RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 LCHNA4D1U4 455 aa7.35□□□□□ -1.23
VARS-222ENST00000470953 CNMDO75829 334 aa7.35□□□□□ -1.23
VARS-222ENST00000470953 LMNAP02545 664 aaKnown RBP7.35□□□□□ -1.23
VARS-222ENST00000470953 ZNF853P0CG23 659 aa7.35□□□□□ -1.23
VARS-222ENST00000470953 PRDX5P30044 214 aa7.35□□□□□ -1.23
VARS-222ENST00000470953 CCL23P55773 120 aa7.35□□□□□ -1.23
VARS-222ENST00000470953 IRX3P78415 501 aaPredicted RBP7.35□□□□□ -1.23
VARS-222ENST00000470953 JAG1P78504 1218 aa7.35□□□□□ -1.23
VARS-222ENST00000470953 PABPC4Q13310 644 aaKnown RBP eCLIP7.35□□□□□ -1.235e-9■■□□□ 11.6
VARS-222ENST00000470953 TTLL4Q14679 1199 aa7.35□□□□□ -1.23
VARS-222ENST00000470953 CLUL1Q15846 466 aa7.35□□□□□ -1.23
VARS-222ENST00000470953 CCDC184Q52MB2 194 aa7.35□□□□□ -1.23
VARS-222ENST00000470953 SH3D19Q5HYK7 790 aa7.35□□□□□ -1.23
VARS-222ENST00000470953 LRSAM1Q6UWE0 723 aa7.35□□□□□ -1.23
VARS-222ENST00000470953 VPS37DQ86XT2 251 aa7.35□□□□□ -1.23
VARS-222ENST00000470953 CHMP4AQ9BY43 222 aa7.35□□□□□ -1.23
VARS-222ENST00000470953 SUGCTQ9HAC7 445 aa7.35□□□□□ -1.23
VARS-222ENST00000470953 CWC22Q9HCG8 908 aaKnown RBP7.35□□□□□ -1.23
VARS-222ENST00000470953 XPNPEP3Q9NQH7 507 aa7.35□□□□□ -1.23
VARS-222ENST00000470953 MTUS1Q9ULD2 1270 aa7.35□□□□□ -1.23
VARS-222ENST00000470953 SALL2Q9Y467 1007 aaPredicted RBP7.35□□□□□ -1.23
VARS-222ENST00000470953 SMCHD1A6NHR9 2005 aa7.35□□□□□ -1.23
VARS-222ENST00000470953 RFX7Q2KHR2 1363 aa7.34□□□□□ -1.23
VARS-222ENST00000470953 MAST3O60307 1309 aa7.34□□□□□ -1.23
VARS-222ENST00000470953 TNKSO95271 1327 aa7.34□□□□□ -1.23
VARS-222ENST00000470953 NBEAQ8NFP9 2946 aa7.34□□□□□ -1.23
VARS-222ENST00000470953 STXBP3O00186 592 aa7.34□□□□□ -1.23
VARS-222ENST00000470953 HOXC6P09630 235 aa7.34□□□□□ -1.23
VARS-222ENST00000470953 HOXA7P31268 230 aaPredicted RBP7.34□□□□□ -1.23
VARS-222ENST00000470953 MTMR2Q13614 643 aa7.34□□□□□ -1.23
VARS-222ENST00000470953 SHROOM1Q2M3G4 852 aaPredicted RBP7.34□□□□□ -1.23
VARS-222ENST00000470953 CCDC57Q2TAC2 916 aa7.34□□□□□ -1.23
VARS-222ENST00000470953 PRR23BQ6ZRT6 265 aa7.34□□□□□ -1.23
VARS-222ENST00000470953 RNF180Q86T96 592 aa7.34□□□□□ -1.23
VARS-222ENST00000470953 ZSCAN29Q8IWY8 852 aaPredicted RBP7.34□□□□□ -1.23
VARS-222ENST00000470953 PABPC5Q96DU9 382 aaKnown RBP7.34□□□□□ -1.23
VARS-222ENST00000470953 IDI2Q9BXS1 227 aa7.34□□□□□ -1.23
VARS-222ENST00000470953 STK31Q9BXU1 1019 aa7.34□□□□□ -1.23
VARS-222ENST00000470953 SUGT1Q9Y2Z0 365 aa7.34□□□□□ -1.23
VARS-222ENST00000470953 PCDHGC5Q9Y5F6 944 aa7.34□□□□□ -1.23
VARS-222ENST00000470953 MBTPS2O43462 519 aa7.33□□□□□ -1.24
VARS-222ENST00000470953 ENTPD3O75355 529 aa7.33□□□□□ -1.24
VARS-222ENST00000470953 PTPREP23469 700 aa7.33□□□□□ -1.24
VARS-222ENST00000470953 CDK7P50613 346 aa7.33□□□□□ -1.24
VARS-222ENST00000470953 ACLYP53396 1101 aa7.33□□□□□ -1.24
VARS-222ENST00000470953 MKRN4PQ13434 485 aaPredicted RBP7.33□□□□□ -1.24
VARS-222ENST00000470953 PICALMQ13492 652 aa7.33□□□□□ -1.24
VARS-222ENST00000470953 LRRC24Q50LG9 513 aa7.33□□□□□ -1.24
VARS-222ENST00000470953 TAF7LQ5H9L4 462 aa7.33□□□□□ -1.24
VARS-222ENST00000470953 WDR78Q5VTH9 848 aa7.33□□□□□ -1.24
VARS-222ENST00000470953 CCDC30Q5VVM6 783 aa7.33□□□□□ -1.24
VARS-222ENST00000470953 TSR2Q969E8 191 aaKnown RBP7.33□□□□□ -1.24
VARS-222ENST00000470953 LENG1Q96BZ8 264 aaPredicted RBP7.33□□□□□ -1.24
VARS-222ENST00000470953 RIPOR3Q96MK2 946 aa7.33□□□□□ -1.24
VARS-222ENST00000470953 WNT8AQ9H1J5 351 aa7.33□□□□□ -1.24
VARS-222ENST00000470953 ZMIZ1Q9ULJ6 1067 aa7.33□□□□□ -1.24
VARS-222ENST00000470953 LOC400499M0QZD8 3231 aa7.33□□□□□ -1.24
VARS-222ENST00000470953 CEP295Q9C0D2 2601 aa7.32□□□□□ -1.24
VARS-222ENST00000470953 WDFY3Q8IZQ1 3526 aa7.32□□□□□ -1.24
VARS-222ENST00000470953 RALGAPA2Q2PPJ7 1873 aa7.32□□□□□ -1.24
VARS-222ENST00000470953 MROH7Q68CQ1 1323 aa7.32□□□□□ -1.24
VARS-222ENST00000470953 SLC15A5A6NIM6 579 aa7.32□□□□□ -1.24
VARS-222ENST00000470953 USP17L5A8MUK1 530 aa7.32□□□□□ -1.24
VARS-222ENST00000470953 LTBRP36941 435 aa7.32□□□□□ -1.24
VARS-222ENST00000470953 BACE1P56817 501 aa7.32□□□□□ -1.24
VARS-222ENST00000470953 GRB14Q14449 540 aa7.32□□□□□ -1.24
VARS-222ENST00000470953 CAVIN4Q5BKX8 364 aa7.32□□□□□ -1.24
VARS-222ENST00000470953 HERC6Q8IVU3 1022 aa7.32□□□□□ -1.24
VARS-222ENST00000470953 FAM126BQ8IXS8 530 aa7.32□□□□□ -1.24
VARS-222ENST00000470953 VGLL2Q8N8G2 317 aa7.32□□□□□ -1.24
VARS-222ENST00000470953 CLDND1Q9NY35 253 aa7.32□□□□□ -1.24
VARS-222ENST00000470953 LHX6Q9UPM6 363 aa7.32□□□□□ -1.24
VARS-222ENST00000470953 PTPRSQ13332 1948 aa7.32□□□□□ -1.24
VARS-222ENST00000470953 TEP1Q99973 2627 aaKnown RBP7.31□□□□□ -1.24
VARS-222ENST00000470953 TAF4O00268 1085 aa7.31□□□□□ -1.24
VARS-222ENST00000470953 TBC1D12O60347 775 aa7.31□□□□□ -1.24
VARS-222ENST00000470953 PROS1P07225 676 aa7.31□□□□□ -1.24
VARS-222ENST00000470953 RARBP10826 455 aa7.31□□□□□ -1.24
VARS-222ENST00000470953 CAP2P40123 477 aa7.31□□□□□ -1.24
VARS-222ENST00000470953 RING1Q06587 406 aa7.31□□□□□ -1.24
VARS-222ENST00000470953 DLX2Q07687 328 aaPredicted RBP7.31□□□□□ -1.24
VARS-222ENST00000470953 COL19A1Q14993 1142 aa7.31□□□□□ -1.24
VARS-222ENST00000470953 CCDC27Q2M243 656 aa7.31□□□□□ -1.24
VARS-222ENST00000470953 NCBP3Q53F19 620 aaKnown RBP7.31□□□□□ -1.24
VARS-222ENST00000470953 WWC1Q8IX03 1113 aa7.31□□□□□ -1.24
VARS-222ENST00000470953 LINS1Q8NG48 757 aa7.31□□□□□ -1.24
VARS-222ENST00000470953 CYP2W1Q8TAV3 490 aa7.31□□□□□ -1.24
VARS-222ENST00000470953 NUP133Q8WUM0 1156 aa7.31□□□□□ -1.24
VARS-222ENST00000470953 SCLYQ96I15 445 aa7.31□□□□□ -1.24
VARS-222ENST00000470953 SLC9A7Q96T83 725 aa7.31□□□□□ -1.24
VARS-222ENST00000470953 OSBPL5Q9H0X9 879 aaPredicted RBP7.31□□□□□ -1.24
VARS-222ENST00000470953 HIPK3Q9H422 1215 aa7.31□□□□□ -1.24
VARS-222ENST00000470953 MYH16Q9H6N6 1097 aa7.31□□□□□ -1.24
VARS-222ENST00000470953 BTBD7Q9P203 1132 aa7.31□□□□□ -1.24
VARS-222ENST00000470953 SIP14410 1827 aa7.31□□□□□ -1.24
VARS-222ENST00000470953 ATAD5Q96QE3 1844 aa7.31□□□□□ -1.24
VARS-222ENST00000470953 IL16Q14005 1332 aa7.3□□□□□ -1.24
VARS-222ENST00000470953 FANCIQ9NVI1 1328 aa7.3□□□□□ -1.24
VARS-222ENST00000470953 LOC730098B7Z3J9 87 aa7.3□□□□□ -1.24
VARS-222ENST00000470953 COBLO75128 1261 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms