RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 SV2BQ7L1I2 683 aa4.39□□□□□ -1.71
UBXN4-206ENST00000470687 HDXQ7Z353 690 aa4.39□□□□□ -1.71
UBXN4-206ENST00000470687 HID1Q8IV36 788 aa4.39□□□□□ -1.71
UBXN4-206ENST00000470687 OXR1Q8N573 874 aa4.39□□□□□ -1.71
UBXN4-206ENST00000470687 XAGE3Q8WTP9 111 aa4.39□□□□□ -1.71
UBXN4-206ENST00000470687 NOC4LQ9BVI4 516 aaKnown RBP4.39□□□□□ -1.71
UBXN4-206ENST00000470687 DUSP15Q9H1R2 295 aaPredicted RBP4.39□□□□□ -1.71
UBXN4-206ENST00000470687 TMPRSS5Q9H3S3 457 aa4.39□□□□□ -1.71
UBXN4-206ENST00000470687 POLR3KQ9Y2Y1 108 aaPredicted RBP4.39□□□□□ -1.71
UBXN4-206ENST00000470687 LAMC3Q9Y6N6 1575 aa4.39□□□□□ -1.71
UBXN4-206ENST00000470687 SASH1O94885 1247 aa4.38□□□□□ -1.71
UBXN4-206ENST00000470687 F13A1P00488 732 aa4.38□□□□□ -1.71
UBXN4-206ENST00000470687 PI3P19957 117 aa4.38□□□□□ -1.71
UBXN4-206ENST00000470687 FAM160A1Q05DH4 1040 aa4.38□□□□□ -1.71
UBXN4-206ENST00000470687 CDH24Q86UP0 819 aa4.38□□□□□ -1.71
UBXN4-206ENST00000470687 NT5DC4Q86YG4 428 aa4.38□□□□□ -1.71
UBXN4-206ENST00000470687 Q96M66 194 aa4.38□□□□□ -1.71
UBXN4-206ENST00000470687 TINF2Q9BSI4 451 aa4.38□□□□□ -1.71
UBXN4-206ENST00000470687 ACBD3Q9H3P7 528 aa4.38□□□□□ -1.71
UBXN4-206ENST00000470687 CYP8B1Q9UNU6 501 aa4.38□□□□□ -1.71
UBXN4-206ENST00000470687 TTF2Q9UNY4 1162 aaKnown RBP4.38□□□□□ -1.71
UBXN4-206ENST00000470687 PDE6BP35913 854 aa4.37□□□□□ -1.71
UBXN4-206ENST00000470687 EGR3Q06889 387 aa4.37□□□□□ -1.71
UBXN4-206ENST00000470687 WIPI1Q5MNZ9 446 aaPredicted RBP4.37□□□□□ -1.71
UBXN4-206ENST00000470687 ERICH6BQ5W0A0 696 aa4.37□□□□□ -1.71
UBXN4-206ENST00000470687 TTBK2Q6IQ55 1244 aa4.37□□□□□ -1.71
UBXN4-206ENST00000470687 PANK1Q8TE04 598 aa4.37□□□□□ -1.71
UBXN4-206ENST00000470687 TMEM74Q96NL1 305 aa4.37□□□□□ -1.71
UBXN4-206ENST00000470687 TRIT1Q9H3H1 467 aaKnown RBP4.37□□□□□ -1.71
UBXN4-206ENST00000470687 DUSP13Q9UII6 198 aa4.37□□□□□ -1.71
UBXN4-206ENST00000470687 CADPSQ9ULU8 1353 aa4.37□□□□□ -1.71
UBXN4-206ENST00000470687 MINDY4BA8MYZ0 360 aa4.36□□□□□ -1.71
UBXN4-206ENST00000470687 SCAMP3O14828 347 aaKnown RBP4.36□□□□□ -1.71
UBXN4-206ENST00000470687 TCF3P15923 654 aa4.36□□□□□ -1.71
UBXN4-206ENST00000470687 AFF3P51826 1226 aaKnown RBP4.36□□□□□ -1.71
UBXN4-206ENST00000470687 CAMK2GQ13555 558 aaPredicted RBP4.36□□□□□ -1.71
UBXN4-206ENST00000470687 CCDC85BQ15834 202 aaPredicted RBP4.36□□□□□ -1.71
UBXN4-206ENST00000470687 FEZF2Q8TBJ5 459 aa4.36□□□□□ -1.71
UBXN4-206ENST00000470687 DACT3Q96B18 629 aaPredicted RBP4.36□□□□□ -1.71
UBXN4-206ENST00000470687 SIGLEC10Q96LC7 697 aa4.36□□□□□ -1.71
UBXN4-206ENST00000470687 METTL5Q9NRN9 209 aaKnown RBP4.36□□□□□ -1.71
UBXN4-206ENST00000470687 UBP1Q9NZI7 540 aa4.36□□□□□ -1.71
UBXN4-206ENST00000470687 GPR160Q9UJ42 338 aa4.36□□□□□ -1.71
UBXN4-206ENST00000470687 SNCAIPQ9Y6H5 919 aa4.36□□□□□ -1.71
UBXN4-206ENST00000470687 SLC22A31A6NKX4 558 aa4.35□□□□□ -1.71
UBXN4-206ENST00000470687 CILPO75339 1184 aa4.35□□□□□ -1.71
UBXN4-206ENST00000470687 GRK4P32298 578 aa4.35□□□□□ -1.71
UBXN4-206ENST00000470687 ZNF76P36508 570 aa4.35□□□□□ -1.71
UBXN4-206ENST00000470687 ETV3P41162 512 aa4.35□□□□□ -1.71
UBXN4-206ENST00000470687 LMNB2Q03252 620 aa4.35□□□□□ -1.71
UBXN4-206ENST00000470687 SNX17Q15036 470 aa4.35□□□□□ -1.71
UBXN4-206ENST00000470687 NPM2Q86SE8 214 aaKnown RBP4.35□□□□□ -1.71
UBXN4-206ENST00000470687 TSPYL5Q86VY4 417 aaPredicted RBP4.35□□□□□ -1.71
UBXN4-206ENST00000470687 DHX38Q92620 1227 aaKnown RBP4.35□□□□□ -1.71
UBXN4-206ENST00000470687 SHISA4Q96DD7 197 aa4.35□□□□□ -1.71
UBXN4-206ENST00000470687 DPH2Q9BQC3 489 aaPredicted RBP4.35□□□□□ -1.71
UBXN4-206ENST00000470687 GPR62Q9BZJ7 368 aa4.35□□□□□ -1.71
UBXN4-206ENST00000470687 GPATCH2Q9NW75 528 aa4.35□□□□□ -1.71
UBXN4-206ENST00000470687 MBD1Q9UIS9 605 aaPredicted RBP4.35□□□□□ -1.71
UBXN4-206ENST00000470687 PCDHA11Q9Y5I1 949 aa4.35□□□□□ -1.71
UBXN4-206ENST00000470687 CORINQ9Y5Q5 1042 aa4.35□□□□□ -1.71
UBXN4-206ENST00000470687 IRAK3Q9Y616 596 aa4.35□□□□□ -1.71
UBXN4-206ENST00000470687 LTKP29376 864 aa4.34□□□□□ -1.71
UBXN4-206ENST00000470687 GALK1P51570 392 aa4.34□□□□□ -1.71
UBXN4-206ENST00000470687 RPS26P62854 115 aaKnown RBP4.34□□□□□ -1.71
UBXN4-206ENST00000470687 CHRNEQ04844 493 aa4.34□□□□□ -1.71
UBXN4-206ENST00000470687 EFEMP1Q12805 493 aa4.34□□□□□ -1.71
UBXN4-206ENST00000470687 ZXDCQ2QGD7 858 aaPredicted RBP4.34□□□□□ -1.71
UBXN4-206ENST00000470687 SPPL2CQ8IUH8 684 aa4.34□□□□□ -1.71
UBXN4-206ENST00000470687 MRPL41Q8IXM3 137 aaKnown RBP4.34□□□□□ -1.71
UBXN4-206ENST00000470687 DNAJB8Q8NHS0 232 aa4.34□□□□□ -1.71
UBXN4-206ENST00000470687 ZNF296Q8WUU4 475 aaPredicted RBP4.34□□□□□ -1.71
UBXN4-206ENST00000470687 TEPSINQ96N21 525 aa4.34□□□□□ -1.71
UBXN4-206ENST00000470687 ANTXR1Q9H6X2 564 aa4.34□□□□□ -1.71
UBXN4-206ENST00000470687 EBF1Q9UH73 591 aa4.34□□□□□ -1.71
UBXN4-206ENST00000470687 GGT7Q9UJ14 662 aa4.34□□□□□ -1.71
UBXN4-206ENST00000470687 OR14I1A6ND48 311 aa4.33□□□□□ -1.72
UBXN4-206ENST00000470687 PSPNO60542 156 aa4.33□□□□□ -1.72
UBXN4-206ENST00000470687 EIF4A3P38919 411 aaKnown RBP4.33□□□□□ -1.72
UBXN4-206ENST00000470687 GJA8P48165 433 aa4.33□□□□□ -1.72
UBXN4-206ENST00000470687 EPHB3P54753 998 aa4.33□□□□□ -1.72
UBXN4-206ENST00000470687 SPATS1Q496A3 300 aa4.33□□□□□ -1.72
UBXN4-206ENST00000470687 SP8Q8IXZ3 490 aa4.33□□□□□ -1.72
UBXN4-206ENST00000470687 ZDHHC14Q8IZN3 488 aa4.33□□□□□ -1.72
UBXN4-206ENST00000470687 ANKS4BQ8N8V4 417 aa4.33□□□□□ -1.72
UBXN4-206ENST00000470687 DTWD2Q8NBA8 298 aa4.33□□□□□ -1.72
UBXN4-206ENST00000470687 RNF34Q969K3 372 aa4.33□□□□□ -1.72
UBXN4-206ENST00000470687 ADAM7Q9H2U9 754 aa4.33□□□□□ -1.72
UBXN4-206ENST00000470687 EPB41L4AQ9HCS5 686 aaPredicted RBP4.33□□□□□ -1.72
UBXN4-206ENST00000470687 TJP2Q9UDY2 1190 aa4.33□□□□□ -1.72
UBXN4-206ENST00000470687 PRR36Q9H6K5 1346 aa4.32□□□□□ -1.72
UBXN4-206ENST00000470687 E9PSI1 815 aa4.32□□□□□ -1.72
UBXN4-206ENST00000470687 HRKO00198 91 aa4.32□□□□□ -1.72
UBXN4-206ENST00000470687 GBP2P32456 591 aaPredicted RBP4.32□□□□□ -1.72
UBXN4-206ENST00000470687 SRSF3P84103 164 aaKnown RBP4.32□□□□□ -1.72
UBXN4-206ENST00000470687 CLCQ05315 142 aa4.32□□□□□ -1.72
UBXN4-206ENST00000470687 PAK2Q13177 524 aa4.32□□□□□ -1.72
UBXN4-206ENST00000470687 VMACQ2NL98 169 aa4.32□□□□□ -1.72
UBXN4-206ENST00000470687 ADGRF1Q5T601 910 aa4.32□□□□□ -1.72
UBXN4-206ENST00000470687 FAM196AQ6ZSG2 479 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms