471188 KIF5BP33176 963 aa4.71□□□□□ -1.66
VPS50-210ENST00000471188 SKOR1P84550 965 aa4.71□□□□□ -1.66
VPS50-210ENST00000471188 KCNC4Q03721 635 aa4.71□□□□□ -1.66
VPS50-210ENST00000471188 FMR1Q06787 632 aaKnown RBP eCLIP4.71□□□□□ -1.66
VPS50-210ENST00000471188 EZH2Q15910 746 aaKnown RBP4.71□□□□□ -1.66
VPS50-210ENST00000471188 SLC5A9Q2M3M2 681 aa4.71□□□□□ -1.66
VPS50-210ENST00000471188 SPRED3Q2MJR0 410 aa4.71□□□□□ -1.66
VPS50-210ENST00000471188 ANKRD20A8PQ5CZ79 823 aa4.71□□□□□ -1.66
VPS50-210ENST00000471188 ANO1Q5XXA6 986 aa4.71□□□□□ -1.66
VPS50-210ENST00000471188 MAEAQ7L5Y9 396 aa4.71□□□□□ -1.66
VPS50-210ENST00000471188 TMTC1Q8IUR5 882 aa4.71□□□□□ -1.66
VPS50-210ENST00000471188 CCDC63Q8NA47 563 aa4.71□□□□□ -1.66
VPS50-210ENST00000471188 TSEN2Q8NCE0 465 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms