RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 C16orf87Q6PH81 154 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 SSH1Q8WYL5 1049 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 LZICQ8WZA0 190 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 TRAIPQ9BWF2 469 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 MRPL44Q9H9J2 332 aaKnown RBP7.56□□□□□ -1.2
BRCA1-210ENST00000471181 G3BP2Q9UN86 482 aaKnown RBP7.56□□□□□ -1.2
BRCA1-210ENST00000471181 ATAD2Q6PL18 1390 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 STK25O00506 426 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 YWHAGP61981 247 aaKnown RBP eCLIP7.56□□□□□ -1.2
BRCA1-210ENST00000471181 PPP2R5EQ16537 467 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 GLE1Q53GS7 698 aaKnown RBP7.56□□□□□ -1.2
BRCA1-210ENST00000471181 HABP4Q5JVS0 413 aaKnown RBP7.56□□□□□ -1.2
BRCA1-210ENST00000471181 PDZD4Q76G19 769 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-210ENST00000471181 TEX9Q8N6V9 391 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 RDH13Q8NBN7 331 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 GRK7Q8WTQ7 553 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 TEX13AQ9BXU3 409 aaPredicted RBP7.56□□□□□ -1.2
BRCA1-210ENST00000471181 TRPC6Q9Y210 931 aa7.56□□□□□ -1.2
BRCA1-210ENST00000471181 SKIP12755 728 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 NMIQ13287 307 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-210ENST00000471181 USH1GQ495M9 461 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 ADAT2Q7Z6V5 191 aaKnown RBP7.55□□□□□ -1.2
BRCA1-210ENST00000471181 HAUS1Q96CS2 278 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 TTC1Q99614 292 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 DPH5Q9H2P9 285 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 TAB2Q9NYJ8 693 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 FBXO2Q9UK22 296 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-210ENST00000471181 MRFAP1Q9Y605 127 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 A0A1B0GVL5 298 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 EFCAB14O75071 495 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 ESRRBO95718 433 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 ABCB4P21439 1286 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 LMNB2Q03252 620 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 ALDH1L2Q3SY69 923 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 TTBK2Q6IQ55 1244 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 ZNF280CQ8ND82 737 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 GDAP1Q8TB36 358 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 SLC8A1P32418 973 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 HADHQ16836 314 aaKnown RBP7.55□□□□□ -1.2
BRCA1-210ENST00000471181 TYW1BQ6NUM6 668 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 TMTC3Q6ZXV5 915 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 PPHLN1Q8NEY8 458 aaKnown RBP7.55□□□□□ -1.2
BRCA1-210ENST00000471181 NCLNQ969V3 563 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 NRBF2Q96F24 287 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 MTRQ99707 1265 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 TXLNGQ9NUQ3 528 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 MKL2Q9ULH7 1088 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 GOLGA8QA0A0J9YX86 632 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 GOLGA8OA6NCC3 632 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 GOLGA8NF8WBI6 632 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 ZNF263O14978 683 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 LDHBP07195 334 aaKnown RBP7.55□□□□□ -1.2
BRCA1-210ENST00000471181 GFAPP14136 432 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 PLCG2P16885 1265 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 CARSP49589 748 aaKnown RBP7.55□□□□□ -1.2
BRCA1-210ENST00000471181 YWHAHQ04917 246 aaPredicted RBP7.55□□□□□ -1.2
BRCA1-210ENST00000471181 PRPF38AQ8NAV1 312 aaKnown RBP7.55□□□□□ -1.2
BRCA1-210ENST00000471181 NLRP3Q96P20 1036 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 LSM14BQ9BX40 385 aaKnown RBP7.55□□□□□ -1.2
BRCA1-210ENST00000471181 ZC3H12CQ9C0D7 883 aaKnown RBP7.55□□□□□ -1.2
BRCA1-210ENST00000471181 MOSPD1Q9UJG1 213 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 AMFRQ9UKV5 643 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 INTUQ9ULD6 942 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 GAPVD1Q14C86 1478 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 KIAA0556O60303 1618 aa7.55□□□□□ -1.2
BRCA1-210ENST00000471181 DKC1O60832 514 aaKnown RBP eCLIP7.54□□□□□ -1.2
BRCA1-210ENST00000471181 RLBP1P12271 317 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 BRD2P25440 801 aaKnown RBP7.54□□□□□ -1.2
BRCA1-210ENST00000471181 MAGEA1P43355 309 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 PRIM1P49642 420 aaKnown RBP7.54□□□□□ -1.2
BRCA1-210ENST00000471181 LIG3P49916 1009 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 PDE1BQ01064 536 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 SLFN5Q08AF3 891 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 KRT27Q7Z3Y8 459 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 TAGAPQ8N103 731 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 CEP70Q8NHQ1 597 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 MYCBPQ99417 103 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-210ENST00000471181 ARHGEF10LQ9HCE6 1279 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 CFLARO15519 480 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 ADCY1Q08828 1119 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 PAK1Q13153 545 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 FAM102BQ5T8I3 360 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 CC2D2BQ6DHV5 1058 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 RINT1Q6NUQ1 792 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 SMAP1Q8IYB5 467 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-210ENST00000471181 SCYL3Q8IZE3 742 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 CSRNP1Q96S65 589 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 PAG1Q9NWQ8 432 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 NIP7Q9Y221 180 aaKnown RBP eCLIP7.54□□□□□ -1.2
BRCA1-210ENST00000471181 INPP5FQ9Y2H2 1132 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 ADCY10Q96PN6 1610 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 TYW5A2RUC4 315 aaKnown RBP7.54□□□□□ -1.2
BRCA1-210ENST00000471181 POC1B-GALNT4F8VUJ3 575 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 H7C0C1 242 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 ARHGAP6O43182 974 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 FLOT1O75955 427 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 ATF2P15336 505 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 ZFXP17010 805 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-210ENST00000471181 GNAT2P19087 354 aa7.54□□□□□ -1.2
BRCA1-210ENST00000471181 ATP5OP48047 213 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms